Motif finder

Task #3632 - 012ee298

Status Start End Updated Duration Sequences Logs Task Bundle
finished 6 months ago 6 months ago 6 months ago 15 minutes (957sec) Positive, Negative Float, Integer, Tomtom Open

Results

Motif Occurrence(%) Expected(%) -log10(Binomial prob)
DNHNVCAS 54.2595 27.3854 188.34
DVWRCAMN 28.8441 9.88524 165.229
MAVCAHDD 20.6433 5.42171 160.224
CMVWVNRN 59.3496 33.7917 159.293
DRCMCTDB 17.7801 4.473 142.122
DRSMASYD 27.3948 10.5959 126.254
RSAMHNYN 44.9982 25.4745 101.444
AHCANDNH 30.3641 15.0922 83.3065
ADGRMASB 10.5338 2.62602 78.7704
MCHSHARR 14.0332 4.62616 73.7537
AVANGRAA 5.33758 0.796437 62.2608
MTVTRMAR 7.91799 2.05995 53.2363
BMMCMRRN 22.6935 11.5954 51.8881
WVARGWAG 5.33758 0.982457 50.661
CARVMDCD 10.357 3.45723 49.9884
DGYARAMH 8.8017 2.74642 45.9329
AWACHDCY 5.76175 1.31957 42.9872
AVVRVCAW 9.65005 3.43011 40.746
WSWKARCH 10.5691 4.00102 40.2839
ASBVCCTS 5.58501 1.30795 40.1834
AKRNAGKM 8.02404 2.67221 36.4735
BKMMCARN 14.2807 6.66267 36.1149
GVARGSSM 5.97384 1.64179 34.7234
SKRAMCAN 6.96359 2.16821 34.3482
MADGRADB 10.3924 4.19227 34.2547
VMANTCAN 9.11983 3.50288 32.2347
AMAKYRSW 7.24638 2.53448 29.0146
DAGKGSAV 5.19618 1.48031 27.3069
CASMTDGD 5.23153 1.51653 26.7434
HAAHMMTS 7.31707 2.6837 26.5678
MMASCTRV 5.37292 1.62688 25.6508
WMWCAGHH 7.35242 2.79924 24.5621
WVMAMDGR 10.9933 5.17553 24.4719
RNDGMCCH 10.6045 4.98687 23.3143
CTCARWHN 5.7971 1.96199 22.8953
WRMAKGSM 6.61011 2.45036 22.5144
GSYCCNCD 5.19618 1.68927 21.3264
CASVGMYV 6.25663 2.32958 20.5894
CMTNCAMB 5.05479 1.70066 19.0414
CASWAVYB 6.57476 2.61137 18.8024
ARGCNCWB 5.09014 1.7716 17.8116
AABVTVCW 5.76175 2.16659 17.7805
KYAGDADS 7.35242 3.23281 16.6019
KKCAGWKV 5.8678 2.30367 16.308
DTYNACCR 5.33758 1.99712 16.0099
DCAGDCYV 5.30223 1.9976 15.5565
CMRSKVAS 7.03429 3.14983 14.5657
RDGCMANR 7.28172 3.36744 13.7716
RARWSMCM 5.16083 2.01582 13.4516
KMCAGBMD 6.04454 2.71393 11.1059
GRKNGDAG 5.30223 2.24295 10.8946
RAWMASYR 5.33758 2.29917 10.325
DYMARAHG 5.90315 2.74642 9.18198
DCAAGKNH 6.11524 2.90616 8.95932
GBYCARHM 5.72641 2.64426 8.93068
GNAGMDCH 5.76175 2.68766 8.64316
WAGKAKRH 5.05479 2.25152 8.09754
TBHAMCMW 5.93849 2.88585 7.55996
ACMYDGBM 5.51432 2.59584 7.5452
AGBAVBMM 6.99894 3.66941 7.1556
AVNYCABC 5.09014 2.38871 6.38522
CRKSMCMN 7.49381 4.10928 6.293
AKYCHVVA 7.10498 3.90225 5.4262
KMCAMTVH 5.47897 2.78428 4.70637
YSACMRYD 6.43337 3.47436 4.69437
BCAKCABN 5.30223 2.67143 4.55516
RWWRTCMM 5.23153 2.64666 4.23997
TGVMADNC 5.54966 2.90642 3.84596
RCWKRRAK 5.30223 2.74154 3.69491
TSTMMARN 5.40827 2.83108 3.53642
DSCMTVRG 5.47897 2.88912 3.4552
KWGAVRGV 5.62036 3.05468 2.75944

Parameters

Search parameters Motif filtering Positive sequences Open Contrast sequences Open Statistic parameters Add first run - exclude sequence if motif found
parameters in ini format

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