Motif finder

Task #3642 - 855f79b7

Status Start End Updated Duration Sequences Logs Task Bundle
finished 5 months ago 5 months ago 5 months ago 10 minutes (631sec) Positive, Negative Float, Integer, Tomtom Open

Results

Motif Occurrence(%) Expected(%) -log10(Binomial prob)
TAWAAWTA 22.06 2.024 749.467
AWAAWTAR 24.76 5.21992 452.182
ATTNWTAG 18.98 3.43706 387.863
WAAATMGH 23.08 5.78901 346.806
AAWTMGHH 30.48 10.8625 300.009
TGARTCAB 16.14 4.34103 212.813
ARCARSTG 29.24 12.7624 197.035
AATMGMHH 27.54 12.0865 180.62
WTTDTAGN 25.22 11.7922 140.411
TATYTTDG 12.84 3.90081 139.612
GGGHGGGG 11.34 3.23604 132.606
ACARYTGM 19.1 8.27488 118.537
GRCAGSTG 21.68 10.2018 114.519
GGGGHGSG 11.76 4.16785 98.9167
WAMATAHM 19.82 9.74144 91.744
CKATTTTR 7.9 2.34112 83.5626
RACCWCAD 19.1 9.65078 81.2409
GGSGGHGG 12.32 4.99196 81.0096
CGGSGDCG 4.58 0.845679 80.5407
TGHGGTYD 21.7 11.7742 77.3399
ATTKWTAH 10.32 3.98188 72.5584
GAKTCABN 24.18 13.9819 72.0014
TTDTAGNH 26.9 16.5736 65.3058
CGCNTVCG 5.44 1.44858 63.4818
GAMTCABN 23.08 13.8485 58.8133
WWRSAAWS 35.22 24.2164 57.9268
CGVGGCSG 5.9 1.84128 54.9636
GCGDCSGS 7.92 3.00015 54.9486
GCGRNGCG 5.28 1.54351 53.4785
KCGWKCGB 5.22 1.54716 51.6372
AGYYGYTN 35.38 24.8844 51.2857
GGYRGGGN 22.74 14.1147 50.0425
RWARCVAM 27.94 18.6147 48.0712
TATTMWTA 5.28 1.65985 47.5658
CGRHGCGV 6.22 2.18941 47.3777
AAWYWTAG 8.92 3.88447 46.6561
CGDKMGCG 4.56 1.31118 46.0625
RCARHTGG 22.48 14.2124 45.3286
ACCWCARN 22.64 14.3938 44.6086
WRSAATGN 25.22 16.6146 43.7827
TGCASCTG 9.44 4.39059 42.2721
DKBSWTTG 39.6 29.6681 40.7174
KGCGHDCG 5.24 1.83083 38.933
DGGSGGCG 7.1 3.06088 35.8856
ASBSAMMG 32.74 23.9175 35.2741
WWRTAWCY 16.32 9.96637 33.8382
ADAMMTAC 7.5 3.39772 33.8065
ATTYYKGG 13.56 7.83289 33.214
CGDDCGRS 7.1 3.19166 32.145
TGASTAAB 6.38 2.72013 32.1449
GKARGBRR 36.24 27.4258 32.079
TTAGTMAY 4.34 1.50674 31.0429
WWDCBAAR 32.46 24.086 30.9385
CGYYVCGG 5.82 2.41342 30.5689
RSAAWSSR 33.76 25.3149 30.4853
ATHGCWYH 17.88 11.4774 30.2719
ATAYDTAG 4.28 1.49189 30.2396
TAHTTDRA 12.52 7.22405 29.8706
GCARSYGC 14.72 9.02404 28.6942
RGKMVGWG 37.98 29.4249 28.4897
GSCSGHCG 6.24 2.77986 27.7613
GGKWHGGR 16.58 10.6604 26.839
GRMCTNGR 23.9 16.8688 26.8073
GAGVSMGR 26.14 18.8419 26.7247
TAKKTMKG 10.26 5.72897 25.8334
DSGSWMGG 23.6 16.7213 25.5683
RGRCAGSK 29.02 21.5335 25.4874
GGSGGCGH 5.4 2.31129 25.4703
DACRVWTG 18.28 12.1786 25.442
HVGTKACN 32.24 24.4801 25.2471
WDCVAAGN 37.02 28.9389 24.8861
RAHYGVAD 37.46 29.6452 22.419
GTYACBDN 32.0 24.5929 22.2718
GGGHGHGG 13.38 8.3901 22.2348
AGAMMTAG 5.0 2.20081 21.1298
GAAATMGM 4.82 2.09132 20.9091
TRSVWACN 35.58 28.1221 20.4893
RKSWTTGN 36.78 29.258 20.3937
DCGCKRCG 4.2 1.71492 20.3405
ACDCAHWC 14.5 9.46962 19.9827
KCGNCCCG 4.12 1.69088 19.5055
ARGDCARR 28.3 21.5633 19.2335
CGWBKGCG 3.82 1.52287 18.9009
TTTDTAWC 5.18 2.41657 18.5394
GTSSGTRN 14.06 9.26489 17.9806
DGKGSGTG 14.38 9.53815 17.8786
GRWGMVMG 32.86 25.9375 17.7046
AADKAHMA 24.08 17.9463 17.6104
CGVRHCGG 4.82 2.21141 17.5831
CATTSYWS 15.34 10.3662 17.5553
GCSRRGSC 18.94 13.4943 16.9346
ASSGWGVG 14.56 9.77174 16.8673
CGRYCCGV 3.86 1.64655 15.786
AWKCMASR 24.84 18.8367 15.7591
CGKWKCCS 5.92 3.06494 15.4643
WGVMCTKG 29.32 22.9507 15.4608
AMTKGADH 19.62 14.2967 14.8669
AAKATRGM 7.42 4.20098 14.862
CGRCSGRG 3.78 1.62775 14.8211
CGCHCGRV 5.76 2.98654 14.7035
ANDAWCAA 12.72 8.42981 14.6229
GSYTHCGG 6.26 3.35777 14.5169
TGAWSTMA 7.22 4.08548 14.2444
GCTCSGBS 8.84 5.37976 13.5006
AMYYACTK 12.36 8.25786 13.1076
WSAKACMD 30.48 24.3412 13.0434
GRARCRGV 26.12 20.3551 12.8298
GGSGWSGM 12.34 8.29767 12.4449
GWSGTHRG 12.92 8.78404 12.42
RWNCCYAG 27.56 21.7622 12.1605
TGBAATYN 12.32 8.31816 12.0152
ARWSMGAH 24.22 18.7483 11.8747
WKAATWGM 10.32 6.68523 11.832
TSGCWYBY 31.3 25.287 11.7432
TBCBTRGM 29.08 23.2378 11.6308
WGCGDCSG 4.12 1.97369 11.6162
CARYTGWG 16.94 12.3088 11.5272
TWGAAHTV 10.04 6.49213 11.3904
RGRTSGHD 33.78 27.7117 11.0835
CWSAKACV 20.3 15.3215 11.0732
GCMTGCGY 3.52 1.59185 11.0551
GGAWTGWD 9.04 5.72566 10.8525
GRDCGHCG 4.26 2.1058 10.7792
ACAGGTGB 5.92 3.31368 10.6445
CYWCARAS 19.8 14.9437 10.5059
ACTBAVMA 16.46 12.0133 10.3833
ATNGAAHT 6.02 3.41234 10.2285
GGCSGGCG 2.34 0.8791 10.0799
GKMYCKGR 23.22 18.1048 9.83529
ATTKWAAG 3.62 1.70705 9.80308
GRCARWGV 27.46 22.0155 9.66965
KCWYTGNG 32.68 26.938 9.36372
WAHKTAGY 10.72 7.2289 9.23829
WWCSHAAV 23.74 18.6617 9.21244
RTGACVWM 16.4 12.1021 9.10609
GMGCGWSC 4.34 2.24967 8.86924
AATMGAHG 3.44 1.62938 8.70022
YRSGGTGR 13.26 9.43044 8.63587
AABAATMG 3.88 1.94061 8.51666
ATKARTWA 4.7 2.53334 8.39819
RGACARWG 10.78 7.35516 8.38218
RSCAYCTG 13.62 9.77838 8.25992
GDASGARG 10.32 6.98493 8.23384
CGHDCGTB 3.88 1.95519 8.19326
GCMYGGVD 30.76 25.3614 7.90179
GCGKCGWV 3.6 1.7818 7.69149
CGRCGAGS 1.9 0.700808 7.05007
WAADTAVG 8.94 5.94769 7.03337
YCGGKCGN 4.34 2.34855 6.89768
GWDCVAAS 15.98 11.997 6.83825
TAWRSMWA 14.32 10.5499 6.75101
DCGHMRCG 6.46 3.97324 6.72602
WTKGYAWK 16.16 12.1808 6.63414
AANWAAAC 7.2 4.56935 6.60354
WAGYCAYY 14.3 10.5562 6.54286
GCGBGCGG 2.58 1.14132 6.47733
GCTDCGRB 7.96 5.19387 6.4588
CACTTCCG 1.48 0.479808 6.34905
ASKAMGVA 10.64 7.44448 6.18473
TAGCHYHK 24.62 19.916 6.12974
RAMBTGAR 15.08 11.3115 5.94119
CTTCCGGB 3.24 1.61389 5.81637
AGCCWKGR 15.64 11.8226 5.80657
RASARACM 16.48 12.5886 5.64661
KVGWAMGR 15.74 11.9441 5.54354
CGWDMCCG 2.48 1.11223 5.47266
GWATGTDV 9.94 6.9293 5.40502
TKGYTTSR 12.9 9.46678 5.39963
ADVGAYKA 13.2 9.73475 5.33964
WTTRAAAM 6.02 3.72721 5.30143
GGCGWCSG 1.5 0.516895 5.20789
WCGGHGBC 7.04 4.55337 5.14738
ANCCYAGV 24.64 20.109 5.02151
ACTTCCGK 1.68 0.626649 4.97823
ATRCRYAC 3.52 1.85957 4.8187
ATATBTWT 4.14 2.31491 4.801
ASNAACAG 11.22 8.08438 4.76995
CGRYWCGS 3.1 1.56544 4.71669
TCCGNHCG 2.52 1.17419 4.53857
RCYYAGDG 24.72 20.2654 4.51716
TCSGCCSC 3.14 1.60427 4.48646
GGGVCMGG 9.04 6.26148 4.47778
AKCTGYMA 15.26 11.6719 4.33996
RCCARYTG 13.8 10.3811 4.32785
AYAKABAC 8.74 6.02739 4.29482
GGCANGMR 17.28 13.505 4.15923
TACVCACW 5.1 3.08841 4.12145
CWRCGRCG 2.94 1.48157 4.09255
TATMWWTG 4.16 2.37315 4.04979
ASGCYYCG 4.2 2.40765 3.97608
TSGHTMWG 15.16 11.6387 3.91573
GWNCTAMR 13.86 10.4989 3.80969
ARKMATYC 11.64 8.55402 3.80885
TGSGYATG 3.5 1.89803 3.78734
TKCYAGGD 14.44 11.019 3.75889
GCGKTGSC 3.08 1.59819 3.71712
DCAGWGMR 26.42 21.9976 3.66239
ADGKCTAW 9.12 6.41161 3.63525
RYGATGWM 7.46 5.0241 3.62841
KWACTYAR 8.2 5.63918 3.62367
GGGHGVGH 22.54 18.3938 3.6087
GAGGNGSG 8.74 6.10015 3.5414
AATWACYY 4.96 3.02595 3.43737
CGGTGGCS 1.8 0.755523 3.10794
GTAAYYND 14.74 11.3796 3.05544
CWDGGHMG 29.74 25.2395 3.05275
AGGDGMRG 16.74 13.1842 2.99614
ATWWAGHA 7.9 5.45709 2.89978
TGWTACTR 2.84 1.46791 2.87099
GRWACTDR 12.22 9.17572 2.84268
MTSCSTGS 18.84 15.1678 2.50852
GDGCCKGG 9.64 6.97797 2.46746
GDTSGYAK 11.78 8.84753 2.37619
AYCTGTTS 4.24 2.55138 2.17956
AGGBWSGA 10.0 7.32391 2.15028
ACCCMCAM 5.98 3.94006 2.12794
KCGDTMCG 1.42 0.550652 2.12389
ACGWDCGB 2.0 0.923177 2.04703
RAYTCMAG 7.7 5.37689 2.00008

Parameters

Search parameters Motif filtering Positive sequences Open Contrast sequences Open Statistic parameters Add first run - exclude sequence if motif found
parameters in ini format

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