Motif finder

Task #1019 - a1157617

Status Start End Updated Duration Sequences Logs Task Bundle
finished 15 days ago 15 days ago 15 days ago 4 minutes (265sec) Positive, Negative Float, Integer Open

Results

Show locations
Motif Occurrence(%) Expected(%) Chi2
GCTGGTTK 9.0 0.735816 92.8177
YCWGAGGR 18.0 2.91107 78.2104
TCTAMCGC 8.0 0.735816 71.7141
AAGCAAGC 5.0 0.368585 58.1956
GGAAACCG 5.0 0.368585 58.1956
AATAAGWG 7.0 0.735816 53.3285
ATAKTTCC 7.0 0.735816 53.3285
ATKCGCTG 7.0 0.735816 53.3285
AGSAAATA 7.0 0.735816 53.3285
TGYAAACC 7.0 0.735816 53.3285
WAAACCAG 7.0 0.735816 53.3285
GRGCTTGC 7.0 0.735816 53.3285
CTCTGGYG 7.0 0.735816 53.3285
CATKGSKG 15.0 2.91107 50.2022
TSGTATTW 10.0 1.46624 49.6679
CAGAGGRR 10.0 1.46624 49.6679
TVTTCSCG 12.0 2.19131 43.9054
CCAATGGV 8.0 1.1017 43.1938
KAGRAYCG 14.0 2.91107 42.2403
KAKATTTS 14.0 2.91107 42.2403
AAATWTRT 9.0 1.46624 38.7096
AATACSAM 9.0 1.46624 38.7096
AARCCGCR 9.0 1.46624 38.7096
AACCAGCN 9.0 1.46624 38.7096
AWYCGCGA 9.0 1.46624 38.7096
AGSCTTSC 9.0 1.46624 38.7096
TAGSATRC 9.0 1.46624 38.7096
TGAKGGSA 9.0 1.46624 38.7096
TCSCGCGR 9.0 1.46624 38.7096
WYCCATTG 9.0 1.46624 38.7096
GACKKGTG 9.0 1.46624 38.7096
GAMTCGGS 9.0 1.46624 38.7096
GTTYTWAC 9.0 1.46624 38.7096
CTGAGGRK 9.0 1.46624 38.7096
ATGMAAGT 6.0 0.735816 37.6611
AGGTATAW 6.0 0.735816 37.6611
AGCAAGCY 6.0 0.735816 37.6611
AKTGACTA 6.0 0.735816 37.6611
TTGCTRCA 6.0 0.735816 37.6611
TGCRTCGA 6.0 0.735816 37.6611
TGSTCAAG 6.0 0.735816 37.6611
GCGGYTTG 6.0 0.735816 37.6611
CCATTGGR 6.0 0.735816 37.6611
CCTCWGRD 17.0 4.3348 37.0046
WCATTSKG 13.0 2.91107 34.9653
GGASCKWG 13.0 2.91107 34.9653
GCVSGRRG 25.0 8.48244 32.1641
AWYATRYM 30.0 11.1475 31.8829
RGRAYCGN 30.0 11.1475 31.8829
ATABGACC 7.0 1.1017 31.5784
TTCCCCDG 7.0 1.1017 31.5784
DTCTAACG 7.0 1.1017 31.5784
ACYMGDGA 16.0 4.3348 31.3917
ABGACRTK 16.0 4.3348 31.3917
WKGCRKCG 19.0 5.73774 30.6545
YTRTTMGS 19.0 5.73774 30.6545

Parameters

Positive sequences Open Contrast sequences Open Statistic parameters Add first run - exclude sequence if motif found
parameters in ini format

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