Motif finder

Task #1269 - ee4098c3

Status Start End Updated Duration Sequences Logs Task Bundle
find motif weights: 25 4 days ago 4 days ago 7 minutes (432sec) Positive, Negative Float, Integer Open

Results

Show locations
Motif Occurrence(%) Expected(%) Chi2
TRTTKACW 39.0697 4.6029 29574.5
AAAAHAAA 12.1651 1.75149 7094.85
TGTTTRYY 13.0465 4.6029 1774.89
RGGSWGRG 11.4321 8.99446 75.7003
GTMAACAN 33.2926 4.6029 20491.2
AARHAAAY 34.4009 6.82448 12768.9
YAAACARV 33.79 6.82448 12209.4
AAASHAAA 21.1886 3.47238 10357.7
AMAMASAR 36.2946 8.99446 9495.15
MAVAGMAR 42.4732 13.1844 7455.75
TTKTTTTV 17.8899 3.47238 6859.61
AMACARSM 31.3291 8.99446 6355.2
ASAGVMAR 39.9162 13.1844 6210.79
TGTGTKTR 13.3956 2.32849 6027.53
AAANAAAG 13.1861 2.32849 5801.55
MACAVAGN 39.0174 13.1844 5800.13
TTKACWBW 38.8079 13.1844 5706.47
MAGVMARR 58.7748 24.6343 5421.8
TGNYYTTK 45.5624 17.1818 5371.82
CTGDSCTB 31.5647 10.0605 5267.16
GTTKACWB 24.4 6.82448 5186.75
AGRAVAVA 30.9538 10.0605 4972.16
KSAVASAG 36.3993 13.1844 4684.08
GTAAATAD 10.0445 1.75149 4499.51
GTGTKTGY 11.8422 2.32849 4454.24

Parameters

Positive sequences Open Contrast sequences Open Statistic parameters Add first run - exclude sequence if motif found
parameters in ini format

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