Motif finder

Task #3633 - bb65f1d1

Status Start End Updated Duration Sequences Logs Task Bundle
finished a month ago a month ago a month ago 44 minutes (2655sec) Positive, Negative Float, Integer, Tomtom Open

Results

Motif Occurrence(%) Expected(%) -log10(Binomial prob)
NNNBNCWG 52.8054 29.4485 302.698
CWGNVNNN 50.0664 28.1469 271.291
DNNCWGNN 50.9794 29.0757 267.561
NNCWGNVN 49.6016 28.1469 259.97
NCWGNNNH 49.1202 27.813 257.654
DDBNCWKN 54.6647 32.9911 251.098
TSYYYHCH 10.4084 2.90905 150.947
WGGRRRVN 12.334 4.63207 115.101
CHHHCWSH 13.1972 5.25748 111.218
CYHCTBYH 7.63612 2.08999 110.122
DSWGRDDG 13.5292 5.72468 101.135
RARGNRVW 10.0598 3.79849 90.1377
DBNCTYYY 13.662 6.31081 83.6639
BYYYCCWY 6.3247 1.84361 81.5858
DGWRRRVH 16.9987 9.13232 71.8508
RRRARVWG 6.1587 1.9137 71.8156
DCHYYTKB 10.4084 4.96334 55.4644
CWSYTBYY 5.89309 2.10638 53.5604
ARDBVCWW 8.20053 3.79213 44.8883
DDDBCHCW 15.3718 9.1534 43.5837
NHCWHCCH 7.37052 3.38023 40.1569
RRAAVYVM 5.46149 2.17075 39.231
RWGGRRVS 5.77689 2.39194 38.2893
RGRHKDGG 5.17928 2.14389 33.3549
WVCWKBTN 10.9562 6.248 32.9951
VMMWTKSW 7.47012 3.74316 31.4648
DNCHCWCH 7.15471 3.558 30.45
DVDGTGDG 5.51129 2.49242 28.6641
MHMCAHHY 6.1587 2.96234 27.6852
WGKKTKBM 5.84329 2.75682 27.3747
RRRWRGNA 5.51129 2.59403 25.4656
GTGDKBHY 6.2085 3.19912 22.1662
KDGDDTGK 6.68991 3.57076 21.5781
RCAWDSWH 5.14608 2.47894 21.4734
DVAVCWDG 5.9761 3.10155 20.4187
CHYHCWWN 8.10093 4.80303 17.9685
CWTKKKNN 10.1926 6.51057 17.0696
WGRDNCHC 5.39509 2.86188 16.0076
KDSCMCYH 5.02988 2.71159 13.2815
KGDWKKWG 5.39509 2.99204 13.0268
DDMMWTGN 9.13015 5.99119 11.8028
CWSVTKDS 5.69389 3.33097 10.6888
NNHAVCTG 5.02988 2.83904 10.4711
ATKKKKKN 6.1753 3.73389 10.1052
CCWNDRDG 5.21248 3.01279 9.7353
KRWKGYHY 7.53652 4.85849 9.37568
RKGSAWDD 5.46149 3.34 7.21997
HTDKTVCH 5.77689 3.626 6.59038
VCWHCMYH 5.41169 3.34883 6.3993
KRGWRRRH 6.73971 4.48021 5.4236
DNCAWRSW 5.39509 3.40344 5.2839
CHHMARSH 5.16268 3.2724 4.42326
SHCWGNTB 5.14608 3.32528 3.40156
WRBAMHAB 5.21248 3.40534 3.00951
WGKRRDTH 5.47809 3.64765 2.63786

Parameters

Search parameters Motif filtering Positive sequences Open Contrast sequences Open Statistic parameters Add first run - exclude sequence if motif found
parameters in ini format

Motif search tool