Motif finder

Task #3338 - 08ec98f0

Status Start End Updated Duration Sequences Logs Task Bundle
finished 4 months ago 4 months ago 4 months ago 4 hours (17547sec) Positive, Negative Float, Integer, Tomtom Open

Results

Motif Occurrence(%) Expected(%) -log10(Binomial prob)
TRTTKACH 46.6707 9.28691 2342.11
GTMAAYAN 47.4649 9.97971 2277.64
RTTKACHN 57.4919 26.3049 1075.2
TAAAYANN 50.6414 23.0933 891.565
TTKACHYW 40.9634 19.4397 608.327
ARYAAAYA 22.6634 8.57211 454.39
AAAYAARN 38.5287 20.2671 438.144
TKACYYWD 44.6898 27.8336 322.976
ATMAAYAN 21.8344 10.1626 291.675
TTTRTTTK 18.1517 7.73823 284.366
RCAAAYAN 29.2958 16.2895 263.618
GRGGHRGG 19.4083 9.21236 243.726
KACYTWGN 25.4996 13.9209 234.281
GGGHSGGG 8.45624 2.55283 221.2
RAGKYCAN 37.4029 24.3706 210.312
TCAAYANN 33.3973 21.1123 203.261
GNMCTTYG 15.8478 7.47012 197.721
TTGHTTTN 24.7229 14.8822 166.288
RGKCRDVG 34.5842 23.2856 163.859
RAKCRAWS 20.4381 11.5455 163.397
AGGTCABN 15.9176 8.13883 163.109
GGHAGNRR 40.9722 29.2959 155.884
ACTTDGNH 32.2018 21.4781 155.66
GSRGGHRG 24.6618 15.231 151.337
WTYGMTYW 23.571 14.4163 148.478
TGRMCTYN 34.6016 23.9976 142.803
KTACRYAD 16.3889 8.95614 140.469
ACRCRCAC 6.34436 2.25782 128.962
TRWTGATY 8.25552 3.51984 122.304
AAAYAYBR 25.36 16.9074 115.242
TACRYAVN 25.2727 16.8677 114.205
RSSSASGM 31.1458 21.9965 113.669
CTKGGMWN 38.0923 28.3114 112.733
AKBCCAGS 19.8883 12.5295 108.983
CGCSBSCG 2.09442 0.334075 106.091
YTKVCTTS 27.8209 19.3877 105.179
TGYGYGYG 7.69701 3.4808 100.658
AABRAARM 32.8825 24.0886 100.111
RGSAAGNR 31.2942 22.6614 100.076
CAAAYAHB 22.9252 15.3864 99.0457
GGYGGSGS 6.71961 2.91118 95.7864
CBDYCYCK 35.6314 26.8595 93.9865
RSSYTGGS 31.94 23.5321 93.1559
AAWRAKWA 20.6912 13.8064 90.0695
AMAYMGHR 33.886 25.5881 86.7415
CCAGCMYB 18.7015 12.2686 86.2603
AWKAYNAA 23.5535 16.409 85.8222
TGYGTACH 6.92905 3.24256 83.7622
SCTKGCTB 19.6701 13.2198 82.2603
TTKACHRA 15.4638 9.84129 78.8704
RGNAGSCR 25.8312 18.7 78.5182
GSADMGRB 35.7885 27.773 77.8176
DRSAAAKG 31.0062 23.4049 77.2038
TTATYTWR 9.69544 5.42266 74.5054
TCKVYYTC 19.2425 13.1924 73.1648
AGKTCRAR 7.77555 4.03856 73.0451
DGCTGGSH 28.6151 21.4488 72.7401
CGBKCGSS 2.72275 0.801729 72.4895
TAAYCCYA 4.67755 1.94579 71.8911
TRSCTYHG 22.803 16.3373 71.4406
TRTTTRTM 11.1528 6.63897 70.7244
CAGCVTSS 13.1338 8.23914 69.7612
AACWWGVM 23.9113 17.4515 68.2529
KDMCRAAG 18.5531 12.8323 67.27
GRMCTCDG 14.3468 9.30672 67.2558
DCBTCSYR 27.5679 20.7767 67.0387
HRRTGACB 18.6316 12.9563 65.8361
TYDCKRTK 29.4354 22.5653 65.1687
DWGCTRGG 14.3904 9.42854 64.7374
RTTKATTS 8.09844 4.46073 64.6698
GDCRKVGY 27.2275 20.5819 64.232
ATNAANTA 10.8823 6.63843 63.2722
ABWRAGMA 29.5488 22.7917 62.7956
TCBVTCCY 15.4115 10.348 62.7487
MAGRGMAR 28.3445 21.7275 62.1226
GWSGGHRG 15.7344 10.6813 61.08
GCGCGBSS 1.8588 0.474579 59.4466
TBMYYWTC 35.2561 28.307 58.7851
ADMRATSA 19.068 13.6507 58.2197
GSGWSGWG 8.95366 5.26689 58.1042
CGCGBCGN 1.02103 0.145248 57.1295
GNASYTRG 23.7804 17.8758 56.8118
CCYYRGCN 26.1541 20.0527 56.0792
AATVRAHT 14.4515 9.81137 55.6113
WCCCSMSC 10.1143 6.34743 52.778
TTKMTTMW 18.78 13.6757 52.0937
RABKAHMG 27.0006 21.092 51.173
TRTTTGCM 7.23449 4.15642 50.6768
GCGVCSGS 1.90243 0.563609 50.5635
CRCVCACS 6.65852 3.72486 50.2191
YRSGTCAB 12.1564 8.11647 49.7634
MRGGYAGV 22.0002 16.6478 49.6372
GTCAYYDN 27.2799 21.4055 49.6025
AAAGRAAA 7.41775 4.34399 48.8891
CACSCSCV 6.23091 3.45894 48.3667
CTKGCTVB 21.5813 16.3428 48.3012
GTTCVAGG 4.11031 1.96026 47.3647
ACCMCCAC 3.49943 1.55786 46.9673
YGMCYBGS 21.0577 15.9447 46.9647
KACYCDGB 23.6408 18.2825 46.7343
RGMSGGMG 8.36024 5.16258 46.0093
AMRTACAC 4.70373 2.40593 45.6946
WGSMAAGM 21.206 16.1555 45.5001
CWCKGTVV 26.9657 21.4532 44.4998
KGWARTCV 14.0239 9.93535 43.734
GTGYGTAY 3.75251 1.78422 43.5777
AGMCYTKG 12.3309 8.50512 43.527
TWTYWTTM 20.5864 15.7104 43.4655
TKCYAGGH 14.5737 10.4715 42.3231
RVTGACKH 15.8216 11.5598 42.2051
AGRKMGRG 13.1251 9.21342 42.2
AMCTTYGD 9.86997 6.51387 42.038
TGGSRDVG 25.7701 20.6543 39.6677
TSKRTTYG 12.1389 8.50608 39.6299
AAAHGAAA 6.57125 3.96642 39.0602
ATGSAAWB 11.0655 7.62466 39.0183
YTGGCADS 16.1358 12.0103 38.6852
GRGWBASG 16.0485 11.9429 38.5037
AKABAAAY 13.7359 9.93483 38.3079
HCGCGCSS 1.18684 0.303436 38.2518
AGGSTBAG 9.50345 6.36436 37.9488
GACYWGGM 7.62719 4.84673 37.6267
RSCTTSCB 18.3262 14.0449 37.0127
ATMDTTRA 8.06353 5.25106 36.1181
TTRKGMAA 11.5455 8.15522 36.109
AAATAAYN 8.5086 5.62285 35.885
MCWCGKGV 7.53992 4.84903 35.4869
GSVTKYGK 28.0653 23.0963 35.1228
GAMVTCAY 8.87512 5.9554 35.0684
AGHAGMKR 20.8482 16.4576 34.7355
CSWCCACS 4.51174 2.51972 34.4279
ACDAAMYA 10.603 7.4299 34.3947
TYCDTTCC 6.35308 3.94486 34.1458
TCMKCSTC 5.85566 3.55845 33.9967
AAGYMRRA 16.4936 12.5952 33.7227
GNTGGBAG 12.7149 9.28271 33.5
WTCSATTC 2.82747 1.34012 33.2481
TGASRYMG 10.4547 7.3608 33.1033
GTGYGYGS 6.15237 3.82823 32.8169
TKCCYAGB 13.7883 10.267 32.5564
AAATAKHT 7.19085 4.67478 32.3976
GGTTRGGG 2.5744 1.18505 32.3716
BTCSTSGV 17.2092 13.2824 32.3189
AYMGDRAG 16.6507 12.8418 31.8851
GSTCRGYV 13.3345 9.91018 31.7784
CTWYGTWG 5.55895 3.3939 31.765
GGGATTAM 2.11188 0.898507 31.391
AMYACVSA 18.5095 14.5467 31.3713
RSYACGTG 2.69657 1.28852 31.1703
ARATSAWS 12.8894 9.55393 31.1454
GCADGCRY 7.15595 4.68146 30.9841
CTCGGSNN 7.96754 5.36735 30.8932
AAACCAAM 4.32848 2.473 30.8649
GVMGHMGG 14.5912 11.0684 30.8306
GCTGAGGY 3.91832 2.16788 30.8107
AWTTADWA 10.5419 7.55029 30.5773
RCRCRCRK 13.0727 9.74665 29.9839
GGGGWYGG 3.08055 1.58633 29.6194
WCNTRACC 9.45981 6.67419 29.5648
TGTACTTW 2.74893 1.35727 29.4228
CCTYCCDD 17.0783 13.3767 29.4127
GGRGGGGG 3.40344 1.82804 29.1921
CWRGVACK 16.4849 12.8586 29.1493
ATTWTYWT 11.2488 8.23637 28.9928
TCATTDVC 7.49629 5.06391 28.7037
CSGRKCGN 2.51331 1.20988 28.6281
GVGATGGS 4.64264 2.78392 28.3025
TRSKVWTG 26.7214 22.3002 28.2843
AABWACDA 10.8561 7.94408 28.0432
WTCSTCCY 6.28327 4.10733 27.6952
CSGCGDCS 1.08212 0.334234 27.6324
TGAYGHMA 7.70573 5.28396 27.5708
TAHTTAAM 5.41932 3.42186 27.4163
AVAKGGMA 17.4972 13.8858 27.4044
TTAVAAAW 10.9346 8.04625 27.3749
CADKGCTR 14.3992 11.1083 27.2092
ARCCRAHS 13.0901 9.94865 27.1474
CTRCTKRS 15.0973 11.7398 27.0959
CGMRCGHS 1.71045 0.708406 26.7344
CCAGGMMN 21.4155 17.526 26.7252
ACCCTAAC 1.27411 0.44974 26.6515
GYWCYSGG 8.38642 5.89744 26.6077
ASCGMSCG 1.04721 0.326261 26.4644
GAYMGAKR 8.24679 5.78957 26.38
TKACATTB 7.28685 5.00275 25.9326
WAKGCAAR 8.60459 6.11628 25.8669
AWKRATGA 6.26582 4.16124 25.8637
AKVAATGB 15.8391 12.4957 25.7148
ACRCRWAC 4.44192 2.71394 25.4275
TKRCTRAK 14.0763 10.9374 25.2886
KAGAKMAR 16.1707 12.8287 25.2195
ASWACRAA 7.32176 5.06327 25.1913
RKGACTYD 17.3052 13.8624 25.1817
CGKCCSGS 1.14321 0.391444 25.1596
RWAATGAD 11.2052 8.40622 25.0518
GCCAAGNR 8.62204 6.1737 24.9608
MGASYAGS 10.4547 7.76046 24.8609
AYMGYARM 16.2754 12.9575 24.7208
GCMCGSCB 3.51689 2.02621 24.5844
GTGBGGTG 4.10158 2.47605 24.5283
AAAGVAAG 6.23091 4.18623 24.4785
AATRAATS 4.03177 2.42563 24.4031
DYCRAAGS 15.0275 11.8177 24.272
AACCCTAA 1.50973 0.62131 24.2075
GAAATGBM 6.84178 4.70567 24.1634
RCCSMGKG 8.81403 6.3837 24.0206
AGTYMATS 6.3269 4.28388 24.0168
AWNATMGW 10.5681 7.90706 23.9838
TGCKWTSV 11.7724 8.96717 23.9706
KMTCKYTG 13.3781 10.4083 23.7628
GGHAGVTV 19.0505 15.5667 23.7467
CAMCATSV 10.1405 7.54998 23.6804
ASYTRCYD 30.3081 26.1998 23.1418
AAACRYAS 9.00602 6.59826 23.0461
ATTKCMHA 12.6014 9.75983 23.037
AAGCAAAT 1.9548 0.932781 22.948
TTGGTTTB 5.42805 3.58945 22.8837
ACWAGYMA 7.14722 5.03219 22.5638
AAYRAMCC 6.44035 4.43881 22.5534
TTYGAGAC 2.24278 1.14868 22.1341
TATGTABH 5.4455 3.63305 22.1182
GSASGDGM 15.6733 12.6052 21.9353
CSYGGBAS 11.3884 8.71513 21.9012
TCRAACTC 1.9897 0.976396 21.8937
GAYTTCND 14.7919 11.8478 21.3122
KGTTGTTK 7.33921 5.26434 21.0874
CGCWYCSG 1.07339 0.396674 21.0551
AGHAGGDA 9.46854 7.10803 21.047
ACRNMGAY 12.4095 9.74268 20.6285
RCWCKGTR 13.989 11.1382 20.4127
GSWAGGRY 10.123 7.7359 20.1486
ACTGARCY 5.5415 3.79199 20.1415
WSCSGYCG 1.52718 0.694493 20.1413
WCCCAHCC 5.61131 3.85394 20.0495
RGRKCGCG 1.03849 0.389594 19.9165
GGCHCSGS 4.04049 2.57826 19.8374
WTTARAAW 11.6502 9.11658 19.8009
CRCCACCR 2.99328 1.76006 19.7774
CAKGCWWG 8.6395 6.47068 19.4887
MCGTGVYB 8.0199 5.90392 19.4577
KGCTDCTG 9.1282 6.90211 19.428
DACTYACK 5.8033 4.04221 19.4071
ATTAMMSR 9.28528 7.04197 19.3966
TRRAMTAK 10.1754 7.83305 19.3159
AGTCCAMR 4.89572 3.29247 19.2981
AAAAAAAA 7.23449 5.23781 19.2727
DGCATKYG 8.23807 6.13379 19.2527
ATMGATAH 1.90243 0.968166 19.2421
CGCGGDSS 1.28283 0.549745 19.2295
ACCRHMCC 6.26582 4.44273 19.1742
GCYACCRY 4.39829 2.89603 19.0269
GAAGRKMG 4.98298 3.37549 19.0236
CRCGTGWS 2.38241 1.32241 18.937
GGDSACMG 10.5245 8.17237 18.8553
CKMTGCTN 10.7601 8.38315 18.8454
AARTTAAW 5.04407 3.43767 18.7405
DGCGCGGS 1.06467 0.422837 18.5292
TGGYAGSA 5.29715 3.65823 18.5026
ATGYACAC 2.67912 1.55666 18.4866
GAKRAMGH 12.5753 9.99674 18.4535
YAGCAAMS 7.42648 5.47403 18.4295
ATKAATMA 3.15909 1.93055 18.3416
AGSCKGGW 8.61332 6.5187 18.2495
ARCMYTGM 17.1132 14.219 18.2158
KRACKATK 5.20988 3.59806 18.2096
ATVKAATA 3.2289 1.99132 18.1455
GCKGGGRC 3.63906 2.32154 17.9818
AATAYNAT 4.38084 2.92366 17.9356
TAACCTTD 3.06309 1.86944 17.8961
AAMSCCAR 10.699 8.39427 17.8489
AKCACTTG 2.53949 1.46922 17.812
AGGAYDRC 8.80531 6.71354 17.8116
CCSACSCD 4.60773 3.09685 17.7988
TYGRYTVS 18.0644 15.1393 17.7874
RCCTTGAM 4.01431 2.63085 17.7809
YGAGTTCS 2.15551 1.18547 17.6897
AVTCAGNA 12.9418 10.4501 17.4275
CAGGMCMG 5.99529 4.30277 17.2945
GBCCTTGR 6.3269 4.58899 17.2378
GTTCRAAK 2.89729 1.76484 17.0973
GTARACBD 7.793 5.88454 16.7895
AGADAVKA 15.5162 12.8659 16.7514
CTAGGMWD 8.14207 6.19517 16.719
GGGTAGRG 1.78899 0.941502 16.7075
TCCNTCTC 4.50301 3.07537 16.6762
KGGAATSG 2.94092 1.81211 16.6753
GTSGGGGR 3.25508 2.06362 16.5745
WGTARACB 7.41775 5.5717 16.5227
TCGVYSGC 1.4661 0.718748 16.4671
WCCCRRMG 8.45624 6.48765 16.4652
GRHGATGG 3.74378 2.46994 16.2169
AGGMARAY 10.4721 8.30649 16.1636
AACYYAGR 8.6395 6.66907 16.1588
DMGCSWCG 2.66166 1.61067 16.1469
GGGGTGYG 2.22533 1.27892 16.0656
AYCTWRTY 9.36382 7.32455 15.9913
KAGACSRG 3.73506 2.47224 15.9706
GKCBACMG 6.77197 5.04111 15.9556
AGACMGRR 8.51732 6.58447 15.7862
CAARYAGS 9.88742 7.80764 15.7822
GRMTGRAG 8.56968 6.63318 15.7511
TACRYATN 6.50144 4.7911 15.6881
AWNAGGAA 10.2976 8.18736 15.6286
CGCGCWKS 1.13448 0.510054 15.61
GMGCGMGS 1.501 0.76279 15.477
TGGAACTC 1.71917 0.919666 15.4384
AWATATAM 3.01946 1.91595 15.4056
DGCRCWCG 2.61803 1.5879 15.3886
KACKTTWV 10.8299 8.69157 15.3094
GRAGAAMG 3.91832 2.65128 15.2438
TTRYTTGR 8.99729 7.05666 15.1071
CGDCKBCG 1.04721 0.461556 15.0742
TSCMCGYS 4.10158 2.81159 15.0364
GCTKCYGS 7.31303 5.56902 15.0097
ACGTGRDA 1.96352 1.11089 14.9798
RGCSAKMG 7.62719 5.81171 14.9738
ATBKCDTC 8.25552 6.40468 14.9703
TTTRWTYC 9.54708 7.56167 14.9307
TAGHRAKA 6.97269 5.28271 14.8007
AGMAGCAG 4.11903 2.84181 14.6711
CTKGGKAS 7.77555 6.00316 14.5939
AARGTTAA 2.72275 1.70823 14.5813
ACACCMCC 2.97583 1.91387 14.465
TGRTTTYG 4.18885 2.91252 14.3887
TGACCTGW 3.06309 1.99213 14.2419
CTRCKRTB 12.4793 10.2928 14.101
CAWCMCCS 4.97426 3.59246 14.0566
ACCCRMAC 3.14164 2.06337 14.0345
GATGGCKC 1.501 0.796073 13.931
TGWCCCCR 3.56925 2.4179 13.9163
TTCAKTVA 6.57125 4.98402 13.9078
GGGTCASH 5.55895 4.10995 13.7723
AHAYRCAA 11.9033 9.79415 13.744
AGCABVGY 12.9418 10.7526 13.7082
YCCSASGV 11.5019 9.43339 13.6582
AAACTGAA 2.35623 1.44994 13.6497
MCGCSGGS 1.02103 0.46759 13.6489
TKGCTKGC 5.34951 3.93876 13.5929
GGMKGGAM 7.26067 5.61181 13.5858
TAGCMWGS 6.34436 4.80737 13.5361
TATYGATR 1.4661 0.781029 13.481
CMAKCGAK 1.85007 1.06606 13.4507
TKTCVTCK 7.71446 6.02494 13.4348
AYTCAYTM 5.95165 4.47675 13.3187
TAYGYGYG 2.46967 1.55022 13.3125
WATAATAK 2.35623 1.46754 13.1028
GGKTCAWG 3.3249 2.25294 13.029
CACSGCSS 1.54464 0.849808 12.9951
TTGCTTAS 1.91989 1.13254 12.9687
TKACYBAC 6.89414 5.32811 12.9524
AKGGCAAR 5.35823 3.98333 12.9183
GGGCTASR 2.85365 1.87737 12.7725
TATTTKRA 4.70373 3.43102 12.6895
ATSACBRT 4.93062 3.62766 12.662
GCWCWBGC 9.63435 7.81035 12.6615
GSAAAYGB 7.64465 6.01651 12.6488
CAAGGTHS 4.34593 3.13109 12.5701
AWTAKATA 2.18169 1.3478 12.5619
WAGTCCYR 5.41932 4.05865 12.5259
GKCRCATG 2.79256 1.83816 12.499
AAATGAKA 2.66166 1.73303 12.4761
CRCGCCTB 2.07697 1.26867 12.4739
GWASYTGM 10.3238 8.45633 12.4462
GTCSTCWK 5.30587 3.96578 12.4244
GAYCKTTM 3.64779 2.55036 12.3649
GASGDGMG 6.03019 4.60649 12.3051
GAAGGMKG 4.18012 3.00896 12.1875
AAAYMGGA 4.15394 2.99275 12.066
GMKCYTGG 7.89772 6.28847 12.0214
AAWCATBY 12.1564 10.1802 12.0149
ATGTARYY 5.14006 3.85416 11.8565
AGTTGRCA 2.77511 1.84902 11.8504
ASCTCGGS 1.37883 0.755812 11.8415
CGTGSYCD 3.04564 2.07244 11.8248
TCGAKRCM 1.48355 0.833823 11.8221
WKATTAAC 2.8362 1.90032 11.8177
TGAGCYAY 4.61646 3.40446 11.7804
AGBASKAG 7.87154 6.28305 11.7762
GCGSWDCG 1.00358 0.489413 11.7717
TCRKAGWH 11.1179 9.24716 11.7318
TCMCTKGS 9.05838 7.36123 11.7289
AGARATAA 2.90601 1.96157 11.7213
AGCSBCGS 2.42604 1.55554 11.7145
GAACRAAY 3.07182 2.09944 11.6985
GGMKSMCG 3.61288 2.55214 11.6924
CTBCSCGR 2.7053 1.79943 11.6611
GAAAYCSK 3.93577 2.83585 11.4884
TAAATKAW 3.42962 2.40985 11.4349
AACTGAAM 3.31617 2.31523 11.4214
CTRGAATN 6.99014 5.51763 11.4179
AGMAAYMS 13.7534 11.7306 11.3476
WTCACGTK 1.34392 0.74501 11.2316
ATWCSATS 2.9671 2.03496 11.175
TCVTCTGH 8.64822 7.03913 11.1
CCACCATS 2.19042 1.40676 11.0194

Parameters

Search parameters Motif filtering Positive sequences Open Contrast sequences Open Statistic parameters Add first run - exclude sequence if motif found
parameters in ini format

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