Motif finder

Task #3344 - 2b6c1adf

Status Start End Updated Duration Sequences Logs Task Bundle
finished 4 months ago 4 months ago 4 months ago an hour (4760sec) Positive, Negative Float, Integer, Tomtom Open

Results

Motif Occurrence(%) Expected(%) -log10(Binomial prob)
ACKWCCYB 45.3686 16.4614 903.037
RGGWMGTN 49.5434 20.423 828.062
TGAKTCAB 21.4829 4.22549 764.837
TGAMTCAN 23.0159 5.2513 712.606
GGAMSTDR 44.0639 18.2177 698.454
AWVVGGAA 50.9024 23.5032 694.146
AVVGGWMG 46.8906 21.1019 648.402
AAWVVGGA 35.823 16.1685 445.953
GAABTVRR 43.3464 23.272 382.987
GAKTCABN 29.6477 13.4173 348.028
GGGHGGGG 13.1985 3.74397 298.178
KRRGKWMG 48.4018 29.8442 294.082
GGGGHGGG 12.2962 3.74397 250.456
GACKCABN 23.8313 11.0847 250.25
AANYGAAA 13.1768 4.25696 247.916
TKHGGTHW 28.9846 15.9489 205.934
GRGKWMGV 36.9754 22.8459 194.256
GGGGGHGG 10.785 3.61328 187.87
DACCWCAD 24.4292 13.3671 168.356
AGGWAMYG 15.362 6.95616 158.345
AWRSAGAA 21.135 11.1303 157.446
WSCKWMCB 43.5095 29.9422 156.114
RAAASRGG 20.5588 10.8683 150.549
AKTCABYN 40.5414 27.5497 148.589
TAWTYWTA 7.14286 2.17063 138.605
GGWMGTVY 20.7002 11.4604 132.052
YSRWTTCN 34.2031 22.6884 129.223
ANHGAAAS 27.4299 16.9687 128.139
GGYGGGGS 8.52359 3.08684 127.096
AGKTCMYB 28.5171 18.0555 122.918
TTRDGYAA 12.5136 5.88833 113.955
GBAMGCWV 30.6697 20.3824 109.692
KTSGHTWN 36.9537 25.927 109.455
ACCWCARN 22.918 13.9768 107.059
CGSRKBCG 5.51207 1.66665 104.986
TYTGHWTY 29.5934 19.7367 102.599
GGDHSGAR 29.9304 20.1444 99.7281
GCSGNGCG 3.89215 0.932927 97.7997
DAGGTCAN 11.5895 5.60949 97.0086
GTWCSTSY 15.5251 8.54352 94.6808
TRHSYAAY 22.3201 14.0975 89.6936
CYCKWNCK 32.0613 22.5401 87.5569
ACKMAYNN 39.0955 28.9064 87.4294
TYCVTNTC 28.7889 19.7393 85.9045
GCGDKCGV 4.03349 1.10146 85.8995
WTTYKAWW 19.6456 12.0991 84.4797
TYKAWTYD 19.613 12.0806 84.2554
TTASTCAB 8.53446 3.87985 79.5679
CGGNGCGS 3.65297 0.985243 78.215
KGCGNDCG 4.46836 1.45583 73.8142
RGGCWSGV 26.0383 17.9349 72.812
AKHCANRG 39.1063 29.7413 71.8522
AAHTMRAN 24.3314 16.537 71.1813
TGKSBKTG 28.4627 20.1708 70.3196
TGATSTMA 5.85997 2.32021 70.2043
GGAKSBGR 22.7332 15.3781 66.4879
MVGKWMGS 37.4103 28.5513 65.0544
CGDGCGNG 3.66384 1.12969 64.3698
AWAAWTAR 8.9476 4.50233 64.2463
AGNASGWA 20.7763 13.8445 63.6111
RCTCVGYN 27.1363 19.3401 63.4443
GAAKTSRY 16.3405 10.1925 63.2691
DRCCTDGV 34.5075 26.0787 61.4858
CSWGCCYB 24.8424 17.4466 61.0849
STVSGTDB 29.7347 21.8194 60.1935
AAAMAAAA 6.92542 3.2509 57.3743
RAKCSAVN 38.2257 29.7707 57.3299
GSCTGGVB 22.9072 15.9779 56.7381
TCSSTNCS 15.3838 9.67495 56.4619
CGDCGRCG 1.27202 0.158292 53.6142
ATTYWTAD 8.84975 4.73955 52.2731
CSGHCGCS 3.25071 1.05416 51.5259
TTRMRAMA 15.1663 9.72072 50.781
TTCMYCWA 13.2964 8.24254 49.8868
TCCYSTTS 17.6234 11.8132 49.4546
ATTDCVTY 14.0248 8.88161 48.5201
AGGTCHRN 12.7093 7.87155 47.2505
TAGKTCYB 8.54534 4.69621 45.8292
GTCMSYRN 35.7034 28.1617 45.675
GCKGRGCY 11.2851 6.80795 45.4531
GCASGNMG 13.2746 8.39991 45.3266
CTGKMTYN 29.8108 22.7582 45.1272
TGGAKNHR 30.5175 23.4181 44.8922
GCGKCSGS 3.08763 1.0557 44.0734
CMRGGCHS 26.6362 19.9707 43.7044
GGWGSGHG 11.1111 6.74761 43.3053
AASMDAAM 23.7334 17.4402 42.6577
AGANMGVA 26.5058 19.9255 42.5045
ANSHAASA 36.1165 28.7767 42.3317
CGCDCGCK 1.91346 0.479379 40.9161
RMAAWGRG 25.7012 19.3349 40.3181
GCGCDCGD 2.45706 0.760696 39.9049
RTGMVATM 13.329 8.68061 39.5482
RCMDAGRY 26.5819 20.1972 39.2136
GKAVGTCR 8.78452 5.08431 39.0707
WGGGYGGR 10.5458 6.46561 38.7926
CGMNCCGG 2.22875 0.654912 38.661
RVTGGASV 26.3753 20.0766 38.1676
GGGWHSGG 9.26288 5.48958 37.971
RTCRCRTG 5.43596 2.66679 37.6624
KGBWTTGH 26.4514 20.1904 37.4637
TAGHHAYB 22.2331 16.4357 37.0557
WGGGKGMG 10.8067 6.76661 36.3323
GYCSGHCS 5.00109 2.40969 35.7747
TDCRWMAY 19.6673 14.267 35.4937
KAGMWMGV 22.8528 17.1157 34.9182
AKWCRBAY 18.254 13.1174 34.0247
AMHGRAWA 23.5377 17.7992 33.7878
WGACCTWK 5.40335 2.73871 33.7353
WCCSCRCC 6.61013 3.6141 33.664
ACCYASND 24.3857 18.6181 32.9191
GNGCGDCG 2.5549 0.905221 32.5343
TYTTKKTM 18.0909 13.104 31.7344
CSCTCCCK 5.81648 3.10175 31.1995
GBAMGMSR 26.3644 20.5556 30.8315
GCYCBGRS 18.1452 13.2412 30.1765
GSTTTSRD 17.6778 12.8511 29.8639
TRVCTAAG 4.90324 2.48355 29.794
TATBYWAR 11.3612 7.49371 29.6849
GCGCRYGC 1.92433 0.594334 29.4965
MWAARCAR 20.9067 15.7545 28.9642
CDGAGMYV 30.8654 24.8518 28.8997
GCGMCGVC 2.06567 0.683304 28.406
AAMAAAAK 8.27354 5.07484 27.9619
KCSGMYCG 2.68537 1.04978 27.9317
AWTMRAYM 10.2305 6.64977 27.8236
TKCSTGCC 6.69711 3.85991 27.7847
TVGGKHGG 10.9372 7.23905 27.5872
WCCCCMAM 11.6656 7.84227 27.5718
GBSTKTSG 18.1561 13.4075 27.5463
CGRAHGTR 4.10959 1.98963 27.3111
RDGCNKAG 34.1705 28.0909 27.179
AGCMGAAS 8.18656 5.04859 26.8408
TGWAWNTR 20.5588 15.5939 26.6602
AAWTMGBW 9.12155 5.82357 26.1136
RGCHCYGD 28.5932 23.0094 25.4322
GAAVYTGR 17.2429 12.7482 25.2086
MNHTGGAS 28.8324 23.2571 25.1111
TTTKAAAN 9.94781 6.55172 24.8029
GSAKAMGY 13.4594 9.4972 24.7313
ACKWCCTA 3.13112 1.39389 24.408
AGAASTRR 14.177 10.149 24.0643
ACRSAYAC 6.621 3.93985 23.697
WDYGNATG 17.2864 12.887 23.6015
TRGGTDNY 22.4614 17.5323 23.4231
KRCMTNYG 29.5499 24.0752 23.2719
AAVDGMGA 17.83 13.4217 22.7633
DRGACAGD 20.8741 16.1464 22.7292
GWSGGMGG 9.78474 6.54209 22.0884
GACTAAKN 5.41422 3.08329 21.7654
TCCDCCCC 6.24049 3.7234 21.494
AAGTMSVW 13.8182 9.98707 21.4937
ACTMARRV 21.4612 16.7708 21.4407
RCKGRGYR 19.6782 15.1638 21.4088
WGKCCMHG 21.7439 17.0448 21.2044
MCCCAAVB 16.0905 12.0286 20.5495
ATGYAWWT 5.39248 3.11602 20.2497
RBSGWTSG 10.6762 7.38539 20.0571
GRGMAMYG 16.3731 12.3137 20.005
AGAANAGG 9.98043 6.80917 19.9229
GAMVTAVY 16.6449 12.5885 19.4937
ACDTCCGK 3.29419 1.61061 19.4277
YDAVATAV 20.7328 16.2784 19.1983
TRRGGWAC 8.87149 5.9604 18.4434
AAVHTGAA 10.5132 7.33817 18.3365
WTWGYAAY 8.30615 5.5035 18.2632
WGCAMGCH 10.5023 7.33907 18.1475
CGDCSGGR 2.65275 1.20502 18.1368
KTGGWCAK 8.34964 5.56536 17.701
AKBCATGY 9.73038 6.72284 17.5015
GGWCMGND 23.9291 19.3456 17.4401
YHATTCWD 20.4066 16.1358 17.2109
AGKNMGAA 15.8187 12.0205 17.0783
CTGGRSWK 22.3853 17.982 16.7503
ATTGWGHA 4.90324 2.87369 16.3705
GCCTVCGN 4.92498 2.89417 16.2581
TCACRTGV 6.87106 4.42672 16.2412
GAKGWAMC 8.71929 5.94204 16.2383
CGWRKSCG 2.25049 0.980998 16.1629
GRCARDGS 25.299 20.7312 16.1023
GAHTCRAB 5.3055 3.21056 15.6186
AKMCABTD 24.5053 20.0784 15.1565
TYKATWDC 9.84997 6.96559 14.8643
CKTKCTNR 22.407 18.1812 14.6485
AWWCRAAC 3.23983 1.69297 14.6053
CCGDGCGR 1.53294 0.565298 14.4901
GGBCGYSG 4.21831 2.41799 14.4443
TGAAWGVR 12.4918 9.27726 14.2979
GKGCGMGC 2.06567 0.899338 14.1848
AKSDACRR 20.3414 16.3242 14.1678
AAGVHSGA 14.9272 11.4495 13.9488
TAWAKRTA 2.83757 1.42834 13.8168
TCWCYRWR 25.9839 21.5821 13.8057
GGAGKAGG 5.3055 3.28382 13.6862
AWTMGBAW 7.7843 5.30212 13.4954
TATYTWKG 5.35986 3.33867 13.3814
TGGMYKSK 22.2875 18.1841 13.37
CARAVAGR 22.8419 18.705 13.2842
TGSTWTKG 8.53446 5.94562 13.1808
ACVGASAR 10.4153 7.5566 13.0158
GGTCWYGD 6.38182 4.1784 12.8915
GGKHGGTG 4.75103 2.88319 12.8112
GCGRKMCG 1.40248 0.5147 12.7037
CGMYKCGG 1.71776 0.706843 12.6169
KNATYGYD 24.8858 20.6955 12.3478
AGSATRYG 6.29485 4.13637 12.2594
GWCATCRN 9.2955 6.65082 12.1034
TTKBMTCW 27.9191 23.5896 11.9108
CKWMCTRR 16.5036 13.0227 11.8699
KCGMMKCG 2.06567 0.947034 11.7865
AGGGGYGG 3.25071 1.78232 11.7082
GATSBGGN 12.5679 9.53386 11.4927
ATVGMTWN 13.3725 10.2612 11.2852
CGSTKBCG 2.34834 1.15127 11.2107
WCSCRCCC 5.17504 3.28078 11.1945
GAGKCSGR 4.49011 2.74335 11.1199
GTGAAASY 5.34899 3.43137 10.9215
GGAKSGRY 8.74103 6.25727 10.7407
VTRCGGTN 4.28354 2.59841 10.6952
GGAKWSGR 10.9589 8.17809 10.6607
TGAGTTCH 5.04457 3.19965 10.6455
ACMTMAYB 11.97 9.07666 10.4979
RYATDCAM 10.2957 7.61183 10.4863
TGKAYHTY 13.2203 10.1861 10.4716
RGTGCYKR 12.1657 9.26546 10.2722
KHSTCCAR 18.0583 14.5806 10.1696
RTWKCCTR 14.5358 11.3868 10.1543
GAAWGSAG 7.75169 5.45118 10.1525
AGTDVGTD 13.2746 10.2586 10.1501
AAWCCCHA 5.99043 3.98724 10.1232
AYYCKDAC 8.12133 5.77186 10.0158
RGBCCAGG 8.29528 5.9262 9.90491
DCWGCSTG 14.9706 11.8103 9.7564
ACGMYSSG 2.42444 1.24505 9.56755
CSTCCMNG 13.579 10.5765 9.55105
GCCBWGCK 8.26267 5.92099 9.5196
RTCAKBTS 21.7004 18.0077 9.4672
CGHCSGWS 2.34834 1.19934 9.25364
HHAGAATB 16.808 13.5244 9.19729
GGCKYGGC 3.15286 1.78721 9.185
TYDGGGTW 8.43662 6.09131 9.15638
AAKTCASK 7.68645 5.45278 9.14449
TGTVBGTH 14.2096 11.1816 9.05824
GGGAKHSG 7.54512 5.34006 9.02145
GGCCGBGC 1.95695 0.938617 8.80588
CGCRCGKG 1.3155 0.522954 8.75816
AGGTCHYA 4.24005 2.64575 8.58649
CGKRCCGK 1.22853 0.481141 8.06535
GCSAMMGV 12.1874 9.45166 8.03294
AAKMCATD 7.66471 5.49908 8.03253
GAYCTDAR 5.6534 3.8117 8.0293
WAAWTMGS 6.01218 4.11248 7.94696
AAHTRYAA 8.12133 5.90243 7.82432
DGWAACAR 15.7969 12.7263 7.8042
ATSKSATH 10.274 7.78075 7.72081
GYCATKSD 16.3405 13.2735 7.24791
AABMAAGS 13.1115 10.3428 7.23893
TWAGAVAW 9.52381 7.16046 7.1867
CAGGTCCN 2.65275 1.47931 7.1284
WCSGMGCG 1.40248 0.60605 7.12339
CWYTGTVG 13.2311 10.4642 7.07405
CTAAGACD 2.12003 1.09743 6.94964
TYACCYAS 4.99022 3.32272 6.89247
VGCTCCAV 7.90389 5.77536 6.86772
WTYCGKTV 4.53359 2.95315 6.86226
GACSTYAC 1.9352 0.972679 6.73398
WGGTWCCK 6.18613 4.32856 6.61601
AATGVGWA 5.43596 3.70448 6.58624
TTARGGRA 5.80561 4.01918 6.44477
SWCGMCGS 2.51142 1.39788 6.37268
RAWTGRGG 8.91498 6.69145 6.27649
TTCKRWTC 4.67493 3.09715 6.22285
DWCGYKCG 1.63079 0.779835 6.01366
GAATYAYN 7.13199 5.1784 5.81377
RKGCWTKG 13.0137 10.3762 5.80657
TSCMMGGC 7.28419 5.31176 5.76975
TGGKBATG 6.4688 4.61857 5.7155
GGCVSGAG 5.3816 3.70658 5.6745
ACATCCTS 3.80518 2.42341 5.6081
WWRCCYTG 12.8071 10.2082 5.5922
AVSGGAAC 6.49054 4.65299 5.44627
AYCTTDRA 5.77299 4.05185 5.34519
TMRGYAKH 21.9722 18.7049 5.30432
AYCSSAGC 4.15308 2.71888 5.24195
AWTTCMCC 5.12068 3.5164 5.16451
GGGGYGYG 3.28332 2.02996 5.13936
WTHAAAAG 6.28397 4.4965 5.12445
CGCCGDCS 1.10894 0.456396 5.11566
AACTGAAS 2.89193 1.7292 5.0521
AGRGMKAG 9.41509 7.22016 5.04033
AWDCAAYK 10.3066 8.01173 5.02741
GGYCAMMG 6.90367 5.03338 5.00173
RTAGBWMG 7.01239 5.12984 4.95389
TYGAAAKR 4.43575 2.96322 4.93526
GSCSGAGG 2.84845 1.7072 4.73514
ACTAYRWW 5.55556 3.906 4.68397
CGYARCGS 1.15242 0.491639 4.6747
AGYCBGWG 10.4153 8.14442 4.58173
GAARYGYH 19.6891 16.6489 4.55703
GAGAAKTR 5.49032 3.85995 4.52681
CWVCSYCG 7.41466 5.51241 4.42009
TGCKTAKB 5.26201 3.67519 4.40219
RAMSCAAS 13.1442 10.6233 4.37343
TAWCYACB 3.83779 2.50669 4.3033
ATGWAWST 5.58817 3.95795 4.25356
AGAMAAVA 10.274 8.04642 4.23582
TYGCTVWG 10.9806 8.69012 4.10997
DAGAKWMG 12.481 10.0676 3.86457
RTGGTAWN 7.40378 5.54198 3.84985
AGAKAHSG 6.95803 5.1641 3.71458
GDDSGCAG 15.6773 13.0214 3.61689
AGGCSKGG 4.63144 3.19373 3.56879
AANCWAAG 7.17547 5.36644 3.51561
TTTRARGA 6.31659 4.62365 3.515
AVRTTRYA 11.3503 9.07554 3.51048
YACCMTRB 13.0354 10.6215 3.34767
AWAAGAAA 3.83779 2.55186 3.33128
TTGTGAAW 2.77234 1.70091 3.3252
GGKASSGY 6.2731 4.60001 3.30137
AKCCAAVY 7.82779 5.95392 3.27261
TCKCTCTC 3.23983 2.07425 3.22068
GGTWYSTK 10.8393 8.64321 3.18622
WGCGBCSG 2.38095 1.40411 3.18144
AHMAAGAA 7.84953 5.98025 3.17465
RYCGHASG 3.20722 2.05116 3.15215
WSCGHCGC 1.88084 1.0312 3.13179
TDCRAATN 7.77343 5.92124 3.06864
GYAKMCRG 8.83888 6.86375 3.05245
GBAYTYGR 8.51272 6.58349 2.938
GGSTRCBG 7.90389 6.05236 2.85011
GGSGCCSG 2.08741 1.19381 2.8298
ATAAAYMY 5.00109 3.54464 2.82577
TGARYTAH 6.01218 4.4069 2.81698
GMGMYGGG 5.88171 4.29487 2.81656
TCVCBAGC 6.70798 5.01205 2.76264
YCAMCCTB 10.8937 8.73207 2.74229
ATYCKGDK 12.5571 10.2437 2.74074
WWTCDAGW 9.34986 7.35006 2.67302
TGGAKMGR 5.02283 3.57555 2.61051
AGGCWCYG 4.67493 3.28269 2.60411
AGWNCAKA 13.6117 11.2235 2.6034
GKGGGGYG 4.28354 2.95649 2.58766
AKSAACTY 10.1761 8.1078 2.4838
TKYGYAMG 6.31659 4.69253 2.47035
ATGKVTCA 4.96847 3.5399 2.43439
ACGVYSGC 2.03305 1.1674 2.38896
ADWCGMTG 2.59839 1.6016 2.38197
AHCWCCRW 9.2955 7.33112 2.3212
CKCWCTVS 18.0691 15.401 2.24742
TCWTAWCY 4.69667 3.32208 2.23273
WGCAATNG 4.79452 3.40628 2.20444
ASGWAGCS 6.07741 4.51272 2.06781
CAGAMRTR 11.1329 9.01778 2.00091

Parameters

Search parameters Motif filtering Positive sequences Open Contrast sequences Open Statistic parameters Add first run - exclude sequence if motif found
parameters in ini format

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