Motif finder

Task #3345 - 6b8bed39

Status Start End Updated Duration Sequences Logs Task Bundle
finished 4 months ago 4 months ago 4 months ago 48 minutes (2884sec) Positive, Negative Float, Integer, Tomtom Open

Results

Motif Occurrence(%) Expected(%) -log10(Binomial prob)
GGGHGGGG 12.4725 4.41797 198.833
AAANYRAA 20.119 9.71307 184.238
GGGGHGGG 11.4147 4.41797 153.924
AAWYRAAW 14.8854 6.82824 146.094
GGRSKYGG 19.7334 10.9906 120.401
TYVSTWHC 37.2411 26.6854 96.9259
GGYGGSGS 12.3733 6.23876 92.4629
AANVAAAS 29.1097 20.0603 83.7319
AAHRAHAA 19.0392 11.7051 80.553
GAGKHVGR 33.4949 24.2322 77.7704
AGGHMGDR 35.357 26.1067 74.1234
AASHGRAA 17.4967 10.8189 70.6084
RVASGHAG 37.7589 28.7295 66.5914
AGHAMKVA 27.7545 19.9153 61.9213
GGWHVGDG 38.1005 29.6036 57.2659
AAYRAAYR 10.1036 5.54162 55.9151
TTKDTTTV 20.0639 13.6034 54.5873
RGBGAHVG 34.4645 26.4971 52.9048
ACRSWCAC 9.96033 5.56993 51.3396
GGGHHGGR 24.2948 17.4353 51.0204
GDBSGASG 22.1133 15.6097 49.5009
ARSHAAGV 35.39 27.6052 48.9487
GAABBVAM 33.2856 25.7598 47.3358
CRDRGCYR 34.8281 27.2472 46.4382
GCGGSGCB 6.19216 2.99732 45.337
AAANNCAA 16.2957 10.8593 45.2034
TATBTWWR 11.4037 6.92496 44.0895
WTRVATAN 15.877 10.583 43.5821
GVCTYRGN 37.208 29.8294 41.2895
TGTRYGTG 6.80917 3.55269 40.5076
GGSHGGAG 14.2353 9.37902 40.0176
GCGHGCGB 4.42926 1.94114 39.2501
GHVCKGRG 33.4398 26.4778 38.7954
RGMHMYGG 37.0648 29.9293 38.0685
ADWMGDAA 20.9013 15.256 36.5286
DRVCTMAG 31.8973 25.2307 36.1739
DGCSTBSG 23.3032 17.4183 35.9454
AMWNAGWA 25.5729 19.4748 35.6466
CGDSSGCG 4.63861 2.19071 33.919
AWTDCDWA 12.4614 8.19094 33.8179
CCRCCCCD 9.29925 5.66153 33.3602
GRCADRGV 36.0291 29.4554 31.5058
ARRDYMGA 29.5284 23.3858 31.3712
GGAGGGRV 15.0397 10.4689 31.3353
CNTVCSTD 36.1503 29.6006 31.1253
GWVSBTGG 30.9608 24.7831 30.447
GNGAYWGR 24.5372 18.9155 30.0007
ABNWACNA 31.5998 25.4822 29.107
TGRRKWYR 34.3103 28.079 28.4463
RCTWCSTN 21.0886 15.9788 27.5278
AAGNMAAW 17.056 12.4509 26.9544
TNACYKWR 29.5064 23.7449 26.4028
RGBGCWSG 23.0167 17.8494 25.5662
AYMAAWYA 9.58572 6.2121 25.3553
ATTKTWWW 10.4672 6.93615 25.2859
GCTNCGGN 10.346 6.86751 24.6125
CGSMKCGS 6.53372 3.84852 23.957
TAMMTANH 14.6871 10.5996 23.4536
RCTCRGHB 25.4517 20.2394 23.3236
WGGGHGGG 12.8471 9.05764 22.7833
DRGGKGCG 8.83649 5.72669 22.5414
AWVYAAYH 26.0577 20.8766 22.3245
AYHGAAWB 17.8603 13.4613 22.1606
CGGNNGCG 6.22521 3.67402 22.1603
GCGRCSGS 3.96651 2.0113 21.8456
RGGMWHYG 32.6796 27.1039 21.8381
ATVWATGH 7.23887 4.48895 21.5128
RGTGMGKK 12.2411 8.62517 21.2582
GARBCVAG 19.3477 14.871 20.9613
TCRRRKYC 18.9952 14.5915 20.4479
GBCWYYGY 32.944 27.5228 19.985
RAYYMCAR 25.5619 20.6101 19.9847
HRAGYDAS 34.6518 29.1487 19.9482
CGCGNGCG 1.99427 0.752302 19.9023
AYAAYNAA 7.7457 4.96476 19.7741
HAGYGABN 32.1067 26.8078 19.1472
GMGYMSCG 8.03217 5.23946 18.7935
GRWAGHDG 32.3711 27.0955 18.7491
DGCGMGCG 2.97488 1.40792 18.3798
ACSNACSS 9.43147 6.42277 18.1349
GTNSGTRH 15.4584 11.6565 17.3926
GGGMSBCG 8.70428 5.85869 17.3389
CCGMABCS 5.92772 3.6228 17.2421
AGKYKGRG 19.7554 15.5416 16.9089
AGWYMGDR 26.6307 21.8736 16.8588
RYCMCCAH 19.8325 15.7099 15.6739
DTTBRTTR 14.1582 10.6277 15.6565
WTKCTWWR 18.9841 14.9456 15.6005
GGHSGBCG 8.3517 5.65607 15.528
WGYGWHTG 15.9652 12.2633 15.1726
TTTTYAAW 5.47598 3.36251 14.8068
GGHARSCR 20.9343 16.7887 14.7924
TSCNTDGY 30.3548 25.5786 14.7096
AAMTVAAS 9.68488 6.82779 14.5168
TCRWYTYC 10.1366 7.24172 14.0009
KRGMAMGR 25.2755 20.8742 13.9949
TCSCWCCB 13.1335 9.84873 13.8587
WCSCCRCC 7.84487 5.32606 13.7266
GCVTGGNB 28.2063 23.6543 13.6619
AAMGGRAA 6.17012 3.96318 13.6026
GVMCYGGM 21.1988 17.1468 13.4571
GACWKRMR 23.3032 19.0925 13.4317
HGGTGRCN 18.4442 14.6337 13.3988
CRGCCHGG 10.0595 7.21118 13.3983
RCSGWGSG 7.96606 5.44452 13.3774
GDKSGHAG 26.4323 22.0995 12.5257
KGGNSGTG 15.26 11.8333 12.497
TDCRRAKY 22.2014 18.1603 12.4756
TBCATWTC 5.11238 3.17546 12.2935
DKRCMAAG 19.8435 16.0238 12.0798
GRAKYRGR 25.6501 21.427 11.912
TAMAATNA 4.42926 2.66405 11.7121
WMGAAWYR 11.9105 8.94059 11.4413
AGSYCAGS 14.9405 11.635 11.36
TGAAHGNA 8.56104 6.05876 11.2684
AKWCRVAY 18.323 14.7531 10.7055
GYGGGCSG 3.58087 2.05162 10.6921
GCCSCDCG 3.86734 2.26986 10.6607
AKGWAGCH 12.814 9.80563 10.4849
TAMVVACA 11.7012 8.83042 10.3834
ATSAAAVY 8.05421 5.68346 10.3211
CGVRCSGG 4.58352 2.83846 10.3007
ATYTRDAA 8.71529 6.26551 9.98252
RGAGAHRG 18.885 15.3572 9.72095
GHTBGGGD 21.8709 18.1217 9.67733
GGCYGKGS 11.7453 8.93983 9.39793
AGTKCHWD 24.1186 20.2642 9.25019
GDGCGMGC 4.14279 2.53525 9.22539
GHVCYMGG 25.8264 21.9593 8.43497
GGSGYGGM 7.97708 5.74101 8.22355
ACRWWHRC 15.4584 12.3639 8.19968
GCWCCGYS 5.17849 3.40797 8.12677
ACVSACAD 15.1609 12.1023 8.10428
GTWVWTAN 13.5192 10.621 8.09539
TAHKTACW 4.21992 2.64595 7.96733
GCAWSCRH 10.9189 8.31725 7.93934
TTTCTTHC 5.7955 3.93048 7.78089
RKCCSYAG 14.2023 11.2644 7.76026
ACCBTGNM 16.9127 13.7416 7.63778
CGWCYHCG 2.80961 1.57902 7.45532
GRASGAGG 7.36007 5.26878 7.32834
GCTNWGGK 18.279 15.0564 7.0356
TGCMTNTR 13.8167 10.9893 6.90749
GCDGSGAY 9.50859 7.15828 6.82321
GCMMMGRG 17.9044 14.7382 6.75809
TRAKTCAN 8.56104 6.3417 6.68898
AGAVKYSR 29.859 26.0021 6.66506
GSAGCGMG 3.64698 2.25132 6.56595
GGGCWGHG 11.1393 8.63205 6.36782
TTGAWMDH 14.7312 11.8708 6.32502
KAMGAMAR 11.3706 8.84848 6.23786
WAKRTRAY 11.1283 8.64871 6.03379
CRRGHTSG 14.61 11.7958 5.94054
GTGSGGYG 3.88938 2.46895 5.92665
GRCAKYGR 10.6545 8.23757 5.90287
WGGBTHGG 13.8497 11.1088 5.89474
AGGBWSGC 11.7893 9.2545 5.84837
AKDGASRA 21.4852 18.1903 5.62374
AABCYAKR 15.5906 12.727 5.57042
TTGWTTRV 6.73204 4.85506 5.3243
ATGBHAAY 7.59145 5.60304 5.17651
AWGYYAYY 16.7034 13.8108 4.96923
AACYMWAA 5.90569 4.17755 4.92036
TWAVWATG 5.68532 3.99847 4.80424
GGTHYCYR 18.2569 15.273 4.7512
AATGKHWA 6.19216 4.43547 4.6631
ARSTMNGT 16.0313 13.2353 4.53692
GKTCHWGG 11.8554 9.42833 4.5083
DTAGBRAR 18.301 15.3523 4.3998
ACTMVADH 23.6117 20.3417 4.37253
AADMCAAS 9.85015 7.64731 4.33077
TAKCAWHK 7.59145 5.66602 4.24958
YGTDGKTS 13.6294 11.0661 4.19689
MRGGKCAS 18.5434 15.6031 4.17432
VTGAGTGV 8.39577 6.37874 4.11262
GRTSGTGR 5.39885 3.80065 4.04603
AWSGAWGR 10.5112 8.28741 3.72799
ATYCRTHC 3.73513 2.44612 3.64899
CBWCGGWK 7.94403 6.01969 3.60696
CGDCSGGS 3.79022 2.49316 3.59651
ATSTAYHT 4.59454 3.15882 3.48918
ARSNTGGA 15.8219 13.1533 3.47485
MTACHKAR 10.6655 8.45009 3.44705
GGNTRCWG 17.9815 15.1654 3.41115
AAMKCAWT 4.0877 2.74647 3.37364
WTTYAWAG 6.26928 4.58275 3.36083
RGCSMGGG 9.67387 7.57351 3.31103
WAMYGTAH 6.1591 4.49308 3.28471
ASHAAGNK 32.6906 29.197 3.20972
AWWCAATG 2.08242 1.17833 3.04094
ACASATAC 1.57558 0.810152 3.01618
WCAGTVAK 9.68488 7.6125 2.96371
CHASGCAD 12.9462 10.5754 2.8341
GVARTBMG 19.8325 16.9724 2.78792
GAGTBACN 7.89996 6.04675 2.72883
ACYTARSR 7.96606 6.10809 2.68862
TVGTWHTK 14.9295 12.4302 2.52899
GCMRRGCK 15.3372 12.8149 2.46018
RGCAYTYG 5.28867 3.80253 2.43995
GCGSGKGC 3.26135 2.12145 2.39288
TTAAMAAA 2.78757 1.74587 2.34446
RGMMAYWG 29.286 26.0468 2.27746
AWGWHGAA 7.18378 5.45446 2.23833
GAGTGVGD 8.14235 6.30107 2.21444
ATSRMTTB 9.91626 7.89782 2.0721
GCAGCGBC 3.22829 2.10997 2.06159
RGAGCTGR 8.85853 6.95142 2.05067
AGCWKCGD 6.84222 5.16965 2.04654
AWTMAAGD 7.26091 5.53728 2.03636
TGAAAHYR 9.0238 7.10329 2.00119

Parameters

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parameters in ini format

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