Motif finder

Task #1268 - e4fddd55

Status Start End Updated Duration Sequences Logs Task Bundle
find motif weights: 31 6 days ago 6 days ago 7 minutes (433sec) Positive, Negative Float, Integer Open

Results

Show locations
Motif Occurrence(%) Expected(%) Chi2
TRTTKACW 39.0697 4.6029 29574.5
GTMAACAN 33.2926 4.6029 20491.2
AAARHAAA 27.8209 3.47238 19564.4
AARHAAAY 34.4009 6.82448 12768.9
ARCAAACA 12.3484 1.17109 12224.5
YAAACARV 33.79 6.82448 12209.4
AAACARRR 24.9062 4.6029 10262.4
RMAMACAR 35.1776 8.99446 8734.03
MAVAGMAR 42.4732 13.1844 7455.75
TTTWTTTV 17.6019 3.47238 6588.31
TGTTTWYY 20.7697 4.6029 6506.74
ASAGVMAR 39.9162 13.1844 6210.79
TGTGTKTR 13.3956 2.32849 6027.53
MACAVAGN 39.0174 13.1844 5800.13
TTKACWBW 38.8079 13.1844 5706.47
DGVCAVAG 41.6878 14.7055 5673.16
AVARRGMA 38.6945 13.1844 5656.05
MAGVMARR 58.7748 24.6343 5421.8
TGNYTBTG 37.9091 13.1844 5313.13
CTGDSCTB 31.5647 10.0605 5267.16
GTTKACWB 24.4 6.82448 5186.75
AGVAVARA 30.5524 10.0605 4782.93
AGSCWGGV 23.4226 6.82448 4625.9
AMACAVCH 30.1859 10.0605 4613.37
GTAAATAD 10.0445 1.75149 4499.51
GTGTKTGY 11.8422 2.32849 4454.24
ACAVAGDB 38.2756 14.7055 4329.04
ARAGKHCA 22.6721 6.82448 4217.03
GGSWGRRG 26.9744 8.99446 4118.6
AAYAAAWA 11.4321 2.32849 4078.45
GAGVMARR 34.846 13.1844 4078.21

Parameters

Positive sequences Open Contrast sequences Open Statistic parameters Add first run - exclude sequence if motif found
parameters in ini format

Motif search tool