Motif finder

Task #3641 - 130d5634

Status Start End Updated Duration Sequences Logs Task Bundle
finished 5 months ago 5 months ago 5 months ago 10 minutes (612sec) Positive, Negative Float, Integer, Tomtom Open

Results

Motif Occurrence(%) Expected(%) -log10(Binomial prob)
GGGRMTTY 23.34 8.7846 198.163
GGRMTTYC 22.22 9.21958 155.661
AAKYCCCH 25.54 12.2603 133.909
GGGYGKGG 11.84 3.68857 122.753
CGCABGCG 5.1 0.677269 121.842
GGAAAKYC 14.18 5.70063 97.1855
GCVTKCGY 8.1 2.50367 80.6734
TGAMTCAB 10.6 3.94079 80.4268
TGTGGTTW 7.46 2.28079 74.6468
TGAKTCAB 10.64 4.1336 74.2028
GGCGGRGC 6.12 1.63684 72.2546
AANHGAAA 21.9 12.3964 68.0334
GGGKHGGG 11.14 4.75045 64.3061
CGKNSGCG 8.68 3.23373 63.3366
AACCMCAD 12.32 5.56941 63.3007
GTRSTTWS 15.6 8.16526 56.692
CGGDKCGN 8.42 3.32987 54.1268
CGMHCCGB 7.64 2.87115 53.4681
WAWNCRAW 29.36 19.4562 53.1915
AWNCRAAB 24.42 15.6196 48.3039
KGCGNDCG 8.76 3.76878 46.9834
ACCAYARM 11.3 5.49191 46.9591
GCGNDCGR 8.1 3.35305 46.6883
CGGAAGYG 3.76 0.914686 46.5299
AAAMAAAA 10.34 4.86158 46.0442
WRGGGAMW 26.82 17.822 45.8503
GGVGRCSG 10.86 5.23595 45.6859
DTCCCCWN 32.12 22.6773 42.9102
ANCVAAKV 37.34 27.6647 39.88
CGDDCGGV 7.68 3.34589 38.6275
TBGYTHDG 34.78 25.4758 38.3245
CTCSRHCS 11.82 6.26496 38.0098
TRSTTWSH 36.9 27.4658 37.7439
AVYGAAAS 12.88 7.14896 36.1748
ACTTCCKB 11.86 6.39235 36.0276
CGMKDCGS 8.08 3.70746 35.9545
GCGDCSGS 7.48 3.35812 34.5278
TRSMAASW 30.8 22.2694 34.2731
CGRHSMCG 7.44 3.39481 32.7978
GGGABSGR 11.86 6.60492 31.938
WTNGMWAY 29.7 21.5073 31.9234
GCASGYGC 6.16 2.59561 31.6356
TTCANTTY 13.42 7.81712 31.6276
ASGAASKR 13.52 7.91556 31.2778
TCRSTTHC 11.98 6.77169 30.5528
ASSSABVG 36.94 28.2933 29.9909
CGHMKCGV 9.3 4.8193 29.796
AAABYACC 9.22 4.77432 29.523
DGCSTBSG 21.88 14.9109 29.2722
AWTMRDTA 11.98 6.87584 28.7104
ATARWTMA 7.44 3.56139 28.5101
GAKTCRHH 16.56 10.599 27.4529
WMCCYARV 37.04 28.6828 27.2901
CBTSGCWN 32.06 24.1456 26.8294
RSMSGAAG 17.88 11.7482 26.6635
AAAAYCMM 14.92 9.3522 26.2266
AYNYGATM 11.44 6.63295 25.7523
GTCACRTG 3.6 1.23951 24.6436
TAAAWMWA 11.24 6.563 24.335
GGCBCCGC 5.1 2.16095 24.1981
GAGDYVGR 25.08 18.1521 24.1869
GACTCABN 12.46 7.59239 23.1544
GGWGGGGN 13.38 8.36277 22.6239
GBCTKDGK 35.34 27.7129 22.0064
TTRCWYAW 13.68 8.65411 21.9289
GRWTTCMM 18.44 12.634 21.6089
GCYWMSGK 15.96 10.5979 21.0029
GMHCTKNG 35.12 27.64 20.9175
WAMGRWMR 29.56 22.5321 20.7822
AWMWAAAY 19.5 13.6134 20.7818
TGCRCVTG 6.96 3.55962 20.7712
AADTACCH 8.88 5.00526 20.1095
WGGGYRKG 18.66 12.9699 19.9402
RDTKACAK 22.1 15.9592 19.8555
ASWAMBRA 29.06 22.1908 19.7856
TAWBTAHM 17.96 12.3955 19.6814
GVAKMSAR 34.76 27.4821 19.4813
CGGCBCGS 4.8 2.15027 18.8715
CKTKCCHD 31.02 24.1381 18.4925
GDSGGWGG 14.72 9.77369 18.4519
ATRMAAYM 13.48 8.82062 17.5528
CACSTRCB 9.18 5.43603 16.7204
CGMGRKCG 3.22 1.24362 15.919
GTMAYYHR 28.5 22.1492 15.8517
GRNCGYCG 5.52 2.77846 15.5108
CWAHSRAN 36.16 29.3561 15.239
TYBATWGY 13.46 9.01979 14.91
GGAHSBGG 15.32 10.6011 14.7098
CGSGCCGS 3.96 1.76269 14.3094
MDYACCTR 18.18 13.1029 14.2582
GAAAMCCM 9.02 5.49503 13.8903
AAGAHMRA 12.92 8.65716 13.8858
AABWBGAW 22.96 17.3799 13.7746
ARABMSRA 33.06 26.6583 13.6843
AGDAKSNA 31.9 25.6185 13.3655
GWCGNDCG 3.96 1.81128 12.9937
ASGGKCGG 3.24 1.34931 12.8337
ASAGAHRS 26.32 20.5807 12.4973
AYKAYKTA 7.78 4.6353 12.2377
TTKBTTTC 14.6 10.2302 12.1354
DDCTANGR 27.86 22.0418 12.1351
CGRCSGKR 5.7 3.0715 12.1193
GGCRWSGC 6.1 3.37085 12.0353
GGAAAMCC 6.26 3.49725 11.9041
WTTTATDR 14.44 10.1168 11.8961
TGTSKKTG 10.34 6.70887 11.7382
GCYMVGWG 20.42 15.3547 11.6978
CSYTSGGS 12.64 8.65447 11.2431
WCSGMCSC 6.8 3.95252 11.0936
GAABGVAR 16.86 12.2904 11.0472
TTTCCADD 17.74 13.0912 10.7684
AAYMAAMA 11.38 7.64821 10.7206
TGACVWCA 7.14 4.24532 10.5903
GVWYGCTN 22.68 17.5283 10.5057
TMAMMTRA 14.32 10.1767 10.2422
TGASYAAB 10.16 6.68538 10.1984
HATAAAWB 17.98 13.37 10.1709
GTCSCTNV 13.98 9.90127 10.0833
MTRCSYAS 16.18 11.8284 9.83886
ASCRANCA 10.46 6.97817 9.64796
ANRTGACH 22.32 17.347 9.39119
WGDCMYTG 24.26 19.122 9.31878
RGGVAMGY 24.02 18.9128 9.24519
KWACWAWG 9.64 6.33824 9.23577
AAHTGMTA 5.14 2.81459 9.1873
CCMCRAAB 10.88 7.36775 9.17284
GKDCGGYS 8.62 5.51595 9.1548
CGKYWGCG 3.12 1.3987 9.13752
GCYCGVCS 7.36 4.51457 9.12279
ABTTAMNA 16.46 12.1548 9.10507
GAYGYMAY 8.36 5.31704 9.01987
TTAAAWWA 6.8 4.08804 8.95314
WAYCTKAD 15.68 11.5425 8.4786
YTRYGGTV 13.16 9.36863 8.40141
GCGRKSGC 4.96 2.75599 7.81876
ATAHWTAS 6.62 4.02752 7.75972
SCTMSGGS 10.26 6.97897 7.74165
CCGDDCGG 2.82 1.26007 7.53668
RCSTGGCH 13.68 9.91759 7.43758
KCGRAGGV 6.98 4.33636 7.39216
AAVTAWMA 12.06 8.53096 7.38902
TYCSDTCS 10.5 7.21332 7.37279
GNRGHTSG 27.3 22.2091 7.37207
TGCSHARG 9.98 6.77909 7.37025
GDWVGAGR 24.92 20.018 7.28561
TACVDTKV 17.7 13.4749 7.22431
AHDSTAWC 14.14 10.3519 7.1165
GWSGRCGG 5.14 2.93077 7.11541
AHKCAMYK 23.36 18.6145 7.07578
ACRBYTGM 17.34 13.1755 7.05592
GACMSRDR 28.14 23.0534 6.97981
DGGCYCCG 5.62 3.31268 6.84048
AAMCCCCA 4.04 2.14409 6.63014
CGKKACGB 2.9 1.35049 6.54812
RDGCTRDG 32.68 27.3988 6.54375
CGARCGHK 2.16 0.874861 6.45214
CWGCCYBG 17.88 13.763 6.23165
AGRYGKVG 17.44 13.389 6.081
GDCSGYGC 6.06 3.7186 5.871
WAWGCTAW 5.2 3.0601 5.73852
TGHAAYYB 27.46 22.6493 5.55086
GGAGVRCG 4.9 2.84613 5.49564
ACRMMYAC 8.96 6.11577 5.31782
GSRKCGTS 6.7 4.26826 5.29514
ATVAABTA 5.86 3.61023 5.17445
GCCATCTY 2.92 1.42735 5.00494
WCVVTGMC 21.14 16.8906 4.98155
TCCCCTWN 9.58 6.66774 4.97397
AYCTKWGW 13.26 9.83101 4.96218
WYVGAGWC 12.46 9.14454 4.871
CKKAGRDS 28.32 23.5715 4.86389
CKCGRAGG 3.16 1.61209 4.62195
TGGMKDCG 5.76 3.57344 4.58294
AAWBCMAS 23.12 18.8068 4.36769
CKHMCKGG 15.84 12.1897 4.33267
AARCWAKA 8.04 5.44994 4.23148
AGDWCARA 12.36 9.15216 4.05261
TDAAATAY 6.06 3.85775 3.96198
TTTTKAAW 7.74 5.22671 3.95102
AWMAASAA 11.16 8.12746 3.90553
ASTRCGCA 2.16 0.962988 3.81085
TTVGTMAY 6.54 4.26148 3.7441
ASWCARWG 16.4 12.7948 3.57602
TTGMDWCA 9.42 6.67957 3.50209
GGABHCGH 8.76 6.12961 3.41383
TAVATAHC 4.68 2.81279 3.36994
GGTKYGKB 16.22 12.6672 3.33265
TGSVTRYC 14.82 11.4147 3.32323
AVCKWMCK 15.34 11.882 3.30287
RGCCBKAG 9.58 6.847 3.20398
AGTTTCAH 5.02 3.08951 3.19894
YRAKMCAD 25.66 21.3697 3.18603
AWAVTAMA 11.3 8.33662 3.13648
TRTSGSTW 8.5 5.93883 3.12699
CAGASRCD 13.34 10.1286 3.10984
AAMAAAAG 5.62 3.57272 3.08853
TDCRAATR 5.84 3.7553 3.0076
AHTCRTAW 4.8 2.93099 3.00251
ACGHKCGV 3.26 1.76521 2.98073
TCDARTTR 6.28 4.12405 2.84781
TTCVAASD 12.48 9.40434 2.84153
CGAGKCCS 2.22 1.04207 2.77691
AMTKAGHW 17.18 13.6185 2.75153
GGAMGTWS 5.92 3.84319 2.71359
CNDAGCTR 17.14 13.5902 2.69859
ATTDCMYW 20.26 16.4411 2.69049
WCSGTCGH 1.46 0.55914 2.67338
CWRCGKCG 3.0 1.59543 2.61138
GGCWDCKG 12.4 9.37103 2.54748
AGCGSVCG 3.32 1.83538 2.49581
WWCTCARV 21.68 17.7879 2.47192
ATGGCKGC 2.9 1.53422 2.39431
GVCYTKGM 21.98 18.083 2.37139
WATGAWTD 7.96 5.5654 2.30563
GACABYTR 10.16 7.44498 2.30076
GGACWTTK 5.2 3.30848 2.15712
WGCTKNGG 19.02 15.3952 2.11945
GGGCMGGK 5.48 3.53672 2.10925
CGCTTKCG 1.04 0.334982 2.01449
CMCWRAGR 19.3 15.6707 2.0066

Parameters

Search parameters Motif filtering Positive sequences Open Contrast sequences Open Statistic parameters Add first run - exclude sequence if motif found
parameters in ini format

Motif search tool