Motif finder

Task #3351 - d070c755

Status Start End Updated Duration Sequences Logs Task Bundle
finished 3 months ago 3 months ago 3 months ago 9 minutes (557sec) Positive, Negative Float, Integer, Tomtom Open

Results

Motif Occurrence(%) Expected(%) -log10(Binomial prob)
TGGAAAGA 60.19 0.368585 11736.0
AAGASNDN 45.91 29.8653 248.899
TCCAYNNB 45.17 29.8653 227.197
AAGAWNNB 44.95 29.8653 220.93
TCCARNHN 44.35 29.8653 204.27
TTTCNTTC 4.72 1.46624 102.273
AAGASNCN 16.93 11.1475 66.0272
TCCARNGN 16.61 11.1475 59.424
TCCAYNNA 16.45 11.1475 56.242
TCTNNTTC 9.55 5.73774 50.6312
AAGAWNNA 15.9 11.1475 45.9218
AGAVSMKN 34.91 29.8653 27.0121
AGAVAHBH 30.04 25.8654 20.4425
CCANRMWV 34.14 29.8653 19.8018
RSDWNTGG 33.9 29.8653 17.7855
AGASBKNS 33.7 29.8653 16.1894
CCAVRKWN 33.49 29.8653 14.596
AGANYMMH 33.35 29.8653 13.5808
TGNNNTTC 23.96 21.057 11.8874
CCADCDBV 28.83 25.8654 10.927
AGAMSKNW 23.69 21.057 9.98316
AGATRMNB 18.64 16.2481 9.97845

Parameters

Search parameters Motif filtering Positive sequences Open Contrast sequences Open Statistic parameters Add first run - exclude sequence if motif found
parameters in ini format

Motif search tool