Motif finder

Task #3388 - 430aded7

Status Start End Updated Duration Sequences Logs Task Bundle
finished 14 days ago 13 days ago 13 days ago 18 minutes (1121sec) Positive, Negative Float, Integer, Tomtom Open

Results

Motif Occurrence(%) Expected(%) -log10(Binomial prob)
GGGHGGRG 15.4578 5.33185 300.55
TGCSAASN 31.3817 16.3859 297.882
STTGGCWN 47.3153 29.8771 291.599
TTSGCANN 44.0334 28.0231 252.665
GGGGHGGR 13.0207 4.47809 249.495
DCKWCCTB 42.9556 27.6602 232.004
AGKWMGHV 44.1208 28.7828 229.139
CKWMCTBS 40.5282 25.8072 222.24
ANVABGAA 43.9363 29.3361 205.767
GCCWAGDN 40.2272 26.367 194.887
CCDCCCCS 8.80668 2.75017 188.466
GGYGGGGN 9.79707 4.12512 125.254
AAWDMAAA 14.8849 7.79246 118.44
TWCNTRGA 16.5744 9.16452 113.991
GGWMGDRR 40.2563 29.4459 110.9
ADCMAMGN 35.9549 25.8332 103.613
TVGCWMNG 38.4989 28.2064 102.266
TYGRMTYN 31.9254 22.3369 101.03
RDWCAAWG 20.0893 12.3592 98.7141
TTRCDYAA 7.83571 3.38118 92.1823
WVMGKWMG 35.3529 25.8087 91.6376
WCBVTSCC 32.3818 23.2208 89.6142
CGCCSCSB 4.48587 1.42492 87.4931
GVMCTKRG 34.314 25.0614 87.3216
TTRWTYDY 24.3713 16.5185 82.001
GHSCSMSG 26.2841 18.1871 81.527
AWDNAAAY 30.3913 21.9816 77.4641
TWCYMVGA 22.4197 15.1499 74.4191
SCSTSSGS 21.2836 14.1897 74.346
ASGDMSGR 23.2353 15.9207 72.5898
CHCKGCCN 32.3138 24.0214 70.9266
GWGGGHGG 10.2049 5.49515 69.3878
CSKWCCYB 28.527 21.0029 62.8857
RCTCVGHB 28.2163 20.7518 62.334
CBSCCTCS 12.7974 7.72145 60.6791
WTTRHWTM 19.5067 13.2383 60.3907
KTWCNTDG 34.382 26.537 59.0047
TGDMYTYR 34.1975 26.4565 57.3894
RRSTCMGH 31.7895 24.2535 57.1689
WCARWGMM 34.4985 26.7653 56.8514
TGCMMGSH 35.5666 27.9074 54.2503
CKBCCCYV 33.3236 25.8698 53.4893
CGCRNBCG 3.20419 1.08741 53.2865
ADBAAAYR 27.7891 20.847 52.9408
CKRGCWCN 33.3916 26.044 51.5659
WGGGGHGG 9.84562 5.71049 51.163
GARRYGRR 23.7596 17.4151 49.683
AYRVAYRC 19.0892 13.3454 49.5613
BYATKGTN 22.342 16.2743 47.4757
GGGYGYGG 4.214 1.78254 46.8395
ANCKWMCK 20.6428 14.8314 46.534
AABNMGGA 22.1672 16.1715 46.458
VYGAMTYV 24.1771 17.9761 46.0095
GCVCVGHG 17.9726 12.565 45.6226
AAWCMRWA 10.836 6.71767 43.7615
GGWGGWGG 8.8261 5.16547 43.0478
YHCKWMCS 28.5853 22.1619 42.4207
CCTMMGGS 10.0107 6.11164 42.3191
TGAMYBAN 22.8372 17.0217 41.5372
RKWCRGWB 36.0229 29.1339 41.4555
DRYGAMTB 26.0317 19.909 41.2079
GGGNNTGG 22.3031 16.6369 39.8709
GHNCTMRG 29.8476 23.5366 38.9369
GDWMGCWR 26.5851 20.5862 38.2666
AAWNKAAA 13.7198 9.28722 38.201
WGTGKDTR 19.8272 14.5441 38.0506
GGCSSCGS 3.913 1.75497 36.9193
CACSCCCV 4.75774 2.32763 36.853
CKRCCMGS 19.9146 14.6857 36.828
AGAAHHMA 20.4389 15.2166 35.5807
CVGAGBCB 22.5653 17.1245 35.3665
GCCAACHN 21.5458 16.2175 35.2802
CCTKAGGS 8.04933 4.84866 33.8243
TGGYMGVW 26.3909 20.7269 33.1828
WCMHCCAC 10.1078 6.54337 32.3029
TSWCCMYD 33.5761 27.4852 32.0225
TWTTKWTM 10.0592 6.5619 30.7983
GCTHTGHV 26.6434 21.1329 30.5377
CCAMGDNK 35.8579 29.8296 29.563
AMYYACWN 31.2069 25.4502 29.4103
GCGRCSGM 1.69919 0.526984 28.8085
CSYSGADB 28.5853 23.0526 28.7424
TRCDYAAY 8.56394 5.43241 28.666
WCKWMCSY 18.1571 13.5961 28.4581
RTCRCRTG 3.77707 1.84277 27.5824
RKGGWBMG 23.2935 18.2643 27.5784
GWSCMMGM 27.624 22.3017 26.7732
KACRRABR 20.3612 15.6937 26.2842
RTGACSTM 4.29168 2.23465 26.2347
DAWKCAAS 13.5547 9.71641 25.8926
TCKSYCTC 10.0398 6.75445 25.6824
AWKCAABH 17.6425 13.3028 25.6637
GGADAYRR 20.4874 15.8604 25.4505
GYGGGGHG 4.79658 2.62174 25.4119
GCSGMGCG 1.19429 0.304276 25.3205
ACAAWRGV 13.7392 9.94725 24.5039
CYCCRCCK 5.89378 3.48664 24.0732
GKWMGWYR 17.3512 13.1653 23.6402
TTWGGCWH 15.419 11.4632 23.5521
CCKGHCYS 23.8567 19.0672 23.3903
DGMCCTGR 22.7012 18.0218 23.1991
TWGYTTTR 6.91329 4.3212 22.9479
AASWNAAA 16.4676 12.427 22.8834
RSCAWKCR 20.2641 15.8297 22.8358
GKWMGHRY 27.9153 22.8731 22.7684
TSGYAHSH 35.1296 29.7005 22.6022
TGCSAAWN 17.2541 13.1511 22.462
CSRSGCYK 19.798 15.4339 22.4532
KGCGMNCG 2.54394 1.12424 21.8232
ATYGWWYK 7.02981 4.45957 21.6877
GCADAGVB 28.4494 23.4646 21.6013
ABAKSDAA 25.9443 21.1748 20.9975
TTCTGRGA 6.23361 3.88323 20.1057
TGACGWMA 1.76716 0.66837 19.8928
AVRKACAW 16.1181 12.322 19.5417
GGCVGWSG 9.88445 6.90819 19.4022
STCCMTDB 29.3815 24.5383 19.1983
ATCKGATN 2.85465 1.38413 19.0847
GKCHCCAB 21.5458 17.276 18.8743
KCKRCCMG 16.5453 12.7719 18.4772
GGSYGGGH 14.1567 10.6593 18.329
GSGHTGSG 7.9231 5.33063 18.0636
ASGTCAYB 6.95213 4.53637 18.0462
GCAHDCRC 9.66113 6.80815 17.5755
TCMSTNTS 26.187 21.7018 17.2763
TGGRYSGD 10.0592 7.17085 17.0941
GGCMGSWD 31.4594 26.6928 17.0632
CKTGGMCB 10.6709 7.70256 16.9402
GAWGBWGR 27.925 23.3842 16.6749
AAWYSAGW 10.535 7.6269 16.1693
TKATBTHA 8.20468 5.6561 16.0221
TTAGHAWH 6.93271 4.61706 15.6903
ADCSCMGM 15.1762 11.7396 15.5736
GCGMGCGH 1.17487 0.384349 15.3608
AWVRAAAG 14.5742 11.2564 14.7574
AMWTARYW 12.0109 8.98946 14.7459
RAKCSSAG 11.9817 8.96845 14.6709
TADRTANS 9.75823 7.05357 14.4176
WCSRSGYC 11.7681 8.81448 14.1197
DGARYTGR 28.9446 24.615 13.7373
TGKAKVYR 26.488 22.3044 13.6286
AWCCRRWY 11.506 8.63944 13.2174
CGCRVCGR 1.51471 0.610539 13.1683
HVRTGACS 12.6517 9.66523 12.962
TGGMYKCY 26.7113 22.5783 12.9442
KTYGWWTG 5.90349 3.89437 12.8525
WSSCTKAG 18.9824 15.3917 12.8274
WCSYSGWS 20.8564 17.1287 12.704
TCKWWCTY 8.04933 5.69337 12.5507
AAWKMGAA 5.20439 3.35084 12.3
GCSSCGGG 2.12642 1.02671 12.2121
AKTWSMTV 25.8763 21.8662 12.1482
ACYAYGTR 3.02942 1.68075 11.8099
GCCWMGCY 10.9234 8.21553 11.8008
TAGAAWYN 7.80658 5.53079 11.701
GMSCKRRC 19.3902 15.867 11.607
AKCSARCN 25.8472 21.9086 11.4144
TGYADHTC 11.6905 8.91829 11.3665
RRCTMNGG 24.8859 21.0208 11.232
GGTGGWKH 8.09787 5.80493 11.1894
TCAWTYDH 13.914 10.9125 11.1817
TGAKHDAY 13.6906 10.7295 10.9379
RAGKYCAR 21.2059 17.6195 10.7879
TWWCBWTM 16.3997 13.2025 10.6533
GGKMGGYG 4.15574 2.581 10.5647
TTCARTTY 3.74794 2.26564 10.4718
AWWMGYAW 7.65123 5.47353 10.2564
TRTKCWTW 10.001 7.50989 10.1426
WSCKGMCY 28.7601 24.8108 10.0083
ATMDAHTM 6.96184 4.90439 9.9603
GMAKVCRG 27.7114 23.8185 9.9571
GGAKSGRH 14.8364 11.8501 9.77097
RDWCAASG 12.7974 10.0144 9.73825
RBSCTTTG 13.8946 11.0051 9.68083
CARGGCYK 15.885 12.8196 9.57254
GSTGDGYG 11.8555 9.18847 9.51944
CRTGGTNB 8.79697 6.50693 9.38122
GHCGBYCG 1.89339 0.93385 8.99239
GWKCTGRG 13.3411 10.5648 8.89674
TCCTSTTB 15.4287 12.4659 8.79925
GSTRTGGK 7.23371 5.20364 8.6397
GTCRCYKS 9.55433 7.2127 8.63692
KTGGHYGS 19.565 16.3221 8.28468
AVBACWSA 28.4105 24.6755 8.15981
RCRCAMWG 14.7878 11.9387 8.09872
TTTMRHAA 7.05894 5.09353 7.91631
CGDRAKCG 1.48558 0.682954 7.70337
GAGKAGGR 7.46674 5.45521 7.69831
ACATKGTN 5.12671 3.48314 7.61684
GGHTGGRG 9.87475 7.56977 7.48416
KAMKAAAN 16.1957 13.2977 7.27188
TGGVTCNC 12.7197 10.1358 7.1752
AACRAAMC 2.78668 1.63677 7.03502
ATTWMRAA 3.97126 2.56666 7.01274
WTDCTADG 8.30178 6.22303 6.94912
CTRGGYMB 23.0799 19.7485 6.93412
RGCSGCCG 1.08748 0.441888 6.81465
AGGCBGSC 10.5447 8.22224 6.65229
GCSTKGAG 5.55394 3.88862 6.56768
RGAWMGVR 29.2067 25.6277 6.48395
CSTRGGCB 10.5738 8.26224 6.45778
CKRGCAWS 15.3704 12.6134 6.42797
RTRGTWWH 12.9236 10.38 6.42231
TTRMAAWA 4.83542 3.30002 6.3498
TWCMWCCC 7.26284 5.37039 6.12644
CCDCCSTD 12.6129 10.1303 6.02635
DYGAWTVG 6.88416 5.05357 5.95411
GRGWDAKG 21.0894 17.9875 5.85417
RGMCTMAG 9.76794 7.59703 5.71976
TAAMTSWA 3.20419 2.00619 5.67864
CGMVCGDG 2.39829 1.38736 5.5485
CARCTCHG 10.2437 8.04328 5.41976
AKSHACWG 26.8376 23.5071 5.23738
ARGGGRMG 9.7291 7.6082 5.08562
ATKGWSTY 8.5251 6.54053 5.07462
ACTVARHA 11.5934 9.28612 5.04685
AVAATKMG 5.40829 3.84527 5.00594
TYMRAGTC 5.24323 3.70752 4.97388
AWSSAAAA 7.64152 5.77445 4.91728
CCGVCCGV 1.72832 0.910423 4.91675
ACGHARBC 3.92271 2.61504 4.87782
WBTAGGTC 2.57307 1.54349 4.81778
CGMTRCSR 3.09739 1.95802 4.68935
TGCVWSSG 13.914 11.4315 4.68507
TCCMTHCK 9.21449 7.18155 4.64649
TWCSTTVA 7.17545 5.38806 4.59294
GCTSNMTG 24.2548 21.1277 4.5343
RGNACTYG 11.7196 9.44395 4.51377
GCACKGHY 8.9232 6.93759 4.43646
TWGRCTAN 7.525 5.71137 4.31619
RRYGACGV 3.71881 2.47455 4.27445
GTAKSTRV 8.97174 6.99356 4.25874
ATCCMYWY 7.43762 5.64912 4.09675
CGGWKCGB 1.25255 0.59689 4.06597
AHHCGGAA 3.4081 2.23348 4.00665
ATDMKAAA 4.98107 3.53848 3.96257
AMDAWYCA 11.2924 9.10627 3.91388
TRCSCMGB 14.2829 11.8512 3.81308
TTGCDTCW 4.85484 3.44119 3.78366
ACSBAGHR 13.545 11.1865 3.65619
AGYGAKTB 5.87436 4.31792 3.65021
TVTRATTR 4.42761 3.09463 3.53528
AGKWMAAV 21.2642 18.4134 3.48299
AWACYACA 2.86436 1.82137 3.39836
GGYGGKAS 4.84513 3.45779 3.30966
WCGCCSCS 1.505 0.789994 3.29002
GVTCTTDG 9.16594 7.24195 3.2528
GCTYWGGS 14.5936 12.1934 3.23938
AGAGDCVG 9.92329 7.9313 3.14358
GAAMKNAC 9.71939 7.75104 3.10019
TYASTYAC 4.1169 2.85846 3.0564
WSRSATGG 13.4285 11.1358 3.05365
TGGMCCHG 10.535 8.4989 2.96621
TTCAAASD 4.80629 3.44514 2.92973
AAWYGHAC 3.612 2.44794 2.8879
AGSSTGGG 8.30178 6.50126 2.83564
RCTTMCGG 2.07787 1.2272 2.83336
ATHKMTAG 3.41781 2.29348 2.77691
TRGKTYRR 13.477 11.208 2.76571
TCACTSAD 5.43742 3.99596 2.72578
ATRTKYRT 5.80639 4.31726 2.678
WTWGGYMG 9.69997 7.77668 2.56674
GCMMGCWR 21.8371 19.0677 2.54827
RWGCADAG 12.7197 10.5327 2.53434
TGHCKGCC 8.76784 6.94478 2.48171
TCAGAWYN 11.1661 9.11679 2.45629
TGSGBATR 5.35974 3.94746 2.41344
AYMWAMCC 6.7191 5.13111 2.40268
AAMGKKAA 5.70929 4.25311 2.35209
CAWSWATV 9.89416 7.97117 2.33793
TGCDWTYR 8.91349 7.08964 2.30191
ACACTGTA 1.11661 0.540196 2.29849
GGGCSYCG 1.39819 0.740765 2.16885
ACYGTRKK 8.40858 6.65092 2.12063

Parameters

Search parameters Motif filtering Positive sequences Open Contrast sequences Open Statistic parameters Add first run - exclude sequence if motif found
parameters in ini format

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