Task #3344 - 2b6c1adf Description: Status Start End Updated Duration Sequences Logs Task Bundle finished 3 years ago 3 years ago 3 years ago an hour (4760sec) Positive, Negative Float, Integer, Tomtom Open Results Motif positions Meme Tomtom output Motif Occurrence(%) Expected(%) -log10(Binomial prob) ACKWCCYB 45.3686 16.4614 903.037 RGGWMGTN 49.5434 20.423 828.062 TGAKTCAB 21.4829 4.22549 764.837 TGAMTCAN 23.0159 5.2513 712.606 GGAMSTDR 44.0639 18.2177 698.454 AWVVGGAA 50.9024 23.5032 694.146 AVVGGWMG 46.8906 21.1019 648.402 AAWVVGGA 35.823 16.1685 445.953 GAABTVRR 43.3464 23.272 382.987 GAKTCABN 29.6477 13.4173 348.028 GGGHGGGG 13.1985 3.74397 298.178 KRRGKWMG 48.4018 29.8442 294.082 GGGGHGGG 12.2962 3.74397 250.456 GACKCABN 23.8313 11.0847 250.25 AANYGAAA 13.1768 4.25696 247.916 TKHGGTHW 28.9846 15.9489 205.934 GRGKWMGV 36.9754 22.8459 194.256 GGGGGHGG 10.785 3.61328 187.87 DACCWCAD 24.4292 13.3671 168.356 AGGWAMYG 15.362 6.95616 158.345 AWRSAGAA 21.135 11.1303 157.446 WSCKWMCB 43.5095 29.9422 156.114 RAAASRGG 20.5588 10.8683 150.549 AKTCABYN 40.5414 27.5497 148.589 TAWTYWTA 7.14286 2.17063 138.605 GGWMGTVY 20.7002 11.4604 132.052 YSRWTTCN 34.2031 22.6884 129.223 ANHGAAAS 27.4299 16.9687 128.139 GGYGGGGS 8.52359 3.08684 127.096 AGKTCMYB 28.5171 18.0555 122.918 TTRDGYAA 12.5136 5.88833 113.955 GBAMGCWV 30.6697 20.3824 109.692 KTSGHTWN 36.9537 25.927 109.455 ACCWCARN 22.918 13.9768 107.059 CGSRKBCG 5.51207 1.66665 104.986 TYTGHWTY 29.5934 19.7367 102.599 GGDHSGAR 29.9304 20.1444 99.7281 GCSGNGCG 3.89215 0.932927 97.7997 DAGGTCAN 11.5895 5.60949 97.0086 GTWCSTSY 15.5251 8.54352 94.6808 TRHSYAAY 22.3201 14.0975 89.6936 CYCKWNCK 32.0613 22.5401 87.5569 ACKMAYNN 39.0955 28.9064 87.4294 TYCVTNTC 28.7889 19.7393 85.9045 GCGDKCGV 4.03349 1.10146 85.8995 WTTYKAWW 19.6456 12.0991 84.4797 TYKAWTYD 19.613 12.0806 84.2554 TTASTCAB 8.53446 3.87985 79.5679 CGGNGCGS 3.65297 0.985243 78.215 KGCGNDCG 4.46836 1.45583 73.8142 RGGCWSGV 26.0383 17.9349 72.812 AKHCANRG 39.1063 29.7413 71.8522 AAHTMRAN 24.3314 16.537 71.1813 TGKSBKTG 28.4627 20.1708 70.3196 TGATSTMA 5.85997 2.32021 70.2043 GGAKSBGR 22.7332 15.3781 66.4879 MVGKWMGS 37.4103 28.5513 65.0544 CGDGCGNG 3.66384 1.12969 64.3698 AWAAWTAR 8.9476 4.50233 64.2463 AGNASGWA 20.7763 13.8445 63.6111 RCTCVGYN 27.1363 19.3401 63.4443 GAAKTSRY 16.3405 10.1925 63.2691 DRCCTDGV 34.5075 26.0787 61.4858 CSWGCCYB 24.8424 17.4466 61.0849 STVSGTDB 29.7347 21.8194 60.1935 AAAMAAAA 6.92542 3.2509 57.3743 RAKCSAVN 38.2257 29.7707 57.3299 GSCTGGVB 22.9072 15.9779 56.7381 TCSSTNCS 15.3838 9.67495 56.4619 CGDCGRCG 1.27202 0.158292 53.6142 ATTYWTAD 8.84975 4.73955 52.2731 CSGHCGCS 3.25071 1.05416 51.5259 TTRMRAMA 15.1663 9.72072 50.781 TTCMYCWA 13.2964 8.24254 49.8868 TCCYSTTS 17.6234 11.8132 49.4546 ATTDCVTY 14.0248 8.88161 48.5201 AGGTCHRN 12.7093 7.87155 47.2505 TAGKTCYB 8.54534 4.69621 45.8292 GTCMSYRN 35.7034 28.1617 45.675 GCKGRGCY 11.2851 6.80795 45.4531 GCASGNMG 13.2746 8.39991 45.3266 CTGKMTYN 29.8108 22.7582 45.1272 TGGAKNHR 30.5175 23.4181 44.8922 GCGKCSGS 3.08763 1.0557 44.0734 CMRGGCHS 26.6362 19.9707 43.7044 GGWGSGHG 11.1111 6.74761 43.3053 AASMDAAM 23.7334 17.4402 42.6577 AGANMGVA 26.5058 19.9255 42.5045 ANSHAASA 36.1165 28.7767 42.3317 CGCDCGCK 1.91346 0.479379 40.9161 RMAAWGRG 25.7012 19.3349 40.3181 GCGCDCGD 2.45706 0.760696 39.9049 RTGMVATM 13.329 8.68061 39.5482 RCMDAGRY 26.5819 20.1972 39.2136 GKAVGTCR 8.78452 5.08431 39.0707 WGGGYGGR 10.5458 6.46561 38.7926 CGMNCCGG 2.22875 0.654912 38.661 RVTGGASV 26.3753 20.0766 38.1676 GGGWHSGG 9.26288 5.48958 37.971 RTCRCRTG 5.43596 2.66679 37.6624 KGBWTTGH 26.4514 20.1904 37.4637 TAGHHAYB 22.2331 16.4357 37.0557 WGGGKGMG 10.8067 6.76661 36.3323 GYCSGHCS 5.00109 2.40969 35.7747 TDCRWMAY 19.6673 14.267 35.4937 KAGMWMGV 22.8528 17.1157 34.9182 AKWCRBAY 18.254 13.1174 34.0247 AMHGRAWA 23.5377 17.7992 33.7878 WGACCTWK 5.40335 2.73871 33.7353 WCCSCRCC 6.61013 3.6141 33.664 ACCYASND 24.3857 18.6181 32.9191 GNGCGDCG 2.5549 0.905221 32.5343 TYTTKKTM 18.0909 13.104 31.7344 CSCTCCCK 5.81648 3.10175 31.1995 GBAMGMSR 26.3644 20.5556 30.8315 GCYCBGRS 18.1452 13.2412 30.1765 GSTTTSRD 17.6778 12.8511 29.8639 TRVCTAAG 4.90324 2.48355 29.794 TATBYWAR 11.3612 7.49371 29.6849 GCGCRYGC 1.92433 0.594334 29.4965 MWAARCAR 20.9067 15.7545 28.9642 CDGAGMYV 30.8654 24.8518 28.8997 GCGMCGVC 2.06567 0.683304 28.406 AAMAAAAK 8.27354 5.07484 27.9619 KCSGMYCG 2.68537 1.04978 27.9317 AWTMRAYM 10.2305 6.64977 27.8236 TKCSTGCC 6.69711 3.85991 27.7847 TVGGKHGG 10.9372 7.23905 27.5872 WCCCCMAM 11.6656 7.84227 27.5718 GBSTKTSG 18.1561 13.4075 27.5463 CGRAHGTR 4.10959 1.98963 27.3111 RDGCNKAG 34.1705 28.0909 27.179 AGCMGAAS 8.18656 5.04859 26.8408 TGWAWNTR 20.5588 15.5939 26.6602 AAWTMGBW 9.12155 5.82357 26.1136 RGCHCYGD 28.5932 23.0094 25.4322 GAAVYTGR 17.2429 12.7482 25.2086 MNHTGGAS 28.8324 23.2571 25.1111 TTTKAAAN 9.94781 6.55172 24.8029 GSAKAMGY 13.4594 9.4972 24.7313 ACKWCCTA 3.13112 1.39389 24.408 AGAASTRR 14.177 10.149 24.0643 ACRSAYAC 6.621 3.93985 23.697 WDYGNATG 17.2864 12.887 23.6015 TRGGTDNY 22.4614 17.5323 23.4231 KRCMTNYG 29.5499 24.0752 23.2719 AAVDGMGA 17.83 13.4217 22.7633 DRGACAGD 20.8741 16.1464 22.7292 GWSGGMGG 9.78474 6.54209 22.0884 GACTAAKN 5.41422 3.08329 21.7654 TCCDCCCC 6.24049 3.7234 21.494 AAGTMSVW 13.8182 9.98707 21.4937 ACTMARRV 21.4612 16.7708 21.4407 RCKGRGYR 19.6782 15.1638 21.4088 WGKCCMHG 21.7439 17.0448 21.2044 MCCCAAVB 16.0905 12.0286 20.5495 ATGYAWWT 5.39248 3.11602 20.2497 RBSGWTSG 10.6762 7.38539 20.0571 GRGMAMYG 16.3731 12.3137 20.005 AGAANAGG 9.98043 6.80917 19.9229 GAMVTAVY 16.6449 12.5885 19.4937 ACDTCCGK 3.29419 1.61061 19.4277 YDAVATAV 20.7328 16.2784 19.1983 TRRGGWAC 8.87149 5.9604 18.4434 AAVHTGAA 10.5132 7.33817 18.3365 WTWGYAAY 8.30615 5.5035 18.2632 WGCAMGCH 10.5023 7.33907 18.1475 CGDCSGGR 2.65275 1.20502 18.1368 KTGGWCAK 8.34964 5.56536 17.701 AKBCATGY 9.73038 6.72284 17.5015 GGWCMGND 23.9291 19.3456 17.4401 YHATTCWD 20.4066 16.1358 17.2109 AGKNMGAA 15.8187 12.0205 17.0783 CTGGRSWK 22.3853 17.982 16.7503 ATTGWGHA 4.90324 2.87369 16.3705 GCCTVCGN 4.92498 2.89417 16.2581 TCACRTGV 6.87106 4.42672 16.2412 GAKGWAMC 8.71929 5.94204 16.2383 CGWRKSCG 2.25049 0.980998 16.1629 GRCARDGS 25.299 20.7312 16.1023 GAHTCRAB 5.3055 3.21056 15.6186 AKMCABTD 24.5053 20.0784 15.1565 TYKATWDC 9.84997 6.96559 14.8643 CKTKCTNR 22.407 18.1812 14.6485 AWWCRAAC 3.23983 1.69297 14.6053 CCGDGCGR 1.53294 0.565298 14.4901 GGBCGYSG 4.21831 2.41799 14.4443 TGAAWGVR 12.4918 9.27726 14.2979 GKGCGMGC 2.06567 0.899338 14.1848 AKSDACRR 20.3414 16.3242 14.1678 AAGVHSGA 14.9272 11.4495 13.9488 TAWAKRTA 2.83757 1.42834 13.8168 TCWCYRWR 25.9839 21.5821 13.8057 GGAGKAGG 5.3055 3.28382 13.6862 AWTMGBAW 7.7843 5.30212 13.4954 TATYTWKG 5.35986 3.33867 13.3814 TGGMYKSK 22.2875 18.1841 13.37 CARAVAGR 22.8419 18.705 13.2842 TGSTWTKG 8.53446 5.94562 13.1808 ACVGASAR 10.4153 7.5566 13.0158 GGTCWYGD 6.38182 4.1784 12.8915 GGKHGGTG 4.75103 2.88319 12.8112 GCGRKMCG 1.40248 0.5147 12.7037 CGMYKCGG 1.71776 0.706843 12.6169 KNATYGYD 24.8858 20.6955 12.3478 AGSATRYG 6.29485 4.13637 12.2594 GWCATCRN 9.2955 6.65082 12.1034 TTKBMTCW 27.9191 23.5896 11.9108 CKWMCTRR 16.5036 13.0227 11.8699 KCGMMKCG 2.06567 0.947034 11.7865 AGGGGYGG 3.25071 1.78232 11.7082 GATSBGGN 12.5679 9.53386 11.4927 ATVGMTWN 13.3725 10.2612 11.2852 CGSTKBCG 2.34834 1.15127 11.2107 WCSCRCCC 5.17504 3.28078 11.1945 GAGKCSGR 4.49011 2.74335 11.1199 GTGAAASY 5.34899 3.43137 10.9215 GGAKSGRY 8.74103 6.25727 10.7407 VTRCGGTN 4.28354 2.59841 10.6952 GGAKWSGR 10.9589 8.17809 10.6607 TGAGTTCH 5.04457 3.19965 10.6455 ACMTMAYB 11.97 9.07666 10.4979 RYATDCAM 10.2957 7.61183 10.4863 TGKAYHTY 13.2203 10.1861 10.4716 RGTGCYKR 12.1657 9.26546 10.2722 KHSTCCAR 18.0583 14.5806 10.1696 RTWKCCTR 14.5358 11.3868 10.1543 GAAWGSAG 7.75169 5.45118 10.1525 AGTDVGTD 13.2746 10.2586 10.1501 AAWCCCHA 5.99043 3.98724 10.1232 AYYCKDAC 8.12133 5.77186 10.0158 RGBCCAGG 8.29528 5.9262 9.90491 DCWGCSTG 14.9706 11.8103 9.7564 ACGMYSSG 2.42444 1.24505 9.56755 CSTCCMNG 13.579 10.5765 9.55105 GCCBWGCK 8.26267 5.92099 9.5196 RTCAKBTS 21.7004 18.0077 9.4672 CGHCSGWS 2.34834 1.19934 9.25364 HHAGAATB 16.808 13.5244 9.19729 GGCKYGGC 3.15286 1.78721 9.185 TYDGGGTW 8.43662 6.09131 9.15638 AAKTCASK 7.68645 5.45278 9.14449 TGTVBGTH 14.2096 11.1816 9.05824 GGGAKHSG 7.54512 5.34006 9.02145 GGCCGBGC 1.95695 0.938617 8.80588 CGCRCGKG 1.3155 0.522954 8.75816 AGGTCHYA 4.24005 2.64575 8.58649 CGKRCCGK 1.22853 0.481141 8.06535 GCSAMMGV 12.1874 9.45166 8.03294 AAKMCATD 7.66471 5.49908 8.03253 GAYCTDAR 5.6534 3.8117 8.0293 WAAWTMGS 6.01218 4.11248 7.94696 AAHTRYAA 8.12133 5.90243 7.82432 DGWAACAR 15.7969 12.7263 7.8042 ATSKSATH 10.274 7.78075 7.72081 GYCATKSD 16.3405 13.2735 7.24791 AABMAAGS 13.1115 10.3428 7.23893 TWAGAVAW 9.52381 7.16046 7.1867 CAGGTCCN 2.65275 1.47931 7.1284 WCSGMGCG 1.40248 0.60605 7.12339 CWYTGTVG 13.2311 10.4642 7.07405 CTAAGACD 2.12003 1.09743 6.94964 TYACCYAS 4.99022 3.32272 6.89247 VGCTCCAV 7.90389 5.77536 6.86772 WTYCGKTV 4.53359 2.95315 6.86226 GACSTYAC 1.9352 0.972679 6.73398 WGGTWCCK 6.18613 4.32856 6.61601 AATGVGWA 5.43596 3.70448 6.58624 TTARGGRA 5.80561 4.01918 6.44477 SWCGMCGS 2.51142 1.39788 6.37268 RAWTGRGG 8.91498 6.69145 6.27649 TTCKRWTC 4.67493 3.09715 6.22285 DWCGYKCG 1.63079 0.779835 6.01366 GAATYAYN 7.13199 5.1784 5.81377 RKGCWTKG 13.0137 10.3762 5.80657 TSCMMGGC 7.28419 5.31176 5.76975 TGGKBATG 6.4688 4.61857 5.7155 GGCVSGAG 5.3816 3.70658 5.6745 ACATCCTS 3.80518 2.42341 5.6081 WWRCCYTG 12.8071 10.2082 5.5922 AVSGGAAC 6.49054 4.65299 5.44627 AYCTTDRA 5.77299 4.05185 5.34519 TMRGYAKH 21.9722 18.7049 5.30432 AYCSSAGC 4.15308 2.71888 5.24195 AWTTCMCC 5.12068 3.5164 5.16451 GGGGYGYG 3.28332 2.02996 5.13936 WTHAAAAG 6.28397 4.4965 5.12445 CGCCGDCS 1.10894 0.456396 5.11566 AACTGAAS 2.89193 1.7292 5.0521 AGRGMKAG 9.41509 7.22016 5.04033 AWDCAAYK 10.3066 8.01173 5.02741 GGYCAMMG 6.90367 5.03338 5.00173 RTAGBWMG 7.01239 5.12984 4.95389 TYGAAAKR 4.43575 2.96322 4.93526 GSCSGAGG 2.84845 1.7072 4.73514 ACTAYRWW 5.55556 3.906 4.68397 CGYARCGS 1.15242 0.491639 4.6747 AGYCBGWG 10.4153 8.14442 4.58173 GAARYGYH 19.6891 16.6489 4.55703 GAGAAKTR 5.49032 3.85995 4.52681 CWVCSYCG 7.41466 5.51241 4.42009 TGCKTAKB 5.26201 3.67519 4.40219 RAMSCAAS 13.1442 10.6233 4.37343 TAWCYACB 3.83779 2.50669 4.3033 ATGWAWST 5.58817 3.95795 4.25356 AGAMAAVA 10.274 8.04642 4.23582 TYGCTVWG 10.9806 8.69012 4.10997 DAGAKWMG 12.481 10.0676 3.86457 RTGGTAWN 7.40378 5.54198 3.84985 AGAKAHSG 6.95803 5.1641 3.71458 GDDSGCAG 15.6773 13.0214 3.61689 AGGCSKGG 4.63144 3.19373 3.56879 AANCWAAG 7.17547 5.36644 3.51561 TTTRARGA 6.31659 4.62365 3.515 AVRTTRYA 11.3503 9.07554 3.51048 YACCMTRB 13.0354 10.6215 3.34767 AWAAGAAA 3.83779 2.55186 3.33128 TTGTGAAW 2.77234 1.70091 3.3252 GGKASSGY 6.2731 4.60001 3.30137 AKCCAAVY 7.82779 5.95392 3.27261 TCKCTCTC 3.23983 2.07425 3.22068 GGTWYSTK 10.8393 8.64321 3.18622 WGCGBCSG 2.38095 1.40411 3.18144 AHMAAGAA 7.84953 5.98025 3.17465 RYCGHASG 3.20722 2.05116 3.15215 WSCGHCGC 1.88084 1.0312 3.13179 TDCRAATN 7.77343 5.92124 3.06864 GYAKMCRG 8.83888 6.86375 3.05245 GBAYTYGR 8.51272 6.58349 2.938 GGSTRCBG 7.90389 6.05236 2.85011 GGSGCCSG 2.08741 1.19381 2.8298 ATAAAYMY 5.00109 3.54464 2.82577 TGARYTAH 6.01218 4.4069 2.81698 GMGMYGGG 5.88171 4.29487 2.81656 TCVCBAGC 6.70798 5.01205 2.76264 YCAMCCTB 10.8937 8.73207 2.74229 ATYCKGDK 12.5571 10.2437 2.74074 WWTCDAGW 9.34986 7.35006 2.67302 TGGAKMGR 5.02283 3.57555 2.61051 AGGCWCYG 4.67493 3.28269 2.60411 AGWNCAKA 13.6117 11.2235 2.6034 GKGGGGYG 4.28354 2.95649 2.58766 AKSAACTY 10.1761 8.1078 2.4838 TKYGYAMG 6.31659 4.69253 2.47035 ATGKVTCA 4.96847 3.5399 2.43439 ACGVYSGC 2.03305 1.1674 2.38896 ADWCGMTG 2.59839 1.6016 2.38197 AHCWCCRW 9.2955 7.33112 2.3212 CKCWCTVS 18.0691 15.401 2.24742 TCWTAWCY 4.69667 3.32208 2.23273 WGCAATNG 4.79452 3.40628 2.20444 ASGWAGCS 6.07741 4.51272 2.06781 CAGAMRTR 11.1329 9.01778 2.00091 Parameters Search parameters Complementary Statistical test type(score) Use Bonferroni correction for binomial score Skip motifs shifted by 1 symbol Motif filtering Minimum motif score Maximum number of results Positive sequences Sequences set Open Maximum motif presence by chance(%) Minimum motif presence in sequences set(%) Contrast sequences Contrast sequences set set Open Maximum motif score in the contrast set of sequences Statistic parameters Using of real frequencies Markov state length Add first run - exclude sequence if motif found Minimum percentage of remaining sequences. 0 - disable run parameters in ini format 1 Complementarity. 0 - forward strand. 1 - forward + reverse strand. 2 Minimum motif score 30 Maximum presence of motif for random reasons in the positive set of sequences [0-100] 1 Minimum presence of motif in the positive set of sequences [0-100] pos.fst File with positive set of sequences 1 0 - neutral frequencies, 1 - real nucleotide frequencies in the set of sequences [0, 1] 1 Score type: 0 - chi-squared or 1 - binomial [0, 1] 0 Maximum number of result motifs. 0 - reveal all significant motifs [0, ] 3 Markov chain order (0-Bernulli, 1-dinucleotide, 2-trinucleotide), when using real nucleotide frequencies [0-3] 0 Unsupported param 0 Minimum % of remaining sequences. First run - exclude sequences if motif found. 0 - disable. [0, 100] neg.fst File with the contrast set of sequences 0 Maximum score in the contrast set of sequences 0 Unsupported param 1 Output results with Bonferroni correction [0, 1] a.txt Results file 1 Write integer results. 0 - real values, 1 - integer [0, 1] 1 Skip motifs that coincide with the previous ones with a shift [0, 1] Delete