Task #3629 - afbd44d4 Description: Status Start End Updated Duration Sequences Logs Task Bundle finished 2 years ago 2 years ago 2 years ago 8 minutes (494sec) Positive, Negative Float, Integer, Tomtom Open Results Motif positions Meme Tomtom output Motif Occurrence(%) Expected(%) -log10(Binomial prob) NWVCMMHN 61.5031 27.9269 61.0983 WVMHNCMN 58.2822 27.9269 48.7786 WVMMVDBM 63.8037 33.7939 44.8637 HHNVCAVN 59.3558 32.515 34.7148 CDACCTSN 7.05521 0.702445 20.4521 CMHHRHND 55.5215 33.85 19.6714 ACWWCCTH 5.06135 0.329567 17.7859 ACHDTRCW 8.28221 1.20126 17.7425 AANSWRCT 7.51534 1.13118 14.5726 CADHCTAS 5.3681 0.540559 13.2709 GSAVCHYN 14.5706 4.92258 10.6794 AHCMNTVB 17.4847 6.71871 10.4986 WVCWVCTR 9.66258 2.44009 9.73514 MHACTRCS 5.21472 0.684364 9.1445 CMSWCYSR 8.12883 1.83447 8.76076 AWCMTDSA 5.3681 0.779147 8.33716 MMNTCANB 15.184 5.77867 8.05415 CASWWSWB 10.8896 3.35751 7.55594 BTMAACMN 6.74847 1.37156 7.35295 KBWRAACH 9.04908 2.54109 6.47219 GNACTKWG 5.06135 0.824721 5.93474 TGCMCWHK 5.21472 0.895169 5.73088 ACYSASVB 8.12883 2.19573 5.55914 KCCCYRRS 5.3681 1.00363 5.07577 GCHYAYMV 7.97546 2.20379 4.89953 RDTCHMCN 12.1166 4.55103 4.77786 CYCMWRGN 7.66871 2.07282 4.72372 AYARNSTA 5.52147 1.17196 3.85456 AWNMCWTG 5.52147 1.21021 3.45244 TTSYAYRK 6.28834 1.57713 3.28087 MCCHTBYR 7.51534 2.20575 3.1509 GMNCCTSR 5.21472 1.14124 2.78892 Parameters Search parameters Complementary Statistical test type(score) Use Bonferroni correction for binomial score Skip motifs shifted by 1 symbol Motif filtering Minimum motif score Maximum number of results Positive sequences Sequences set Open Maximum motif presence by chance(%) Minimum motif presence in sequences set(%) Contrast sequences Contrast sequences set set Open Maximum motif score in the contrast set of sequences Statistic parameters Using of real frequencies Markov state length Add first run - exclude sequence if motif found Minimum percentage of remaining sequences. 0 - disable run parameters in ini format 1 Complementarity. 0 - forward strand. 1 - forward + reverse strand. 2 Minimum motif score 35 Maximum presence of motif for random reasons in the positive set of sequences [0-100] 5 Minimum presence of motif in the positive set of sequences [0-100] pos.fst File with positive set of sequences 1 0 - neutral frequencies, 1 - real nucleotide frequencies in the set of sequences [0, 1] 1 Score type: 0 - chi-squared or 1 - binomial [0, 1] 0 Maximum number of result motifs. 0 - reveal all significant motifs [0, ] 0 Markov chain order (0-Bernulli, 1-dinucleotide, 2-trinucleotide), when using real nucleotide frequencies [0-3] 0 Unsupported param 0 Minimum % of remaining sequences. First run - exclude sequences if motif found. 0 - disable. [0, 100] neg.fst File with the contrast set of sequences 10 Maximum score in the contrast set of sequences 0 Unsupported param 1 Output results with Bonferroni correction [0, 1] a.txt Results file 1 Write integer results. 0 - real values, 1 - integer [0, 1] 1 Skip motifs that coincide with the previous ones with a shift [0, 1] Delete