Motif finder

Task #3342 - 977dfaff

Status Start End Updated Duration Sequences Logs Task Bundle
finished 4 months ago 4 months ago 4 months ago 28 minutes (1718sec) Positive, Negative Float, Integer, Tomtom Open

Results

Motif Occurrence(%) Expected(%) -log10(Binomial prob)
TRTTKACW 39.0697 9.80875 1490.59
GTAAAYAN 32.6206 8.38251 1168.08
GTTKACHY 27.5853 9.79918 621.861
GTCRAYAN 18.5095 6.03039 447.657
TTKAYTTW 23.475 9.95013 375.433
TMAAYAHG 19.8185 8.35903 310.806
TTTGYTTW 17.9073 7.30681 295.101
AAYMAAYA 21.0228 9.65303 278.087
TGAMCTYD 18.492 8.4679 240.678
AARCAARC 14.3555 5.79616 234.299
TRTYKAYC 16.066 7.11585 220.262
GGGHGGGG 7.60974 2.06962 217.655
RAGKTCAV 18.5793 9.00309 211.664
KNACTTWG 19.5654 9.74003 210.198
GGGGHGGG 7.4352 2.06962 205.939
ATTKAYHT 17.6892 8.61865 197.1
GRGGSHGG 18.3524 9.73508 163.699
TAMWTADY 18.4135 9.84288 160.696
ATMRAYAW 15.5249 7.79829 156.346
AAAVAAAA 15.6645 7.93258 154.581
GACHTTGN 15.106 7.71564 144.715
WTGTWTGY 14.1897 7.26901 133.405
TRWTTGCW 14.085 7.49521 118.481
TRKGTAHA 15.394 8.50192 117.352
AGKTCADR 16.7903 9.5745 117.24
GGDCRDAG 15.3853 8.56437 114.328
TTRCDTAD 12.104 6.33659 104.093
GGYGGSGS 6.71961 2.70626 100.787
AAAMAAAK 14.7919 8.52251 97.0587
TTGYTTTK 13.3258 7.40326 96.9243
GTYKACAR 10.5594 5.42738 93.6279
AAWTMAAM 14.4341 8.38403 91.5475
ACYTTGDM 15.2195 9.148 85.9481
TCRAYADY 14.8093 8.89611 83.3066
GRMCTCNG 15.2631 9.31403 81.2497
TTYGTTYG 6.10001 2.5964 80.285
GTHCAMRG 13.2472 7.77248 79.5152
AGKTCABY 13.6487 8.10026 78.9783
AAGRHAAA 13.7097 8.18873 77.4835
GGNRGGMG 15.0188 9.28342 75.555
GGSWDAGG 15.3678 9.58509 74.854
GCGBKCGS 2.26896 0.506859 74.4191
CGCSBSCG 2.09442 0.442022 72.6777
TTKYTTTC 11.5193 6.66857 70.5229
ASGSWKAG 14.2421 8.81022 70.4941
RAGGVCAG 12.8196 7.68687 70.286
GCCYBVGC 14.1025 8.71544 69.9187
GSKCASKG 14.7744 9.274 69.3199
TGSMCTTK 13.5178 8.28725 68.6011
TAAWCADY 15.3766 9.79691 68.2245
TCTGYCYY 14.9315 9.46415 67.2941
GSASGMRG 14.757 9.32472 67.2236
TAAYCCYA 4.67755 1.88359 66.8221
ACTYRGNA 14.0501 8.80566 65.5302
TAVAYAKA 12.7847 7.81751 64.7127
TNRCTMAG 14.914 9.58633 63.032
GYVCTBGG 14.3643 9.16281 62.2581
TCSVTBCS 12.2786 7.54308 60.3528
TTAWYTTD 15.1322 9.87417 59.7635
ASGBASGR 12.8109 7.99273 59.5378
ARAYAAGR 13.1949 8.3196 58.9601
RTACRYAH 11.4321 6.94487 57.876
AKSCCAGS 15.106 9.98265 55.9945
GMCCTTTG 4.32848 1.82311 55.2821
AWTCVATB 10.4023 6.22094 54.9005
ASYGAGYB 14.5737 9.61478 53.9098
AACAAARM 11.4931 7.16408 52.1485
AAAMWGAA 10.9695 6.7514 52.0021
ACYCYRYC 12.8545 8.2955 51.1697
MTSGRATB 14.3381 9.52236 51.009
CACSSMCV 11.7899 7.44397 50.8123
GCAHDCRC 11.1528 6.93492 50.7579
AAHHGAAA 13.6138 8.96228 49.8962
GGGWHGGG 5.98656 3.0468 49.269
ACRCRCAC 6.34436 3.31229 48.8023
CTTRGCWB 14.2421 9.52615 48.7006
CGCNCSGS 2.40859 0.764844 48.4235
TTGACATW 3.61288 1.48083 47.4852
WGMGRCVG 13.9628 9.38228 46.2904
TRCTWTGB 12.3746 8.09278 45.5957
CCDCCCCD 9.05838 5.44342 45.2702
TTDAYTSA 13.5788 9.10948 45.0164
AGKGMWSG 13.6836 9.20348 44.8365
ACCMCCAC 3.49943 1.45597 44.1443
GRSGWHSG 12.8633 8.55767 43.8556
CRGCSTSS 11.3186 7.31744 43.0395
GAAYKSAH 13.0989 8.80582 42.4364
AARTMCAH 13.893 9.47659 42.2718
DGCGYKCG 1.68427 0.458461 40.4347
TCCBVMCC 12.872 8.69485 40.3636
TRYGTAYB 10.6641 6.88265 40.1646
CRBGCWSG 13.1949 8.97741 40.0386
KYACTVTG 13.605 9.33569 39.6909
DGCCAANG 14.3381 9.95704 39.6499
GCCMGSCB 11.3273 7.45852 39.1914
GAGHYVGG 13.3869 9.17789 39.0383
ATKAMCTH 8.87512 5.52009 37.8461
RAWKAAMG 13.1512 9.03208 37.7177
ATYGATYS 3.37726 1.47546 37.4896
RGCCBKGG 12.872 8.85523 36.2624
GSCKGGCY 10.3063 6.75686 35.3825
GAASSNAG 12.7149 8.75907 35.3655
AMTCRYTV 11.6415 7.86147 35.3253
TTARAAAW 8.10716 4.99413 35.1782
CWMKGTHG 13.8406 9.72589 35.061
AKARTHAA 13.0901 9.10209 34.7302
CKCACTVN 13.6487 9.57847 34.682
AGACRGRR 8.81403 5.58273 34.3501
TWACCTWD 8.99729 5.73452 34.2108
AWGMAAAK 12.1477 8.33855 33.9569
GKASSKGG 10.9346 7.3393 33.615
TGGMYTCD 13.3694 9.39485 33.4125
DACTYAGR 10.6292 7.11402 32.8807
AMCKTTGN 12.3484 8.56209 32.6209
AKCWAWGY 12.8196 8.96574 32.5112
ADGAAMGR 11.3012 7.69483 32.3084
GGTTRGGG 2.5744 1.04608 31.9097
TAYSTARB 8.69186 5.58556 31.3117
ATTKACWM 9.45981 6.21277 31.2257
GYCTHTGY 13.8581 9.93762 30.6024
CGVMGCGS 1.597 0.496047 30.3989
TRCCTYDG 13.0901 9.29413 30.2558
AACAAGVH 13.797 9.92443 29.7433
WATGMAAW 8.38642 5.39939 29.5346
ATMRAYAS 11.8509 8.29733 28.9076
GRCRGWGM 12.872 9.17181 28.8139
CRGGNCMG 12.4182 8.79439 28.5755
TAARYACH 13.6487 9.86639 28.2408
AGACYWKG 9.25037 6.16076 27.9542
CCWCCACS 4.17139 2.203 27.5737
GSRTGGWG 7.64465 4.87059 27.5072
GTSGGNGG 6.0651 3.62879 27.3587
YGARTTCB 5.79457 3.42432 27.2086
TSSAWYTC 11.4582 8.03807 27.1918
ATSRMTBA 13.6225 9.9032 26.9884
GCGRCSGN 1.78026 0.631123 26.9754
GAAADGWM 13.3694 9.69871 26.6842
TTHGTTSW 11.755 8.32019 26.5107
TAARAAWA 7.44393 4.75256 26.2209
CDGGGCTV 12.0866 8.62715 25.9851
TDTAATYM 9.19801 6.20074 25.7694
RCARACRG 10.9695 7.68672 25.7362
TGCNYGCY 11.2837 7.96922 25.3748
GATTDCRD 8.63077 5.75114 25.281
TYKGTADA 11.3797 8.0797 24.7312
ACCCTAAC 1.27411 0.37723 24.6642
KCCSAGCH 12.7062 9.2322 24.4514
AAWTVGAW 8.36897 5.56743 24.4418
WCGHDCGC 1.43119 0.462503 24.4126
TTSGYWTY 11.3186 8.05696 24.08
CGKKMGSS 4.79972 2.75326 23.9825
CWTGTTYG 5.5764 3.3509 23.872
GYKYGCAY 7.56611 4.93269 23.8651
AARRATBA 13.4741 9.93702 23.6818
AWSRTKAA 11.3622 8.11411 23.6449
GAKCRADS 12.6189 9.2054 23.4478
ACCRYVCC 6.23091 3.87828 23.3855
AKAYRRAC 9.85252 6.8648 22.8961
TGYRTGYG 8.7704 5.96246 22.8061
GGGATTAM 2.11188 0.887947 22.4749
ACRGWGCH 12.0691 8.78264 22.3624
GAAYNAAC 6.25709 3.93213 22.3528
AGRAMGVA 12.0517 8.77348 22.2408
TACNCARY 11.5717 8.36505 22.1233
TGAMCTYC 4.96553 2.93781 21.8327
CTTTGDAD 12.3746 9.07972 21.7046
GGGGGGGG 1.80644 0.710732 21.5653
GRSCGDCG 1.29156 0.418665 21.066
TVGWATKK 13.16 9.80277 20.9604
ARGAMARC 11.9644 8.76612 20.8584
RCMBAGTG 13.2734 9.90893 20.8323
TASATAMR 4.67755 2.74749 20.7435
TRKCTTWG 8.31661 5.67202 20.6407
TCVGCCTC 3.28999 1.72968 20.1965
GCYAAGHB 13.3083 9.98096 20.0577
CGSKDCGS 1.91116 0.795975 20.0505
HMTTAACB 8.00244 5.45036 19.6609
TBAMTGAR 12.2262 9.06378 19.4856
TTGDGYAA 8.56096 5.92505 19.4553
GGMWVSGG 12.5665 9.36631 19.3874
WWSGMAMG 13.0552 9.80568 19.1866
GCTYRGYM 10.8299 7.8689 19.1645
AACCCTAA 1.50973 0.566538 18.8324
RGGCBKGG 12.1564 9.03803 18.8129
RKTCCARG 9.86997 7.08786 18.2582
CSTDGCKK 13.0203 9.84291 17.9512
CRCCACCR 2.99328 1.56791 17.8438
GGWSAWSG 9.39 6.70087 17.7669
WTMTTTGY 11.5804 8.59054 17.7628
KRWCTAYR 11.9382 8.92157 17.415
TCVBTWTC 10.6903 7.85416 17.0398
TGYCCTSK 11.8073 8.83293 16.9328
ATCBDYCT 10.3849 7.59632 16.9112
GASARAKG 12.1477 9.1504 16.5875
TKACWTTY 11.3448 8.45038 16.5247
RGCACTBR 10.795 7.97331 16.4893
AAAYATKR 12.7934 9.73081 16.3887
GRSSTKAG 11.5717 8.6618 16.2826
GGAHVGAM 10.699 7.90971 16.1077
AARGTACR 3.07182 1.66744 15.9404
DAGWCCAG 7.70573 5.36464 15.7749
AAWGASAA 7.33048 5.06029 15.5407
MYTAACCD 6.196 4.12283 15.5093
AASAWCAA 6.59743 4.45301 15.503
GGWGMSMG 11.9731 9.05856 15.4819
TGASATHR 9.50345 6.90962 15.4363
ACRCATAC 1.66681 0.708825 15.3759
AACSAAHC 3.85723 2.28195 14.9318
ASGYABGY 9.64308 7.05645 14.9068
TTYGAGAC 2.24278 1.09956 14.9013
CWVGRACK 12.2087 9.30944 14.7305
AGTAGCTG 1.80644 0.811952 14.539
ACTTWGKK 8.5435 6.13041 14.5352
AMSGWMGV 10.4634 7.79385 14.4181
TRAGCWAB 8.80531 6.36134 14.3896
TGAMCYRK 12.8807 9.93034 14.31
AAACCAAM 4.32848 2.6718 14.1139
GCWCSGBG 3.07182 1.71811 13.8351
TACRGWGN 10.507 7.86603 13.7889
TTTMRAAA 8.07226 5.76521 13.762
CGDCDBCG 1.77153 0.802105 13.7333
TBGCWMTG 11.2052 8.48229 13.719
TKCWTAKY 10.3063 7.70734 13.4824
ACSCMCCC 2.88856 1.59264 13.4248
GAGGNGSG 5.96911 4.01823 13.399
AGMGWWVG 12.296 9.47255 13.2829
KCBTCCKG 10.0009 7.45539 13.2131
AYRTACAC 3.2289 1.85233 13.1798
AAGDGMAA 9.89615 7.3703 13.0984
GTWKACYR 9.01475 6.60811 13.0525
GDTSKTTG 10.5419 7.94403 12.9321
TAGCTGGG 1.87625 0.88579 12.9198
AGRATBGM 7.81918 5.59507 12.8
CGRCCSGS 1.09085 0.392056 12.7462
CHGCWCBG 12.1738 9.40305 12.6399
GGBCRCMG 7.38284 5.23338 12.6088
ASCYASGR 11.3535 8.67816 12.5955
WCCYBAGC 10.8212 8.22285 12.3467
RACTMYGH 12.2 9.45389 12.1933
ATTDMRAA 11.6939 9.00792 12.1245
ACTMAGNY 11.3797 8.73408 12.045
TCSASSYC 9.59944 7.17061 12.01
WKCSTMSC 12.4444 9.68716 11.949
AGDGCRAR 10.4285 7.90662 11.8355
RGRWMGAG 11.9295 9.24461 11.6827
CTTWGTTS 4.83463 3.16191 11.5526
GCCSTNCS 5.96911 4.09342 11.5427
CSCMCCCR 4.5641 2.94643 11.477
CACWCACS 5.21861 3.48174 11.358
AYARTGAH 9.71289 7.30664 11.3426
TTCYAKGW 9.19801 6.86157 11.2597
TGKCTKYC 11.9295 9.27229 11.2405
AMMTAASC 5.82075 3.99381 10.975
WAGMWATS 10.2016 7.76529 10.828
ARYGAWTK 8.16825 5.99793 10.7054
GTGBGGTG 4.10158 2.60388 10.6823
TTCRAGGC 1.99843 1.01604 10.4951
DCSTTYCS 10.5419 8.08685 10.473
AKAMGRWA 8.84894 6.60413 10.405
GCMCBGAS 6.16982 4.32072 10.159
TWTMCATK 8.26425 6.11266 10.0996
TGNGCAYG 5.11388 3.44562 10.0843
AATWMAAT 4.18012 2.68864 10.0401
CSTCSGSS 2.97583 1.74556 10.0388
ATRHAATW 8.45624 6.28326 10.0239
TRATTYYA 7.23449 5.2345 9.93098
ACWGADAA 10.5507 8.12942 9.89955
AARTTAAA 3.44707 2.11603 9.80517
TCRKTVRC 9.69544 7.38173 9.7662
CTTAWCTB 4.53792 3.002 9.36966
DGCTCAGV 12.5316 9.93795 9.3268
AGCCAAGH 4.85208 3.26563 9.19601
TTKAWTTG 5.49786 3.80264 9.14027
RTTCAKTD 9.5209 7.2683 9.08395
TGAMCCYD 10.7252 8.33703 9.05864
SCKTTSGN 12.4444 9.88533 8.94864
RRCTACAK 6.6847 4.82487 8.70527
KGGGGWTG 4.38956 2.90697 8.68861
AGCWAWGR 8.09844 6.05862 8.43964
TSRCTCAY 6.75452 4.90302 8.33305
GGYABGTG 5.00044 3.42472 8.29452
GCCACCRY 3.13291 1.91816 8.2751
AACABTGM 8.58714 6.50828 8.04455
KAACTWGR 5.35823 3.7337 8.04125
TSGGAVGV 11.3535 8.9676 8.01542
CTGAGCHB 11.9469 9.50406 7.98083
TGTCCHYA 7.2694 5.3658 7.94926
RGGGDCAG 8.48242 6.42242 7.94154
KGWTGTTK 11.9557 9.51682 7.91101
AMRKGCAY 11.9295 9.4953 7.88108
ATWCKAWT 2.86238 1.72106 7.85278
KTAWYTAR 9.1282 6.99872 7.80471
TAYMAAYA 7.75809 5.79943 7.76917
MWAGCAMK 11.6066 9.21339 7.75053
AKMSGDMG 11.0394 8.7125 7.61858
GCGGNGCY 2.56567 1.50437 7.47904
TACRSACR 4.80845 3.30232 7.41438
CTGSGHAS 10.0358 7.82846 7.41369
CTYRGKAS 10.2365 8.0089 7.39252
AAKGTCYW 7.26067 5.39347 7.29216
GSMCKTGM 8.45624 6.44518 7.16236
AATDAMGA 4.17139 2.78841 7.13944
GCCSMSGR 6.07383 4.38577 7.03116
TTHHCTTC 10.7165 8.46712 6.96652
CCYCASCK 7.42648 5.56453 6.80293
CVCKTSCK 9.07584 7.02544 6.62502
TCKTTSYM 11.275 8.99983 6.53714
AGCKACKY 2.75766 1.68405 6.38339
GACMYAGR 8.02862 6.12007 6.30858
TCSSMTCC 3.62161 2.37459 6.25814
AAYMTTTG 6.52762 4.81615 6.23313
AATTMKTW 4.86081 3.39712 6.2327
AGGVGGCG 1.44864 0.7171 6.23069
TYGGGAGG 2.51331 1.50103 6.18519
GGGWGYGG 3.98813 2.67852 6.11554
TGRKYTYG 12.0604 9.74741 6.04284
GGACMKTG 3.53434 2.31209 6.03957
TTGACASW 6.95523 5.19948 5.99657
ATTAMAGG 2.82747 1.75278 5.92851
GMWGGGCR 6.49271 4.80234 5.92703
AGKTSRCA 8.24679 6.33605 5.91639
RTSGTATG 1.38756 0.683603 5.77712
TTGCRWCA 3.07182 1.95324 5.70146
GGGCTABR 3.82232 2.56154 5.63755
ATRAMGAW 4.80845 3.38594 5.50512
GGKTCAKD 9.75652 7.70727 5.49054
TCTMHCTC 7.13849 5.39389 5.38704
ARVCACYG 11.7026 9.47595 5.33449
YCACCATS 3.72633 2.49548 5.31935
CATVCVTK 10.2016 8.12211 5.276
AWMTATAM 4.49428 3.13374 5.25399
GGWAGWGR 8.16825 6.31146 5.19703
TAAMGHWA 6.97269 5.26295 5.14569
TGMAATSY 7.4003 5.63839 5.13068
TAACYAHY 5.76839 4.22539 5.03224
ACTGWAKV 9.31146 7.34647 4.9381
GHTCTKRG 11.4321 9.26284 4.90552
TACMMADG 11.4844 9.31315 4.87043
TVTCACTR 5.85566 4.30899 4.86941
TRRGTYAS 11.4321 9.26697 4.8517
WTTGGMTY 8.4126 6.55155 4.83274
TTGYCYTV 12.2175 9.98924 4.77105
GHKCRKAG 10.9172 8.80814 4.73757
TGTCSTWS 4.58155 3.23081 4.72412
GGHAGHMG 11.1703 9.04326 4.6661
ARGACADG 7.3043 5.5829 4.65132
AGGCWARS 9.18056 7.25893 4.50715
TCWCCWSC 10.4547 8.40722 4.49679
GMTSRCTY 11.8422 9.67024 4.47366
TMRACAGG 5.21861 3.78376 4.45757
GMAGNTSG 10.219 8.1981 4.44376
AAMGGAMR 7.31303 5.60668 4.38745
TVYGTTYG 8.49987 6.6589 4.38321
AWARTMKA 8.55223 6.70732 4.35736
AATYCTAR 2.79256 1.78022 4.26006
GTASVTAG 2.11188 1.25064 4.19085
RTCGHTGB 2.75766 1.75597 4.15697
GGAGGAKC 2.51331 1.5657 4.06792
MGTCYATS 3.31617 2.20988 4.05138
TTACMSAG 6.08256 4.55239 4.00484
ATTGCRWC 1.64936 0.908534 4.00393
GCCHSGTS 7.69701 5.97154 3.98099
RTSCSTGS 10.0271 8.06704 3.8712
TCRCTBGV 8.17698 6.40594 3.86236
CGBATGCB 1.35265 0.699432 3.77303
AGAAAAVA 8.14207 6.38463 3.71632
CCKCCCKK 5.48041 4.04994 3.66033
WCSGRNCG 1.81517 1.04445 3.50488
CTCNGTGK 10.219 8.27009 3.48769
AGSAMGSY 11.72 9.63896 3.48238
GDYGGYMG 7.58356 5.90341 3.47998
ARTRMGAY 6.30072 4.77453 3.44955
TGATTAAY 1.60572 0.890821 3.41104
GTCCWYTG 4.73863 3.42847 3.37417
TTGATYBC 4.67755 3.37995 3.30307
TTRRGAMA 9.99215 8.0802 3.28055
GKYCAYGY 7.95881 6.25406 3.23001
GAMHGAAK 8.04608 6.33302 3.21444
RAGTBCTR 11.5281 9.48627 3.20343
TCSSTCTC 2.69657 1.74205 3.15502
ATYYGWAY 6.35308 4.84236 3.08098
RGGCATGG 2.42604 1.53007 3.05476
CKYGGCCB 4.91317 3.59939 2.95111
GGTTMRAG 3.00201 1.99883 2.887
RVAATKAG 9.73034 7.87452 2.86835
KTGGTTNG 6.24836 4.76355 2.86466
GGRMRATG 6.84178 5.28688 2.85167
RCKGCCCK 4.49428 3.25427 2.69221
GCGYSGGG 1.0123 0.485653 2.60776
ATCBTAWC 2.02461 1.23058 2.5839
GAMAADCR 9.91361 8.06383 2.5754
TSCVTKGC 8.88385 7.1329 2.54888
TCRATACH 2.55694 1.65172 2.54728
TYKAACCY 5.53277 4.1584 2.52277
GGWCRGCS 3.7176 2.60654 2.50354
ADTKAYAG 10.0358 8.18234 2.48303
ATKMGNAA 8.0199 6.3614 2.47077
AACYCMAR 9.85252 8.01965 2.43201
YCCRAGTN 8.83149 7.09525 2.4204
AGCMTRGW 8.12462 6.46019 2.40261
TTGGMTMN 11.6328 9.65652 2.33174
WCGCVBCG 1.06467 0.528829 2.22337
AGAAATSV 7.19958 5.65027 2.15351
CGADCSVG 1.78899 1.06408 2.07378

Parameters

Search parameters Motif filtering Positive sequences Open Contrast sequences Open Statistic parameters Add first run - exclude sequence if motif found
parameters in ini format

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