Motif finder

Task #3651 - 26a9e6d8

Status Start End Updated Duration Sequences Logs Task Bundle
finished 5 months ago 5 months ago 5 months ago 10 minutes (651sec) Positive, Negative Float, Integer, Tomtom Open

Results

Motif Occurrence(%) Expected(%) -log10(Binomial prob)
TRTTKAYH 51.88 22.1705 447.757
TTRNGHAA 38.54 17.8064 250.582
TAAMCANN 42.22 23.1041 186.426
TGWMSTYB 48.82 28.9097 182.562
GNMCTYBG 44.86 26.1747 167.683
GTWTAYHN 37.54 20.3791 161.026
RAGKYCAN 44.66 26.5816 155.763
ATYGATYN 15.06 4.85106 153.372
WYGTAGTY 10.88 2.91134 137.937
ATTDCNYA 27.18 13.54 132.038
GGKYRRDG 39.22 23.2197 130.253
AGKTCANN 40.5 25.0801 115.954
TDCHYAAY 33.34 19.6695 104.228
TACRWHTC 10.72 3.64898 95.2591
AARAYMAA 20.44 10.1183 93.546
ACTACAWY 7.82 2.12693 93.2769
GGGGHGGG 7.18 1.83938 91.7071
GGRGGHGG 10.64 3.93095 81.7316
GGGARWYG 11.84 4.67611 81.4408
ARWTGTAG 7.94 2.491 77.0342
AAMCAARN 32.72 20.8236 75.384
TTKCRWCA 13.5 6.02561 72.9476
RMCTTWGN 32.5 20.8193 72.5313
TGSMCTYK 24.54 14.5477 67.012
ACYTWGNH 38.72 26.9132 63.5214
RWKCVAHG 37.66 25.9655 63.4848
TMRATAHD 24.28 14.5783 62.8691
ACAWYTCC 9.66 3.95373 59.3356
GTAGTYCN 8.36 3.38814 50.8951
ARCRAAYA 15.34 8.28268 50.1946
GGGAGGVG 6.92 2.53144 50.0524
CGCHYSCG 4.1 1.02455 49.7449
GGHGGGGS 8.06 3.26469 48.7353
KDCSWAVG 29.0 19.5962 47.1672
HTGYCCTN 31.0 21.3507 47.008
TTWDCTWW 24.02 15.5706 44.2287
AGKMYAVR 39.88 29.6547 43.5868
TTGTYTTB 15.96 9.12613 43.1193
CGNSGCSG 4.5 1.40343 39.6823
ACAANTCC 8.28 3.70807 39.5942
GCGDBSCG 4.78 1.5667 39.1621
RTTDCRWM 27.36 18.8396 38.8039
AAAAAAAA 6.06 2.33231 38.2872
TGWMCYCA 12.74 7.08352 35.4161
KDNCTYAG 35.42 26.3607 35.1759
CNRYGWCS 22.28 14.8567 34.1549
TCSCAGVA 10.84 5.76196 33.545
GCVTGCGY 3.34 0.921585 33.4789
ATTWAYYW 15.08 9.15587 31.0724
GCHHMGBG 27.46 19.6044 31.0143
TKCRWCAY 13.32 7.82012 30.2714
WKCCMMGH 36.86 28.2258 29.9293
YCWCYRYS 37.46 28.7876 29.8835
AAYTCCCA 5.24 2.07202 29.883
WTRKTTGY 22.0 14.9861 29.5991
TTTDGHAA 18.58 12.1348 29.2132
RATHGATH 9.22 4.89328 27.0487
MTYYGTMB 24.08 17.0423 26.6267
DATTKCAH 18.52 12.3974 25.2271
TGMAATVB 19.46 13.23 24.76
TRHCCTRD 29.18 21.7606 24.6921
RGCGDCGN 4.66 1.87136 24.5864
ASSSWKRG 36.6 28.6594 23.9253
TTTTTTTM 7.0 3.45672 23.7085
WCSVTKBC 31.78 24.2454 23.5611
CCYRGMAB 26.84 19.7822 23.5208
GRGDYRGR 32.54 24.9557 23.4404
RYCWMTGH 37.7 29.7502 23.4112
GCGNDCGR 4.0 1.50624 23.309
GCGDCGRS 2.9 0.896882 22.7565
AGGGCRRR 11.28 6.71222 22.4107
AAVAAAAY 15.26 9.92679 22.1632
CTSSGWWN 28.24 21.2806 21.264
AHGCAMRC 10.66 6.34343 20.5845
RGCGNKCG 3.6 1.34341 20.5357
CTVMCYCV 26.06 19.4829 19.7563
DVGCGKCG 3.92 1.57087 19.3584
DHCWAAGS 29.24 22.4669 18.823
TCCTVNCY 24.54 18.2452 18.6325
TTHACCHH 20.48 14.7384 17.8925
TMACCYYD 17.44 12.1294 17.721
CWSCVTGS 22.4 16.4621 17.534
TGBKTAYG 7.56 4.15941 17.5066
CGMDCSGB 4.88 2.26281 17.2918
GNCSTKGM 23.32 17.3078 17.2565
VRCKCASB 31.82 25.0312 17.2458
MCWMAGTR 17.64 12.352 17.1658
ACAHMCAC 10.44 6.41127 16.9082
RCGCNMCG 3.16 1.18084 16.888
TGDHTTCN 32.76 25.9778 16.6653
TNCKRWTK 36.0 29.0362 16.4704
TTRVYTCA 13.02 8.52953 16.4503
WWTRKTTG 20.72 15.1386 16.0406
GTWGWYWY 23.1 17.2685 15.8378
GRCYMYGV 26.8 20.6518 15.4127
CWRCCAMS 14.48 9.87364 14.9073
TGWMCCYK 17.24 12.2288 14.8612
GTTCAAGG 2.42 0.807279 14.8148
CCGKAAGB 3.4 1.39014 14.7147
TAAYKATW 4.64 2.20336 14.6859
ARYKAWTK 20.36 15.0329 14.0712
CCBTTSCS 10.22 6.43691 14.0521
GVAKCSRR 21.46 16.034 13.832
WKCBTRGM 29.4 23.288 13.4343
GWGGGHGG 7.4 4.27106 13.4026
RCWYMMYG 34.92 28.4612 13.2955
DCCGKAMG 3.54 1.53025 13.1486
TWGAMTTW 7.44 4.33232 12.8934
CCGMWSCS 4.66 2.30397 12.6192
AGWCYWTG 9.02 5.58616 12.564
RTACRCAN 10.18 6.54181 12.2159
RYGARKYM 26.3 20.6129 12.1111
BTCRGWGN 31.8 25.7307 11.9078
TRHGCAAS 10.62 6.92512 11.8911
WRVTRACS 21.44 16.2471 11.8476
TACVYASW 14.08 9.89032 11.0632
WACCKTKV 13.6 9.48475 11.0334
AWBMGWAW 23.72 18.4111 10.9662
CGKCGDGS 2.7 1.07651 10.786
CGVRCGMR 3.5 1.59405 10.6413
AAKGTCBW 9.76 6.33035 10.5519
GWTCKTKS 10.22 6.713 10.4622
CWTAGHWN 21.12 16.1397 10.3739
TMRWTAVC 10.28 6.77562 10.2982
GSSCTGSG 8.16 5.06503 10.2842
CGRYGGCB 3.26 1.45531 10.1081
ARTTCYWR 15.76 11.4345 10.1008
TTGMTYTS 13.48 9.48642 9.95894
CCDCCCCD 8.06 5.009 9.95676
TCKTWSVH 29.26 23.6537 9.8909
CRCCCHCB 10.64 7.14147 9.4802
CATNCTGK 10.6 7.10864 9.47664
AVWGAKHA 35.2 29.3445 9.2339
RAGTAYAV 7.98 5.00241 9.16456
WBCKWATC 7.34 4.51784 8.84876
GCCWHCKS 16.46 12.1913 8.78355
TYAATBAW 9.32 6.11657 8.74556
WCCCCDCC 5.84 3.37306 8.5854
DKCKTWGK 23.5 18.6055 8.03552
AGANCRAA 9.48 6.32512 7.82211
GGAADYSG 7.4 4.65089 7.65346
AASAAMAA 11.46 8.00447 7.55817
AGGMMADC 16.78 12.6187 7.5452
CYGTCYCB 9.48 6.35341 7.49343
GCWMTGBS 20.56 16.0112 7.46042
GBCGMSGG 4.06 2.12177 7.37034
ACKCABYC 6.8 4.19671 7.35678
TMRATMGW 6.02 3.61889 6.88091
GCGMSBGC 4.18 2.23475 6.84315
TCRACADV 14.48 10.6816 6.82161
RRTKAHGH 30.2 25.0237 6.73666
CCYCRKCB 14.0 10.2732 6.73166
TGCGCABG 1.6 0.540462 6.58996
WGVATTKC 11.78 8.38975 6.42817
ACTACAAR 3.24 1.58889 6.38716
AWRWHCSA 24.78 20.0488 6.22736
TCGSHDCG 2.14 0.87209 6.14033
AAMCAWCH 16.26 12.3387 6.07498
CDCACTGN 13.4 9.84934 5.86063
ATCGWTAN 1.62 0.571851 5.75009
AAACSAAM 4.38 2.44273 5.70393
YAGKTCAV 14.0 10.3961 5.66188
TGAGYYAY 7.58 4.95541 5.59112
ASSCAMDG 21.56 17.1987 5.49163
YGSMTGCB 14.36 10.7333 5.48144
CRCTTCCB 5.58 3.37364 5.4304
ATTWYTAA 4.64 2.66278 5.26822
TWCAAAAB 9.44 6.52474 5.2371
WARTATWK 11.84 8.56925 5.21973
TCCCDMCS 7.42 4.85805 5.19022
TWTACKSW 8.76 5.96774 5.11542
TGRKTAAS 5.78 3.56368 4.94214
ACACYGTR 5.16 3.09142 4.77418
KAATTDCR 6.16 3.87813 4.75053
GMGCMKMG 7.56 5.00928 4.74694
AAMCAYWS 20.96 16.7637 4.73007
CGWSYYCG 2.5 1.15525 4.68121
CHYMACSK 18.24 14.2982 4.67703
TGTGBGTG 6.74 4.3599 4.53248
CTTCSTSB 11.12 8.02869 4.48981
AYTGRMTK 15.7 12.0588 4.3782
ACCWCVSY 14.18 10.7279 4.23487
GKTGAMWG 8.92 6.18898 4.18376
CCCSGCGN 3.0 1.52017 4.17026
TTTGWMCC 5.98 3.78473 4.08219
ATCAATYN 5.84 3.67453 4.06519
ADTKAMYC 14.98 11.4594 4.06073
AARAMAAG 8.92 6.20832 3.98434
AAWTMAAA 7.06 4.66627 3.96641
ADBCSTRG 19.26 15.3393 3.88262
STMACCWN 19.6 15.6615 3.80169
WCCMCCAC 3.76 2.09377 3.70973
GVATTCTG 3.84 2.15464 3.68507
GGMAVGAV 17.96 14.1959 3.62656
CBTGSGAN 15.16 11.6848 3.57001
GGGAYWYG 5.9 3.76178 3.54356
ASTCSSAG 6.04 3.87773 3.49628
GACMTTTM 5.2 3.21777 3.38495
AKAYGGCG 1.46 0.544458 3.2077
KHCCGKCG 2.3 1.08334 3.09446
CCGDCGDG 1.96 0.862505 2.97682
AGATAMGV 3.06 1.62042 2.97427
RRACTACG 1.44 0.540004 2.93508
GCAHWCAS 13.82 10.5786 2.9203
TKAHTTTK 16.62 13.0883 2.91055
MACYGWAB 11.9 8.90958 2.72513
TGWYGTMA 7.92 5.49222 2.7089
GAMYTGWR 14.98 11.6518 2.63791
CRGGGCYD 11.42 8.50058 2.63604
GGGGHTSG 4.16 2.46365 2.57772
CCAHGTGR 6.24 4.1254 2.4434
GVCTYGGH 11.24 8.37347 2.38731
TAGCVWWK 11.0 8.16438 2.38508
TGKYTGTC 6.4 4.26372 2.35624
TARTTCTY 3.54 2.00927 2.31563
AWAAGMWA 9.44 6.8296 2.25551
GWGGRGSG 6.4 4.27666 2.20743
TCSGNCGM 2.26 1.09521 2.14321
CGKKCSGB 3.68 2.12519 2.13917
RYGAAAYG 4.56 2.81299 2.00322

Parameters

Search parameters Motif filtering Positive sequences Open Contrast sequences Open Statistic parameters Add first run - exclude sequence if motif found
parameters in ini format

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