Motif finder

Task #3644 - 1dbde836

Status Start End Updated Duration Sequences Logs Task Bundle
finished 5 months ago 5 months ago 5 months ago 11 minutes (697sec) Positive, Negative Float, Integer, Tomtom Open

Results

Motif Occurrence(%) Expected(%) -log10(Binomial prob)
TGAKTCAB 38.32 6.78084 880.428
TGAMTMAB 44.7 10.002 860.896
GAYTCABN 43.02 16.2824 423.973
HACKWCCB 36.1 14.923 287.677
ACKWCCBB 39.32 17.3145 284.935
GARTCABN 47.2 24.4644 255.339
GGAMVTDR 45.76 23.7742 242.214
RVMGGWMG 46.0 24.1637 237.197
AAVVGGAA 29.5 11.9302 231.615
GGGHGGGG 13.58 3.31847 197.231
ACTMAGCD 15.96 4.89263 176.266
AKTCAYBB 43.78 25.8654 154.902
GGGGHGGG 12.24 3.31847 154.639
TKAYSTMA 20.38 8.9728 123.789
TYCDSTTY 35.72 21.0165 116.119
TTASTCAB 12.98 4.96812 96.4393
GGGGGHGG 9.96 3.20651 95.8806
RTKABGTM 18.46 8.63201 95.3962
GGCGGRGC 6.62 1.56733 92.3794
RACCWYAR 18.28 8.87337 85.7359
AANHGAAA 17.68 8.58008 82.3165
GASNWAGV 41.18 27.831 81.3029
RGGAMMTR 24.72 14.1683 76.524
CGCNTSCG 5.84 1.44699 75.7953
TRVGKWMG 23.44 13.3795 72.3136
TGACNTCA 14.12 6.61159 68.4797
STMMGCAN 30.48 19.3807 68.2381
GAADYGRB 30.78 19.7693 66.1883
GGBYSGAG 11.98 5.24517 66.0654
AGKWMGVD 39.92 27.9964 63.5214
GCGGKGCS 5.4 1.43954 62.8438
TDTGGWTW 11.1 4.79115 62.2717
RKTKCSTB 39.32 27.6284 61.2784
ACKCABNS 36.22 24.885 60.8018
TYSSTHYC 37.94 26.5211 59.5262
CGGNKCGV 8.48 3.22164 59.2837
TATYTWWA 7.04 2.40848 57.9026
ARGGGDMG 17.38 9.59018 54.8629
AKTCABYA 17.94 10.0611 54.0537
RCGTYACS 5.84 1.83291 53.7984
TYBAWTTH 21.56 12.9519 53.3345
GCGDKCGV 6.38 2.14311 53.2136
GTKGHTWN 29.58 19.6606 52.9824
CGGYSBCG 6.1 1.99317 52.9377
GGWSSGGV 18.78 10.9653 49.5042
GTCAYBSD 39.86 29.1494 48.9354
RTKACMTM 14.26 7.77025 44.2406
CGSKMCGS 6.8 2.61685 44.1942
CGWKCGHV 5.88 2.07391 44.0727
AKRWBSAA 33.82 24.1471 43.4572
GGARGTRY 12.3 6.36732 43.2717
TKTTKAWW 13.36 7.20751 42.0377
ASGSWVGR 32.06 22.7267 41.7128
TVSSTHBG 36.62 26.901 40.9975
AAWTMRAD 13.5 7.45922 39.1706
GCKWCCKK 13.72 7.63388 39.0157
AWKSAGAA 14.12 7.96678 38.4904
TASBCAHB 25.24 17.1282 37.3322
ANHGAAAS 21.9 14.3306 36.8591
ANASGMAM 28.08 19.6566 36.5608
TGGWTHBD 28.02 19.607 36.5256
RBCGHGCG 6.3 2.55037 35.89
TTRARNAA 16.32 9.86375 35.4426
TMAGCANN 37.28 28.0543 35.3213
TCWCBRTS 21.32 13.9868 34.9585
AGAMMKRR 30.06 21.5783 34.6102
AAWDSRGA 24.62 16.8265 34.4888
GGGHWSGR 20.96 13.769 33.8485
TCSGMCCS 4.76 1.71664 32.3478
GGWMGMBR 28.8 20.7653 31.292
GAVGYHVG 38.12 29.3315 30.5319
GSASSGWG 13.66 8.13833 29.4149
ACMNWGCM 29.28 21.4263 28.8674
CCTSTTTB 13.54 8.09124 28.6575
AWBCAAHB 23.88 16.7423 28.014
GRCKWCCK 13.8 8.36043 27.6506
GGCGRCGS 4.3 1.57035 27.5708
TTYGWWWN 20.78 14.1181 27.5388
WKACMHAG 22.16 15.3523 26.9143
GGMTHBGV 27.88 20.4317 26.2737
CGHMCSSG 6.56 3.07387 25.6361
AGGTCHNN 27.9 20.6599 24.2085
GWCMSWGC 20.76 14.3922 24.1505
YRGAGABV 30.5 23.0329 23.9706
RCCNAGDS 34.5 26.717 23.8412
AKTCRBAS 19.42 13.3066 23.4641
GCMYGCSC 8.68 4.68256 23.3465
ATADWTAV 7.42 3.78258 23.0549
TTDTYTTW 14.26 9.05824 22.8433
TGKGBGTG 11.42 6.79693 22.8026
GWGSGHGG 13.8 8.68933 22.7926
CGSKMGSG 6.92 3.44848 22.6084
TTGADTCA 3.66 1.33506 22.189
GKAKGYGG 8.1 4.32518 21.9901
CHAGGCWN 24.9 18.2203 21.9146
GCGDCGGS 4.16 1.65774 21.4022
CGGMCSGS 4.18 1.67092 21.3746
GHKCGDCG 4.78 2.05741 21.1447
GADCBRAB 23.52 17.1888 20.0581
TBTDGSTW 25.88 19.2949 20.0014
GBTTTSDD 36.4 28.9891 19.7
SBTGGAGV 20.18 14.3096 19.61
TGYGTMAY 10.82 6.55378 19.2628
WGSGGYGG 9.04 5.20803 18.6973
CGANDRCG 4.66 2.0876 18.0551
TBCSTGCN 22.94 16.8864 18.0396
RTGAMTYG 7.64 4.19804 17.8951
ASCYAMDK 31.34 24.5229 17.7613
RRCCTKGV 22.14 16.2348 17.5114
ATYTTNAA 6.64 3.49391 17.3197
CGMKKCGS 5.52 2.70149 17.2658
GGGGHHSG 13.32 8.71323 17.2461
CASGSWVG 20.36 14.716 17.0759
CTAGAGCG 1.36 0.265698 16.4034
AGAKMKRM 25.06 18.9978 16.0778
GCGCDCGR 2.88 1.04284 15.8838
TCSWCCCM 9.22 5.54119 15.562
TTGCMYAA 4.5 2.09355 15.0631
TCATDSTK 16.88 11.911 14.9444
WTGGVTHB 23.84 18.0349 14.924
WTASMRWW 22.84 17.1528 14.8082
RGADVCAG 28.24 22.1107 14.2676
AYACMYAC 7.14 4.02571 14.2362
THKDTCTW 18.28 13.2074 14.088
GCHYKGCY 25.44 19.6648 13.3909
DGBCTKAG 21.86 16.4904 12.9644
GTCHCSAK 10.5 6.76097 12.7399
GCKCSGKG 6.1 3.34881 12.4426
GCSKMCGG 4.2 1.99519 12.426
ACATCAYN 9.8 6.22968 12.2854
CTGRRYTV 23.64 18.2166 11.9256
WGGGCDGG 11.46 7.63733 11.6257
GMGRTGRC 9.38 5.94626 11.5566
AYGTMAYH 17.84 13.0954 11.524
CGTMGSSG 2.46 0.922158 11.1141
TGSVTDKC 24.34 18.9686 11.0109
TTTYAAAK 4.78 2.46321 10.9774
AGCSAATC 1.62 0.463106 10.8757
AGCYCHGS 18.68 13.9222 10.7443
TGAGYWAY 7.26 4.33381 10.6592
KGGABDMG 21.54 16.5292 10.277
RKGCKTKG 12.48 8.60895 10.2702
GKCSGBCG 4.76 2.48848 10.1534
AVGCYMCG 6.56 3.83473 10.0208
CKWCCKGR 12.7 8.82526 9.94444
TWSAAWKG 9.7 6.3451 9.75446
TGTNYGTW 8.98 5.76159 9.73839
CGAKCSGN 3.1 1.36493 9.71225
TYWRSTTC 17.66 13.1515 9.6173
GSAAKTCR 8.92 5.72419 9.59479
DWTMAAGD 17.18 12.7432 9.49101
AASTDGAW 9.44 6.15713 9.45437
GYSTHYGY 23.62 18.5301 9.37598
RTCDTAGY 6.24 3.63659 9.26347
GWGCGHGC 3.28 1.51429 8.8853
CWCYVTGG 17.02 12.6794 8.82192
TDACGMAH 4.98 2.71651 8.81773
SRGACAGN 17.68 13.2735 8.72721
WRYARTTM 15.02 10.9441 8.68632
RKNCAGTG 18.16 13.7185 8.56628
GGKSSGYG 9.8 6.54462 8.34207
ASCNAMCR 14.4 10.4544 8.23976
GCYBGGAK 10.96 7.5308 8.11007
WTHCKGTM 13.86 10.0284 7.85428
KGTCCCBD 11.66 8.16068 7.69393
CMGSTCBR 13.58 9.81011 7.63346
TAWRTAYV 6.46 3.91358 7.5964
TTCCCYAW 6.68 4.08964 7.53892
GCMCKKGG 8.28 5.36828 7.52358
AKMAAMKR 22.22 17.5233 7.42098
TGTTTYVW 14.02 10.2287 7.28759
RNTSGMTK 29.4 24.1928 7.22717
CMKGGMTB 23.1 18.376 7.07759
AAVAAWAG 9.26 6.21154 7.0333
ATTKWTAK 4.36 2.36053 6.94834
GVSCTKCG 5.86 3.49121 6.93871
WATGCAAD 4.56 2.51869 6.74321
ACKCAHYW 14.38 10.6197 6.59918
GAYTCAAN 5.1 2.93458 6.54138
TCDNCCTK 25.2 20.4431 6.19093
ACCCCRCC 2.6 1.16934 6.06611
AGCGYCSS 4.32 2.37954 6.04318
ASRGWGMG 16.16 12.2841 5.80283
CGKCWGCG 2.5 1.12115 5.58785
AGRYGGVG 10.36 7.26702 5.58066
GCCAATCR 1.56 0.546678 5.38196
AABNAGGA 17.2 13.2682 5.36708
TGCGCRYG 2.2 0.935347 5.34888
GGSTAGMG 3.16 1.57906 5.34531
TGAAHTVW 12.92 9.50434 5.22259
TRMGGTYY 7.2 4.69854 4.95371
AYKTSCTA 6.54 4.18271 4.73854
GKABVGAH 20.02 15.9319 4.55193
ASWWSGCA 9.62 6.7553 4.42747
GTTTRTWH 6.96 4.54766 4.41377
GACKAATN 3.26 1.69651 4.34085
GGHCGCKC 3.7 2.01691 4.30669
TTGCWWTK 7.54 5.03117 4.29951
ATWMRYAT 5.48 3.38016 4.20025
YTGGABVR 23.54 19.2393 4.09732
AGVATKHG 15.52 11.9525 3.97016
CCAATCRR 2.14 0.945016 3.94783
GGCKGGMC 5.54 3.45504 3.8152
TGTSGTMD 8.68 6.0279 3.76433
GRCCTCSG 2.78 1.38504 3.75137
GCCGMMCG 1.68 0.663488 3.67122
MCTRGGTN 9.56 6.78719 3.6128
AWNTACVA 8.24 5.67789 3.56785
TGAMTHKG 12.16 9.04138 3.51458
TGSCMTKG 9.02 6.34453 3.46108
RGAGMHSG 20.0 16.0954 3.36085
AGGCMRAG 6.46 4.22929 3.34416
CGMMKCGR 3.62 2.02055 3.16146
TTTTKWTC 5.18 3.22234 3.10167
WVMGAATD 15.94 12.4547 3.05544
TTTRRGGA 6.02 3.90109 2.99791
CTGTYTYR 9.32 6.65493 2.92238
MTGCSMWS 22.54 18.5247 2.82524
GGGTRTGK 4.38 2.61957 2.78426
GSTCTNGS 12.5 9.43343 2.75023
GCTVSGGH 12.54 9.47162 2.72675
RTCRCADG 11.9 8.9132 2.69571
ATTCTDAN 7.86 5.4445 2.68228
MARTGCTD 14.78 11.4695 2.66078
RAGGTCYN 8.64 6.11272 2.57613
ACWAHGRR 14.56 11.2857 2.56756
ARTAHMTA 4.02 2.35827 2.54958
GMARTGCB 11.62 8.68829 2.53018
TAWYTWWG 7.42 5.09303 2.51147
GYMATCWD 19.4 15.685 2.48238
GBCSGASG 5.32 3.37993 2.47569
GCASGCAK 4.4 2.65813 2.43717
YARCRRTD 21.24 17.3913 2.41023
ATWGTAHH 5.36 3.42218 2.34173
MYYTGGAS 13.66 10.5182 2.30859
GAGRHGGR 16.74 13.2897 2.28498
SGMMACGS 5.72 3.72416 2.18679
GWMRTTRC 8.92 6.40403 2.07346
GAGGKGCG 2.0 0.924307 2.01774

Parameters

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parameters in ini format

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