Motif finder

Task #3646 - a36b1d4f

Status Start End Updated Duration Sequences Logs Task Bundle
finished 5 months ago 5 months ago 5 months ago 14 minutes (846sec) Positive, Negative Float, Integer, Tomtom Open

Results

Motif Occurrence(%) Expected(%) -log10(Binomial prob)
RCSAATSR 54.18 11.7987 1134.25
ATTSGHYV 62.52 17.9047 1051.91
RRCSAATV 59.24 15.873 1045.25
CSAATSRV 60.9 18.8879 921.079
DRGGYGGG 54.94 20.9371 593.205
RGGYGGGR 45.84 15.4225 552.547
GGYGGGRC 30.38 7.34678 496.781
RKRGGCGG 40.9 15.013 416.304
TNYGAWTG 25.98 6.47043 400.579
AATBARMR 32.2 11.438 322.775
TTGGHTRN 40.06 17.3499 302.124
GCGGGRCB 25.22 9.76586 206.838
DRKGGGCG 33.16 15.8749 188.875
ATTWRCAT 6.2 0.636634 181.254
RGGYSGAG 22.84 9.69383 153.722
RKGSGTGG 21.58 9.13665 144.215
GGCSGWGC 13.96 4.4263 144.093
CAMTCARS 18.0 7.54488 118.401
TWATTBRY 14.24 5.26477 114.527
KGSGCRTG 15.18 6.02813 107.906
CGGGRCBK 22.92 11.5012 104.186
RCCRATAG 8.78 2.4864 100.542
RGKAKGBG 33.52 20.3051 95.3416
GCGCABGC 8.16 2.26991 94.8966
TYYYATTG 17.0 7.73637 92.109
TGGMTRND 42.7 28.6808 88.881
YTWATTBR 15.32 6.76684 87.0701
GTSACRTV 11.48 4.3283 85.9758
TCSRCCYM 24.06 13.2219 84.9728
ATNMRAAH 21.62 11.4155 83.7036
TRATTSGA 6.82 1.79471 83.5441
CGCANGCG 7.12 2.00297 80.0408
ACTTCCGK 5.44 1.22136 78.9303
RGGBASGG 21.66 11.8033 76.104
GATTSGAY 6.5 1.76272 75.9423
GGYGTGGY 11.82 4.89052 73.7958
TTGGHCRR 18.6 9.65317 72.7367
TGTMDNTM 22.32 12.5769 70.8612
TGANYGAC 8.46 2.928 70.3959
GATYSGTR 7.12 2.21223 68.9715
AVHGRMAG 38.84 26.6268 68.7759
GGATHGGY 10.58 4.32449 66.3671
GCGKWGCB 17.56 9.18235 66.1036
AAYWAMRD 21.22 12.0137 65.2167
GARGSMGG 24.1 14.3065 65.0409
GGGNNTGG 32.82 21.6027 64.9492
AYGTSACY 8.82 3.35343 62.0286
TDCAAAYN 13.28 6.30068 61.3667
TGACRTMA 5.22 1.38011 61.1177
CSAATAGN 11.5 5.1483 59.6036
CGGAAGTV 6.78 2.2433 58.7214
RGGYGKGY 29.26 19.063 57.5219
GGHGGGGD 26.26 16.539 57.4744
ATTNNCAT 10.54 4.59768 57.0477
AWVRCAAV 19.0 10.8839 54.0282
DAAYWAAV 16.56 9.01876 53.8574
GGGNNCGG 24.68 15.6515 51.0216
AHCYGGAA 8.68 3.63529 49.489
TTSGYTCN 18.96 11.1702 48.4189
TTRHATWH 10.94 5.2524 46.6605
GSAWRYGD 26.88 17.8597 46.0314
GYGTGKCY 13.24 7.01826 44.082
ACGCCCMY 8.76 3.96456 41.3684
HRGCAASN 29.24 20.2842 41.1634
AYGAWTGG 5.76 2.09052 40.6207
WGCGHDCG 9.6 4.59076 39.9665
ATTBGYYT 12.12 6.41493 39.4721
AWKCRYAN 22.52 14.6746 39.2345
RGCAASNR 23.22 15.2775 39.0352
AMTCARGW 8.96 4.2446 37.5703
AATTSGYT 5.36 1.95615 36.7104
RYAARSAH 21.98 14.545 34.9103
GRAGGGGC 9.26 4.59679 34.1064
GCRMGCKC 10.82 5.7675 33.1334
GGGACTTB 6.34 2.67656 32.6883
RGAKSGMG 23.4 16.0054 31.7483
ATYSGTRV 11.84 6.60254 31.7019
TCMAGKYH 20.06 13.1798 31.6919
TCABTCAH 7.74 3.67022 30.9322
AATVGRAA 7.16 3.3105 30.0307
MAAGATGS 4.72 1.75344 30.0307
AABATGGC 3.94 1.30868 29.8878
WGKGKGTG 12.24 7.01107 29.831
CTTMCGGV 8.76 4.45714 29.2352
RSAARGSR 36.04 27.5482 29.1715
CGRRKKCG 12.48 7.24875 28.9201
BTTGYTWV 17.42 11.2223 28.5855
TGSGYAGD 12.88 7.62596 27.8181
TDCMDKTC 21.34 14.5789 27.734
ADAATWHA 7.32 3.51196 27.6923
WWTWCAAR 7.82 3.86497 27.5707
TMAAVATR 5.86 2.54203 27.4448
CGTYACKN 7.6 3.72753 27.1827
GGWSGAGB 20.58 14.012 26.7739
CGGWGCYD 15.06 9.42873 26.7515
GGCHGGRH 28.56 20.9933 26.7375
VAATKAGV 14.78 9.241 26.2006
WYDCWAAS 19.16 12.8599 26.1633
TSGCTRBC 15.2 9.61994 25.6465
RKGGGAGG 13.8 8.52249 25.1983
GGCGKGYC 11.1 6.42251 24.8824
ATSARMGH 15.44 9.90465 24.4197
ATGACGWM 2.78 0.806163 24.2099
TATBYATW 3.72 1.32355 24.0097
CTGGGMDD 30.26 22.8512 23.6366
AATBARMT 8.68 4.6758 23.4789
AMTVRCTG 12.8 7.87931 22.9032
ARGVHSGA 30.22 22.9401 22.4978
GSAAGTNC 9.12 5.06957 22.2122
ACWACRAM 3.62 1.31353 22.1176
TCACRTGR 5.08 2.22135 22.0342
TARCATHW 4.94 2.13416 21.927
ACGKCACR 3.04 1.02164 20.5088
ATVRRAWG 14.42 9.41794 19.8006
KCKTMCGG 6.82 3.53068 19.249
GCTGSGMD 20.52 14.6637 19.0
YMGGYADS 23.96 17.6977 18.9216
GGNCGGTG 5.7 2.76414 18.7325
AVYGAWTG 8.96 5.15 18.6456
AWYAAGDW 10.56 6.39822 18.5176
WCRRANSC 37.2 29.9239 18.293
GTARTTHN 7.38 4.00906 17.8292
TGACWGGY 6.58 3.42924 17.7592
RGCCTATV 5.42 2.61659 17.6397
RKBCTGGG 21.84 16.0105 17.1269
AYYNACCA 11.9 7.56882 17.0655
RGKWMGWR 29.86 23.2535 17.0073
RGRCARAG 12.6 8.19534 16.317
CGTSRYCD 15.2 10.3556 16.3166
TCYGGGWH 13.34 8.8336 15.9526
TTRYYWTD 18.44 13.1643 15.8886
GVGCRAGS 14.56 9.85626 15.876
GRMMGAKR 24.54 18.5566 15.8476
TYKGTCYV 19.32 13.9549 15.6339
TGGGGYSG 8.58 5.04298 15.5843
ANWTGTAG 4.76 2.25308 15.4791
CCABTCAV 10.22 6.33733 15.4489
RDAGGTRG 14.06 9.55576 14.5096
KGYWTSYK 36.48 29.8572 13.839
TGTKTAYW 4.56 2.18639 13.7628
KMRCTSRG 27.92 21.8941 13.6697
AATKASGW 5.08 2.55417 13.6098
GGRAKKAG 14.0 9.60049 13.4384
WCGTSATC 2.82 1.07363 13.4078
RGVWAAKR 31.18 24.9485 13.3598
AYTTRAAR 5.26 2.7131 12.9318
RSAWRCYR 33.5 27.2053 12.7349
AAVNGAMA 16.16 11.5108 12.7131
GASDAVGR 28.96 23.0161 12.4346
AATGTAGT 1.2 0.247425 12.3389
MWAATGAR 5.8 3.14298 12.1545
GCCTATVR 5.06 2.61569 11.9748
GAKKGGGY 14.34 10.0271 11.9434
ANACWACA 4.66 2.33493 11.9194
SCRGRTCB 18.06 13.2486 11.8872
GYCGHDCG 7.62 4.53409 11.8823
KACGSAHG 5.1 2.66736 11.4974
ARTTTMRA 4.42 2.19094 11.38
WGTGYGYW 8.98 5.64612 11.2803
GTGGGRYN 18.04 13.3038 11.2261
TBTGASTG 6.66 3.8423 11.1517
TRRGAWMB 23.56 18.2436 11.1406
GCGHRCGD 9.94 6.4433 10.9763
AAARAAAA 4.0 1.92861 10.7204
GMGCDHCG 12.64 8.72978 10.4219
RAAGHGAV 16.56 12.1012 10.3772
TBCTGGGW 10.36 6.84002 10.3138
KCAAGAMH 7.86 4.83247 10.2188
ATAGGCYR 3.86 1.86121 10.0336
ATTMAYTW 3.06 1.32806 10.0249
TATDTAMC 2.0 0.684372 10.006
TMCGGTYB 5.6 3.11263 9.97064
KYGCGCAS 7.22 4.35965 9.79071
AGYGASKS 12.9 9.01134 9.77048
TATSGCGA 1.18 0.272362 9.71204
GGYGSGAK 12.56 8.73441 9.65316
WAATTMYN 9.5 6.1904 9.64944
ATNGRCAG 7.98 4.97501 9.54384
ACABMSAC 8.56 5.43825 9.54294
ACSGYCCM 7.16 4.33302 9.48797
TTMRGKWW 12.66 8.84317 9.40183
CGCGCANG 4.42 2.28133 9.40179
DAGGBGTG 11.26 7.67511 9.28169
TRCATAHN 5.32 2.95182 9.11368
RVCTKGAG 16.28 12.0175 8.92337
TGAWTGGG 4.72 2.52808 8.78265
AYTVGGYA 6.3 3.7248 8.58755
YSAGYRWS 31.9 26.3524 8.41498
GYRACKCR 7.66 4.8087 8.32612
ASWTMCWK 16.3 12.1381 8.02599
CCTGGRHN 29.72 24.3724 7.9848
GGGGTGTG 2.52 1.05437 7.89905
CVGYAGCS 14.82 10.863 7.84251
CGGATWSG 3.78 1.90163 7.82535
GRYCGTWS 4.28 2.27926 7.39391
ACACTSTA 1.76 0.614135 7.27903
GCKCAGYS 12.62 9.03385 7.15691
WTGTAGTC 1.64 0.55086 7.10399
GCGKRGTY 9.42 6.33927 7.08629
GAKWSGMR 26.06 21.1223 6.95232
WDACAAGB 9.34 6.28542 6.94518
TCKMKCTH 12.92 9.33208 6.778
GGWRCCKG 11.02 7.71467 6.70965
CGDAASCG 3.78 1.95551 6.66792
TSAAATWH 4.22 2.2742 6.64292
RTHTCTAD 7.16 4.53818 6.59248
TMATTAGC 1.44 0.454801 6.50922
GGTGDGTR 6.04 3.66069 6.48807
WGYCRTTG 6.88 4.32716 6.4257
TCSRATMG 3.88 2.03972 6.40886
ACTSAAAA 2.14 0.86662 6.31725
TYGGTRRA 6.28 3.86223 6.28938
KDGACARG 11.84 8.45592 6.28507
AATVGGAK 6.24 3.83539 6.22352
AVGADCCA 9.84 6.77665 6.12253
AKCRCRTG 5.12 2.98396 5.97884
ATACWYAS 2.62 1.18646 5.95974
ACDMAYTY 8.9 6.01813 5.84575
GSDACGGV 9.48 6.50225 5.83325
KRYCTKWG 21.34 16.9788 5.619
GAARDGGR 18.24 14.1771 5.55074
AASGGHSG 10.48 7.38284 5.4392
AGDDCAAV 14.84 11.2023 5.10493
GRTCKMTV 9.48 6.58506 4.95831
KGARYTYG 10.16 7.16096 4.94512
TKCWARRY 15.18 11.5287 4.90153
RVGAKAKG 20.32 16.1563 4.88367
DACTCWRR 13.94 10.438 4.87008
AGVSWTGC 8.68 5.93868 4.7066
GSADSMAG 28.82 24.0716 4.69248
TGTGYHTD 10.2 7.22673 4.63207
TWGMTAGG 2.82 1.37513 4.61469
TCYRGATC 2.74 1.32048 4.60816
AWSGAWRM 13.04 9.68739 4.54926
TGAYRGAY 4.88 2.89129 4.53098
AAKTCYSA 6.2 3.93132 4.46609
TTGATYGA 1.84 0.738297 4.45009
ACTCSGYC 3.94 2.19605 4.27003
ACRTGAMA 2.66 1.28072 4.24998
TAACCCTW 1.56 0.575668 4.24278
TGGMCAGY 6.64 4.32149 4.00322
GGCGMRCG 5.02 3.03539 3.98516
VCTKGAGV 23.14 18.8899 3.96857
CAASAAMV 8.46 5.82404 3.96773
AGGSCGTG 3.28 1.7299 3.95345
ADCSAACC 5.14 3.13973 3.82662
TKBGCAAG 4.62 2.73967 3.78027
RRGKTAGR 10.76 7.79976 3.75014
GDATTCTR 3.76 2.09198 3.74167
GCTHAGRK 10.94 7.96224 3.68424
ATSGCKRS 11.02 8.04484 3.56388
AAGMAAAV 6.0 3.8412 3.5529
ATGYHGAT 2.42 1.14953 3.46641
ACGGCMRC 2.74 1.37502 3.35167
TTAADAWA 3.0 1.56145 3.29645
GTGWATTY 1.98 0.864607 3.28548
AGMGASVA 11.82 8.78943 3.1385
TCSMTCCC 6.18 4.02161 3.10735
GGACTACR 1.68 0.682275 3.04874
TDGYCCCG 7.62 5.21688 2.96816
TACRACTC 1.08 0.338683 2.85648
TTSYGTTW 4.4 2.63163 2.83556
AGCATNHG 7.12 4.82376 2.72891
CGWRMCGV 8.64 6.09735 2.72615
TWCBGHCY 20.64 16.7991 2.64045
GGCSGAAS 6.24 4.11815 2.52915
ATNARATA 2.36 1.14902 2.49363
TGCTAWKG 3.18 1.74211 2.31496
TAGTTTDA 1.56 0.636207 2.1314
MAGASKCR 14.62 11.4087 2.07435

Parameters

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parameters in ini format

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