Motif finder

Task #2146 - 70.fst, group: good240_0_99b8c0__81c50758

Status Start End Updated Duration Sequences Logs Task Bundle
finished 4 years ago 4 years ago 4 years ago 4 hours (15629sec) Positive, Negative Float, Integer, Open

Results

Motif Occurrence(%) Expected(%) -log10(Binomial prob)
CGATCNGN 33.78 5.73774 1587.33
CNGATCGN 33.56 5.73774 1567.06
GATCNGNN 43.34 21.057 544.473
DGATCGNN 34.8 16.2481 443.954
GATCGHNN 32.71 16.2481 356.505
ATCGGNNN 30.82 21.057 114.913
ATCHGBNV 41.16 32.9098 66.6525
ATCGHVBN 40.87 32.9098 62.2575
CGATCGHV 6.51 3.26897 58.1798
TCGGRVNN 34.66 29.8653 25.2489
ATCHGNNT 20.08 16.2481 24.1092
ATCGHNAN 19.82 16.2481 21.279
TCNNNATC 24.11 21.057 13.8066
ATCHGAVV 11.72 9.49105 13.6771
TCRGYBHV 36.37 32.9098 13.6616
TCHGGBHN 36.09 32.9098 11.8749
ATCGYTBB 8.09 6.4315 11.0549
ADCKATYG 5.68 4.3348 10.4265
CGKKRCRR 13.13 11.1475 10.1338
TCGVYDGD 20.27 18.0847 8.79703

Parameters

Search parameters Motif filtering Positive sequences Open Contrast sequences Open Statistic parameters Add first run - exclude sequence if motif found
parameters in ini format

Motif search tool