Motif finder

Task #3346 - 068687bd

Status Start End Updated Duration Sequences Logs Task Bundle
finished 4 months ago 4 months ago 4 months ago 2 hours (7950sec) Positive, Negative Float, Integer, Tomtom Open

Results

Motif Occurrence(%) Expected(%) -log10(Binomial prob)
GGGYGGGG 27.9683 8.92098 768.624
GGGGYGGG 26.4852 8.92098 666.176
GGCGKGGC 24.7746 9.37675 511.072
RGGGGYGG 27.9936 13.0788 391.763
RCCAATCR 5.94084 1.16844 250.29
RRCCAATS 10.2132 3.43553 229.076
WRGGGGYG 22.1117 11.5973 219.487
GCGKGGCY 22.8617 12.3015 212.496
ATTSGYTN 8.69638 2.81463 204.147
CCAATCRN 7.61776 2.41655 182.275
GCVTGCGY 12.9435 5.7137 179.87
GGGHSGAG 24.2016 14.2278 172.019
AAWSVVAA 18.3787 9.77051 169.016
ACTTCCGK 5.67119 1.54808 163.77
AABATGGC 5.233 1.34004 163.034
CGGGGCSK 21.8252 12.5571 162.711
GGGGNCGG 20.5359 11.6052 160.174
WGGGYGKG 25.3476 15.4593 159.709
TBBSWTTS 31.9542 21.5765 141.246
MGGAAGTR 8.58684 3.41787 140.812
GGCSGWGC 16.7439 9.18283 137.677
GMGGGGCG 17.0388 9.45952 135.264
GGGAGGGR 13.8788 7.11598 134.577
CRTGCGYR 7.95483 3.11261 133.73
TCSDYCYC 33.3951 23.0904 133.582
AAWWMRAA 8.46886 3.55072 124.754
TYHVKGTY 31.9963 22.2783 121.106
CGCANGCG 9.51378 4.29241 120.875
RGGSAGGG 18.7326 11.1436 119.804
RSCGWRCG 15.5979 8.72869 118.586
GKRHSTGG 32.4176 22.7704 117.693
AHMSRAAS 21.7325 13.7047 114.829
GWKSGCRK 38.5354 28.4585 113.388
TGAYGTMA 3.59821 0.903083 111.535
GGGGCGTG 5.69647 2.02343 110.379
ACGTSAYY 6.16837 2.30509 110.018
CGGSGDCG 20.8309 13.3505 101.491
GGMKDCGG 31.1283 22.3253 98.5662
RTGACGTM 3.69933 1.04412 98.3485
DGTKHGTN 26.342 18.3938 90.8236
SCGARCGV 15.0417 9.04737 87.7835
GTGHGTVH 15.1344 9.12152 87.7555
WRRCHACR 23.6201 16.1656 87.2805
WTAVMHAW 12.5895 7.19527 85.4324
CCATCTTN 5.24143 2.03606 85.1367
GGHAVSGR 36.631 27.9155 84.3344
DGCCTKGV 29.0554 21.0543 83.8373
ATGGCKRC 7.17957 3.30298 83.7438
CGYYAYCK 13.1794 7.69321 83.6846
TTKMWWTW 9.57276 5.00547 82.4508
WTTMRAAH 7.23856 3.37543 81.7277
ACDMACHN 26.224 18.7577 78.525
TKHGTMAY 8.40988 4.27932 76.7912
CGARCGMV 10.3312 5.71358 75.5104
RCCAATRR 6.88464 3.25014 74.743
WCCCCRCC 14.9912 9.40532 73.5564
AGGCBKDG 32.0553 24.2185 73.1053
GCGKWGCB 21.9601 15.2789 72.3718
AAYNAYAD 12.0334 7.0961 72.1514
GCGRCGGC 13.7524 8.4801 71.1304
GAGBYDGG 34.2209 26.3836 69.3094
GTCACGTG 2.16567 0.509498 68.9478
GWGCGMGC 9.9941 5.62181 68.4786
GTYRCTDN 20.418 14.1364 67.4824
CGGMWNCG 20.0388 13.8157 67.3769
TMCVGHYC 31.3643 23.8798 66.7784
TAWDMAWA 5.6122 2.53408 66.0115
GGWGGGGS 18.5894 12.7485 62.8144
HGTCVSTN 31.4738 24.267 60.8208
WTRNWTAS 9.15143 5.17918 60.2672
ASBGAYDV 35.7125 28.2442 59.8521
TSSBTDCK 36.1507 28.7565 57.9296
RGWGSGMG 35.2322 27.9461 57.002
AWGSVMAR 27.5975 20.9399 56.5725
ATTGGHCR 4.49145 1.96109 55.2139
TGNCTVWG 20.7466 14.9578 54.0017
GGGHTBSG 28.1031 21.5266 53.9583
ABHMRGAW 28.1621 21.588 53.8014
GKAAGTGH 6.8088 3.63785 51.3681
GRCTYKGN 34.7434 27.8043 51.2313
CCTCCCYB 22.9965 17.1619 49.1313
ATTYNDTW 9.3621 5.63199 48.9383
GSTTCCGK 7.39024 4.14264 48.0634
TDDSSWTG 23.974 18.1208 47.3682
TBAYKCAW 6.32005 3.36892 47.2734
CGRMYCGG 12.6991 8.38802 46.6796
WRSSMAGG 32.3923 25.892 46.1928
TTGSYTGN 12.4631 8.21461 46.0646
WHBSTAAS 13.3901 9.01913 45.049
STVGGTNB 34.8277 28.2547 44.8012
MAGYHCCR 29.8559 23.6463 44.2667
CCAATRRR 6.70768 3.7306 43.872
WWYRAATV 7.61776 4.43648 43.1462
CATCTTDV 5.22457 2.66897 42.9704
GCTHYGDK 27.9346 22.042 41.2848
WAHKBTAW 8.97447 5.55293 41.0244
CTTMCGGS 8.35089 5.07544 40.5372
GCAVGCGC 8.78065 5.43555 39.8042
WTYKAWAB 8.73852 5.42316 39.099
TYDSTMTS 20.5359 15.4965 38.2795
ACCWYARA 5.22457 2.76671 38.1774
ACGCCCCY 5.17401 2.73273 38.0543
TTRTTTTK 3.39597 1.50525 37.9391
GRMSGARG 30.4963 24.6132 37.9036
CGHSTCCB 27.2858 21.6769 37.2386
AGMSWNAG 23.7297 18.4246 37.2351
GTCCCGCC 5.66276 3.11481 36.9354
ASTGCGCA 2.64599 1.04444 36.9155
GTCYCYRN 28.4402 22.8104 36.1173
TGARTKHN 15.9265 11.5672 35.5513
TGCGCGYK 6.57285 3.84251 35.2084
TTBVSWTM 18.8843 14.1898 35.0447
RHTKCCTD 23.7044 18.5398 34.7498
GCCTKGSH 22.2129 17.2114 34.3047
AWGHAAAY 5.03918 2.72093 34.0521
GCBAYCGH 11.6542 7.98411 33.9112
GCWDCGGC 13.4406 9.51136 33.56
AAGAVHDA 11.5109 7.89549 33.0974
CGVTCSSG 16.4574 12.1876 32.2067
AAMWHAAS 9.9941 6.68488 31.7024
RGGWAVGG 14.4518 10.4671 31.6056
GTRGYTWN 13.8367 9.99139 30.3634
GRWGCYGD 29.839 24.5173 29.7879
WTTMKYAW 5.64591 3.28886 29.2847
GCCCCYTN 17.1652 12.9641 29.1759
RGMCWCKG 22.946 18.1789 29.0757
ARRSMRGA 33.2013 27.7486 28.9016
ACTACRWH 2.81453 1.26494 28.7724
TRWKTAYN 9.69074 6.58002 27.7659
TTYVAGWW 8.48572 5.59777 27.4319
GNAMGSAK 21.7662 17.2032 27.3996
CGGWKCGV 13.2215 9.60562 27.1714
TWCAWYTH 6.53914 4.04177 27.1479
DGTRGGTR 7.97169 5.21356 26.4232
AVKCADAG 10.8873 7.64852 26.1926
AACVAARA 3.38755 1.69939 26.1761
GCGYRCGG 9.97725 6.88222 26.1575
AGCGCRCG 4.55886 2.55267 25.9381
ACGTYACR 2.02242 0.801719 25.8827
GGGYCGGG 8.42673 5.6285 25.2316
DGDRYCTG 32.0806 26.9942 24.6647
GGSCGGGC 15.4209 11.6556 24.6518
CRCYATGK 6.22735 3.87583 24.4985
KASCHNAG 30.3109 25.3438 24.3362
GGWTNGRD 21.5809 17.2487 23.9248
CSAGGCYR 15.6316 11.8818 23.9105
MTGCCTDB 15.7243 11.9655 23.8841
ADHYGTAG 5.34255 3.20273 23.838
AGGYWCYG 9.68231 6.73668 23.6319
GGTYKCND 28.8194 24.0272 23.124
GKCTRDGK 24.2774 19.8 22.9091
GYTSRKTS 19.6174 15.5525 22.4062
AGRKGGCA 5.79759 3.60923 22.1117
WKCSHAGM 30.4963 25.6951 21.9908
ABWTDCHA 12.6991 9.4185 21.6278
TCRAAYHH 7.57563 5.06273 21.5719
CACSGYCS 11.5868 8.45518 21.5575
GVGACCSG 9.81714 6.96797 20.8737
TCDCSATV 6.89306 4.52999 20.8554
KTKSCCAG 10.6345 7.71113 19.9154
TRGAKWHR 14.7805 11.3506 19.826
AHSSTKAG 10.0952 7.25988 19.6578
GRCGCRCG 10.0447 7.24452 19.0494
GGMTCCGR 7.77787 5.34065 18.6956
GVGTMHCG 12.3789 9.29233 18.6252
TTCAGHAC 2.36791 1.14051 18.2204
AMTVARSW 16.6849 13.1635 18.0789
AAGMVGAA 5.47737 3.48952 17.8501
TYARKTTH 6.99419 4.73075 17.6527
RCYATGKM 8.24977 5.78887 17.43
WCAKTWCY 7.62619 5.2899 16.8234
AAWBBWTA 5.51951 3.55923 16.7677
WSCKWCCK 20.9067 17.1161 16.7087
AAHSTCAA 2.38476 1.18085 16.6406
AYTVGRTN 9.94354 7.28003 16.4684
TGTAKTTC 1.33142 0.499682 16.4494
GGGGYWBG 17.4602 13.9729 16.434
GRMGGTGR 13.7946 10.6757 16.2895
TAMATAHB 2.71341 1.41951 16.284
AANKAYKA 5.82287 3.825 16.1754
TGGCGDCG 7.41552 5.14606 16.0323
CGTYACGD 2.38476 1.19384 15.9528
TGVGAAHK 9.38738 6.83396 15.773
ADCCAATA 1.39041 0.543581 15.7286
TCACGTGR 2.22466 1.08833 15.6591
ACCYASWG 6.67397 4.54678 15.5627
AGMGSWAG 8.61212 6.18192 15.5011
TTMYKGKA 8.70481 6.26424 15.4337
GCGSKACS 9.88455 7.28136 15.4072
ACWGRRAW 9.75815 7.18058 15.2322
WKCAAABW 8.15707 5.81026 15.1473
TTKWWTTC 4.28078 2.63564 14.8706
GGCGRCCG 8.7638 6.34768 14.7309
TTSKCTMY 9.78343 7.23416 14.6017
TKCNTDCC 15.463 12.2808 14.5915
GYWCGGCK 9.33682 6.87029 14.1391
TGGAYAGH 4.02798 2.46026 14.1246
AGHWMCRG 17.7383 14.3981 13.9396
GTRNCTGH 15.3956 12.2633 13.9269
CAGSYANG 15.1765 12.0664 13.9038
TRYTTTGW 3.52237 2.07701 13.8686
GTCRYCGH 7.85371 5.62332 13.5758
CGRGMCGR 12.7328 9.89003 13.5706
DGRCAGYR 25.5667 21.7338 13.3476
CGARCGGB 6.48858 4.49357 13.0535
DCGMAGCS 14.4687 11.4831 13.0345
TCCSCTYC 9.58962 7.14957 12.9701
AGAMMHWA 8.82279 6.48547 12.9411
GYCTCRGY 11.8648 9.15995 12.8485
DGMCAKGG 15.4968 12.4417 12.6409
CGASKRCG 7.71888 5.55183 12.6334
WNGBTAGR 13.6429 10.7786 12.4095
TTANNGAW 5.56164 3.75245 12.347
ACCHCARS 11.907 9.22867 12.3249
GRACSCKR 14.9406 11.9586 12.314
ACSGYCBC 13.4069 10.5844 12.1268
AHDCATWC 3.33698 1.98426 12.0685
AWAKWWCA 4.0364 2.53118 12.0142
WHGGYCAC 8.10651 5.92093 11.863
GGWSGAGC 9.82557 7.41727 11.8229
TAMKRWAS 5.16559 3.44825 11.7922
GACCCCGM 4.10382 2.59425 11.7113
TGTSMATH 3.80888 2.36767 11.5032
ATTGGTCY 1.45782 0.648001 11.2099
GWYCYRGG 17.8057 14.6804 10.9585
WCCSACCC 5.55321 3.80042 10.9464
GCRRCGCG 12.2356 9.61537 10.8232
GKBCTKWG 22.828 19.3803 10.7256
RACTMAGD 5.53636 3.80648 10.4496
GTYMGTNH 11.8817 9.32441 10.4094
GGCASGGY 7.26384 5.27209 10.3204
TGAGTMAG 1.5758 0.742576 10.1957
MTNGCTTB 12.6991 10.0767 10.1379
TCMABCYW 14.2412 11.4789 10.06
TRARRYYA 10.3312 7.97248 9.91361
TGRTRACG 2.03084 1.07286 9.51604
TAGGTKGC 1.47468 0.691717 9.18286
TYWSKGTR 13.0614 10.4732 9.12362
TYGYWGTC 3.99427 2.59427 9.08644
AWGHATDT 3.61507 2.29165 9.06316
AGTCTNWR 7.12901 5.21792 9.06069
RACTTCCG 3.06733 1.86232 9.03151
TGGGKYGG 8.511 6.42376 8.94685
GWTSGMTD 7.05317 5.15874 8.93846
AAASTRAA 2.03084 1.08942 8.75077
RGTCCCVG 10.4154 8.12219 8.68905
CATGKYGG 4.74425 3.22532 8.57063
TKSGCAAS 4.23864 2.8168 8.40259
CGGCCRCG 7.4071 5.49291 8.37482
TKCSWMTC 8.05595 6.05743 8.37329
GTGTGGYY 5.40153 3.7834 8.31107
CTKGRATD 5.78074 4.11323 8.08206
WAYKATTB 3.45496 2.19644 8.07957
ARRVWATG 8.64582 6.59303 8.04338
WNCKTTGC 5.97455 4.27965 8.03776
GGCCRMCG 10.4997 8.24856 7.88344
GMGKCCGG 12.3283 9.89559 7.88182
TCTCGCGA 1.1039 0.470756 7.77234
GGHCSGGG 16.1709 13.4242 7.74534
SACYGTRS 8.83121 6.7749 7.72612
GAYGYHAK 8.35932 6.35983 7.71679
AGKWBGAG 10.6935 8.43991 7.61172
THGGTWTW 2.76397 1.66886 7.59758
AGADMDAC 7.76944 5.85401 7.51993
ATCRCRWD 4.36505 2.95477 7.49654
GSGCRAGS 15.7664 13.0739 7.45774
TWTMAAAG 1.88759 1.01561 7.39026
TCWGRATB 5.41839 3.84389 7.26054
ARVATVCA 6.35375 4.64321 7.2127
CRAYATGG 1.955 1.07417 6.97603
DTGMCAGK 7.35653 5.5275 6.90231
GRGGTGHG 9.38738 7.32459 6.79918
GMGCTKCG 7.27227 5.47314 6.55347
ASGRARMG 14.7299 12.1965 6.4847
WCTCMAVC 10.0194 7.91194 6.45041
TCGWTSGW 1.31457 0.631341 6.40585
GGRGACMG 7.20485 5.42446 6.36931
CAGCYYWG 14.4855 11.9815 6.35948
SCTHTGCN 23.7802 20.694 6.32346
CACCTCCB 6.85093 5.12812 6.14885
GCDMGGGG 14.3254 11.8537 6.11691
ATTCMYAD 3.71619 2.48327 5.91083
KTGGWCAK 5.42681 3.91973 5.78007
TTTRMASW 6.26949 4.64728 5.70656
WGCTADGN 9.4885 7.48621 5.69536
TBCTATTG 1.4494 0.738136 5.68391
AAKTVGDT 3.95214 2.68872 5.60778
GAYTSGAY 2.57015 1.57799 5.56633
TCDSRCTC 10.7525 8.63448 5.54419
TCCAATCR 1.07862 0.488196 5.51562
CCACTAGR 2.26679 1.34917 5.36522
CGYMCCGK 10.8536 8.74408 5.29271
AAWTWAGA 1.323 0.658076 5.25672
TRCAGRYA 3.72461 2.5186 5.16843
ATGWWDTM 4.23022 2.93793 5.15626
TGDKTCTH 8.7638 6.87369 5.1558
KMACTVRG 13.8367 11.4852 5.11639
ACGCAMGR 1.80332 1.0064 5.10816
GGACRCGC 3.84259 2.62055 5.04862
TGHKRCTG 12.9013 10.6324 5.02379
ATTAYNKT 2.09826 1.23015 5.01201
GGTGTGGY 3.60664 2.42996 4.9557
TMACCSTD 4.17966 2.91229 4.76605
TAGSTWTS 1.84545 1.05075 4.57709
RSCTKGAD 22.0106 19.201 4.50918
CYTSCCAS 15.6737 13.2414 4.48755
GCCCCKCG 8.78908 6.94129 4.47178
ADGTYWCW 9.27783 7.39028 4.31958
AAACCTCA 1.00278 0.458014 4.26848
GGTGGCVG 8.99975 7.14661 4.22871
WCAACRAM 2.01399 1.18863 4.17341
ACGMGCGM 3.7836 2.60758 4.16535
TCTWNCTC 6.11781 4.59896 4.1553
TSCCAGSW 10.6767 8.67455 4.06054
GAGMRAGG 7.05317 5.42712 4.0143
ACCCMCAM 3.8763 2.6953 3.91307
WYTCTGAD 7.05317 5.43436 3.89461
CGARCMCG 4.18808 2.95984 3.83897
TAADVACA 2.74711 1.77469 3.7964
GATTSGTR 1.18817 0.592796 3.75701
TAGMAWTN 3.10946 2.0724 3.66415
ACGGCGGC 2.76397 1.79351 3.64273
DGTAASTR 2.95778 1.95356 3.54222
WAGTKHAW 4.66841 3.38668 3.41977
ACYGTDSW 7.39867 5.77094 3.40247
GGNTCGCK 8.0391 6.34244 3.39201
GYASGAAG 4.20494 2.99482 3.38022
CRCTASGG 2.78925 1.825 3.32548
GCARYMGC 14.2412 12.0146 3.32331
CAGGCTKN 12.9519 10.8217 3.30695
GACGRCGR 3.89315 2.73593 3.29856
TYKATDCW 4.1291 2.93763 3.22975
GKAAKTHG 5.08974 3.7578 3.22724
TGASVTAB 4.36505 3.13788 3.22111
RTCRTYWY 7.11216 5.5361 3.09508
GCWTGCWY 4.7274 3.45451 3.0677
ACRAMTHM 5.37625 4.01569 3.03507
GCACCRTG 1.71905 0.997427 2.94772
TATHGDTM 1.67692 0.965756 2.94399
TTGVATGC 1.21345 0.626693 2.93315
GGRKWCGC 7.82001 6.17748 2.93036
CAKGCCAS 5.73018 4.32954 2.9277
RTAMKDTH 6.79194 5.26458 2.90027
TVGCCCCG 6.28634 4.81903 2.89062
GGCMKCGC 12.2609 10.221 2.87773
ATCTTRSM 2.68813 1.75935 2.87672
AYKGCAAC 1.49996 0.836927 2.81523
TCRTTWKC 2.35106 1.49283 2.77971
AGTGKHYA 5.40153 4.05327 2.74858
ACDTGRCA 2.87351 1.91514 2.72729
CCTTTAAK 1.27244 0.674165 2.67484
TAARCAAK 1.20502 0.626307 2.65935
WNCGRTCG 3.55608 2.48241 2.6379
AGGTAMGH 1.63479 0.942726 2.60671
TGCCCYGC 5.27513 3.95139 2.60367
TTKCCWAN 6.18522 4.75119 2.53746
AGGTSWGG 4.91278 3.6421 2.52014
RCGCGCAG 5.07289 3.78132 2.50573
GCCTYYGH 17.6877 15.3252 2.46629
TTRVRAAS 9.03345 7.3067 2.41424
KGGCACBG 6.62341 5.14668 2.40007
GAAGTRBR 8.0391 6.41071 2.39539
RGWMGATG 3.42125 2.38129 2.37053
CGKSCGGG 13.9715 11.8518 2.36953
AGCGGCVG 10.3817 8.53925 2.34859
GSATHCWK 9.27783 7.53819 2.28419
TAHATABA 1.17132 0.610178 2.27852
WTTCAWSW 4.01112 2.88231 2.27101
GTGGGGHK 10.7357 8.88784 2.05195
WKTATDTG 2.74711 1.83807 2.03571
TGGHTDCC 8.3846 6.74801 2.03265
AMCGGAWA 1.49153 0.850572 2.00277

Parameters

Search parameters Motif filtering Positive sequences Open Contrast sequences Open Statistic parameters Add first run - exclude sequence if motif found
parameters in ini format

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