Motif finder

Task #3389 - 607c75ca

Status Start End Updated Duration Sequences Logs Task Bundle
finished 13 days ago 13 days ago 13 days ago 16 minutes (999sec) Positive, Negative Float, Integer, Tomtom Open

Results

Motif Occurrence(%) Expected(%) -log10(Binomial prob)
RCSAATSR 50.2358 10.84 1230.78
RRCSAATV 55.288 14.7678 1130.82
ATTSGHYV 58.2351 16.8742 1111.44
CSAATSRV 56.7363 17.5675 988.573
DRGGYGGG 52.8966 20.9548 626.761
RGGYGGGR 44.4763 15.4491 603.109
GGYGGGRC 29.5217 7.1885 567.617
RKRGGYGG 50.5389 23.129 448.739
TNYGAWTG 24.52 6.26647 433.496
AATBARMD 36.7464 15.601 333.788
TTGGHTRN 38.0263 16.8287 321.617
GCGKKRCY 29.4375 12.8613 236.997
ATTWRCAT 6.4163 0.681 219.818
DRKGGGCG 31.8121 15.6582 199.988
RGGYSGAG 22.2802 9.67974 170.148
GGCSGWGC 13.5062 4.2984 165.393
TWATTNRY 15.6955 6.37722 128.86
GGGYGTGG 10.256 3.14125 128.597
CAMTCAVB 26.8609 14.5153 124.399
KGSGCRTG 14.8872 6.05646 120.839
CGGKRCBK 25.4968 13.6033 120.769
GCGCABGC 8.10037 2.19598 117.28
RGKAGGBG 28.8144 16.6441 110.319
RCCRATMS 17.3291 7.99216 109.951
CGCANGCG 7.25834 1.90534 108.312
ACWTMCGG 5.75951 1.2873 102.004
GTSACRTV 11.3001 4.34432 98.0669
TCSRCCYH 30.1617 18.3753 96.8138
TYYYATTG 16.0155 7.49143 96.6409
YTWATTBR 15.1735 6.97397 94.5321
ATNMRAAH 21.5729 11.717 92.368
GGYGTGGC 8.89188 3.04308 91.855
RGGBASGG 21.455 11.7465 89.4454
TRATTSGA 6.24789 1.69523 87.6609
TGGMTRND 41.3607 28.8802 83.5062
GATTSGAY 5.9616 1.61459 83.3577
TGTMDNTM 22.196 12.8546 77.3316
GATYSGTR 6.66891 2.09795 75.933
AYGTSACY 8.84136 3.36941 75.0547
ATTNNCAT 10.8286 4.64352 74.3802
CTTMCGGB 9.46447 3.78516 73.7722
KAGGBMGG 22.095 12.9455 73.6932
GCSGAGCB 14.3819 7.1159 73.2791
TTGGHCRR 17.1438 9.13857 73.2436
CGGAAGTV 6.75312 2.19503 73.067
AAYAAAVR 11.7885 5.33719 72.4841
TGANYGAC 7.89828 2.88731 71.2634
TDCAAAYN 13.7588 6.75724 70.8475
TGACRTMA 5.06905 1.37314 69.3155
AMTSRCWR 26.1536 16.5015 68.8427
CSAATAGN 10.677 4.77013 66.4769
ACCMCRCC 10.4581 4.62964 66.2886
TWRMATAH 8.16773 3.26771 61.9614
AWVRCAAV 19.2994 11.3222 61.395
DAAYAAAV 12.7147 6.50545 57.1579
GDAGGGGS 17.4806 10.1072 56.9683
TTSGYTCN 18.0701 10.636 55.6041
AHCYGGAA 8.47087 3.66497 54.321
WTGTAKTY 5.64163 1.93365 54.0596
GGGYGKGY 18.4069 11.0453 52.7889
GSAWRYGD 27.0125 18.2377 52.0726
GGGNNCGG 23.4422 15.207 52.0476
ACGSCCMY 10.3233 5.03513 50.728
HRGCAASN 29.2354 20.5498 46.6207
WGCGMRCG 6.56787 2.66407 46.2644
ANMGRHAG 32.9067 23.8462 46.2356
AYGAWTGG 5.37218 1.94354 46.0469
ATTBGYYT 11.7716 6.25799 45.9704
GCKGGRCR 16.4534 9.86431 45.6196
RGCAASND 29.4712 21.0493 42.7084
CSWATCCS 9.3971 4.75539 40.3825
AMTCARGW 8.65611 4.23245 40.3677
AATTSGYT 5.01852 1.87075 39.8742
RAATKHAV 16.1334 9.97527 38.8549
GCRMGCKC 10.256 5.45527 38.4147
GGGACTTB 6.24789 2.67214 38.3863
ATYSGTRV 11.3843 6.34525 37.2742
GGWSGAGB 20.7982 13.9633 36.704
RTGCGCAS 4.32806 1.55068 35.9601
RGAKSGMG 22.8528 15.8128 35.3533
TTTGWAWH 6.58471 2.98881 35.1596
RYAARSAH 22.1455 15.2255 35.0664
THAARATR 6.51735 2.95539 34.7891
TNCVKDTC 31.8794 23.913 34.1647
WGKGKGTG 12.5126 7.36442 34.0875
ADAATWHA 7.64567 3.75939 33.8238
RSAARGSR 36.3759 28.0872 33.7101
AAGATGBH 6.88784 3.24304 33.6162
GGCHGGRN 38.262 29.9173 32.968
DVGMTCYG 31.1553 23.3617 32.9595
HAAGATGS 5.3385 2.24104 32.9038
AATVGRAR 12.7989 7.67183 32.4904
ACWACRAM 3.95756 1.41039 32.4528
TCRNTCAW 8.4035 4.38038 31.677
TGSGYAGD 12.7484 7.68978 31.4165
YHRGCAAS 16.6554 10.8616 31.2124
CGDRVGCG 16.8407 11.0167 31.1846
TATBYATW 3.85652 1.39322 30.5088
WYRCWMAS 27.6861 20.4735 30.2238
CGTYACKN 7.20781 3.59346 29.9494
RKGGSAGG 19.9057 13.7136 29.5038
TCACRTGR 5.13641 2.22504 28.8488
CTGGGMDD 30.6501 23.3686 27.8688
ATGACGWM 2.66083 0.784235 27.8338
ATCMSAGN 15.8471 10.4156 27.8009
VAATKAGV 14.5672 9.37799 27.552
GGCGKGYC 10.5423 6.23002 26.4039
GGACTWSM 8.58875 4.7495 26.2267
RGGMYGGR 24.2337 17.7621 26.0349
AATKAVGD 10.8959 6.53282 25.8951
GAWVSMGR 33.5803 26.3462 25.0421
ACGKCACR 2.91344 0.9803 24.4055
GSTGGGDR 23.2907 17.1017 24.0388
GTARTTHN 7.72988 4.21512 23.9097
TSGCTRBC 14.1967 9.32614 23.6672
KCKTMCGG 6.61839 3.45095 22.7876
AGDHMGWR 34.355 27.4246 21.7089
WWCAASWH 16.706 11.6055 21.2689
WCRRANSC 36.9485 29.9219 21.1839
AKKGACAG 6.19737 3.2315 20.7269
CGTSRYCD 14.7524 10.0317 20.2129
AATGTAGT 1.31357 0.257152 19.9881
ARGANMSA 26.423 20.3126 19.8177
TARCATYW 4.10913 1.82425 19.7485
GGGASGAG 7.10677 3.95285 19.4798
TBCTGGGW 11.1485 7.11305 19.3913
GASDAVGR 29.4207 23.1231 19.1683
RGCCTATV 5.20377 2.58682 19.1647
GMGCRAGS 9.27922 5.65006 18.911
AYYNACCA 11.5696 7.49234 18.8092
AAAARMAA 5.89424 3.09249 18.7864
KHRCTVGG 25.5978 19.6811 18.6733
WWAGAWAH 9.90232 6.15776 18.6598
YTTGTYTV 9.26238 5.66092 18.4869
TTGHYATR 5.03537 2.50081 18.3086
WCGTSATC 2.79555 1.04093 18.2753
GTGKGRCB 16.6723 11.877 17.5459
TGGGGYGG 6.88784 3.88645 17.4091
GGNCGGTG 5.25429 2.70792 16.9442
AYWTRAAA 4.41226 2.12013 16.899
TGAVTGGB 9.90232 6.27236 16.7775
KACGSAHG 5.05221 2.57776 16.5989
DKCCTGGR 19.6531 14.6033 16.1801
ASAWRMSA 17.7332 12.9688 15.6014
GGMWRAGV 31.9299 25.8662 15.5796
GCGHRCGD 9.49815 6.0229 15.5728
CCAGTVAB 10.5254 6.87611 15.2575
CSRGRTCB 15.3924 10.9701 15.2284
WGMRTDYG 17.127 12.4825 15.1247
TGCSARTC 4.47962 2.23706 14.9575
TCAAGWWC 2.66083 1.04031 14.8703
RCCTATSR 5.10273 2.70391 14.3849
AMACWACA 3.25025 1.42641 14.3192
RAAGHGAV 16.6891 12.2056 13.9709
MWAATGAR 5.82688 3.26839 13.6896
GSTHAGDK 24.0822 18.8403 13.6727
AWKTCYCA 7.93196 4.89397 13.6152
DAATTCTR 3.41866 1.5685 13.308
GACYMCGC 5.86056 3.31283 13.2895
GSADRYMG 31.2395 25.5438 12.9814
WGTGYGYW 9.12765 5.8943 12.9225
AAYYCKRA 9.53183 6.22342 12.9148
ARTTTMRA 4.39542 2.25994 12.828
RAGKRKGY 29.7238 24.1572 12.7336
TATDTAMC 2.02088 0.713246 12.6202
RSWTMCTG 13.742 9.8136 12.1679
ARGSASGA 10.8959 7.40305 12.1601
WKCAAAGN 11.7211 8.10184 12.0702
AGGYVGGY 14.9714 10.8997 11.8991
GGCSGWAS 7.99933 5.05809 11.7966
RTCKSTMD 17.2785 12.9422 11.6862
ATWYATWW 3.9744 2.0126 11.5334
TATSGCGA 1.11149 0.262443 11.3563
WASRWAVY 29.6564 24.282 11.2767
GAGABMGR 13.0852 9.35194 10.9905
SDTCKCTV 22.5497 17.7711 10.8213
TWMKTATK 4.10913 2.1396 10.7461
GGKBCTKG 18.5079 14.1387 10.6778
DAGGBRTG 14.8535 10.9149 10.6345
ABWTGTAR 4.78276 2.65188 10.2644
AYTVGGYA 6.21421 3.74092 10.2553
GYRACKCR 7.42674 4.69925 10.222
ACTTCCGY 3.18289 1.516 10.1119
ACYCTAAC 1.66723 0.56518 10.0598
ATAGGMYR 5.01852 2.84303 9.945
CVGYAGCS 14.2641 10.4698 9.90971
TARTTTDA 2.45874 1.0479 9.789
TBTGASTG 6.44998 3.95693 9.69903
TGYTTWSA 5.8774 3.51975 9.53385
AAGSKMRG 16.0155 12.0595 9.37962
TGTGYWTD 7.03941 4.44804 9.29811
AGGYRTGK 7.66251 4.94908 9.29139
DGGAMADG 21.3035 16.832 9.16866
GGRRTDTG 10.3402 7.17902 9.06217
RMGAKGCG 8.4035 5.58706 8.79915
GKCGMRCG 5.8774 3.56648 8.70238
RGACAARS 7.30886 4.70533 8.66134
CGHRMCGV 14.0957 10.451 8.58245
CRGGTCBB 15.6282 11.8096 8.48591
CTYGCKCR 5.82688 3.54533 8.38348
AGMGAHSV 22.0276 17.5994 8.30528
AKCRCRTG 5.10273 2.99163 8.27311
AASBGAMA 7.59515 4.96877 8.19419
WGYCRTTG 6.63523 4.19791 8.14972
SWAVGCAV 20.7814 16.4839 8.11852
GGCSGAGK 7.9488 5.27158 7.99518
TWYCCAKR 12.3779 9.02835 7.82718
DAVGGTGG 9.96969 6.97549 7.73164
ATSARAWG 6.38262 4.02668 7.67095
RNHTCMAG 33.0414 28.0159 7.49783
GCWDCGRY 11.3001 8.13191 7.46914
KCSGGTCB 9.21186 6.36484 7.39585
TWTMWAAR 7.9488 5.31527 7.39162
TGGACMRA 4.15965 2.32692 7.33162
WRCTMAGK 10.8959 7.83335 6.93414
ATYAGCRW 4.3449 2.48867 6.86159
KRYCTKWG 21.4887 17.3337 6.52857
AAAHMKAA 6.43314 4.14095 6.52838
GNAMGAWV 18.8953 14.9708 6.47296
WWACKGWH 12.2095 9.02 6.3939
TSBKTACY 8.92556 6.21223 6.31364
AMACACAW 3.01448 1.54977 6.03963
GCGMRMCG 5.23745 3.23134 5.86187
GCYKYGCG 8.16773 5.61568 5.83383
AKCCAACC 3.28393 1.75833 5.67475
SYTCMAGB 26.3557 21.9768 5.65466
AGGGCGTG 2.62715 1.29662 5.5575
TCSRATMG 3.50286 1.9272 5.47808
TGRMCTTG 4.19333 2.44688 5.43515
AAYATGGC 1.76827 0.731422 5.4299
TCTCGCGA 1.04412 0.314446 5.3013
GRGYMMCG 13.5568 10.3181 5.28774
ARMBTTGM 12.5295 9.41487 5.26191
TYGGTGVA 5.52375 3.49533 5.2546
GCAGGCGC 3.38498 1.85415 5.17905
TTGTTKTS 3.50286 1.94134 5.17296
ATAHAAGV 4.14281 2.4237 5.14351
ACTSAAAR 3.36814 1.84526 5.10247
AYKCTRGG 7.56147 5.16997 5.07789
WAGAWANG 8.25194 5.74983 5.05044
TWCSGYCC 6.11317 3.98997 4.93969
DCGCGCAS 5.3385 3.37017 4.90312
RCCSARTS 14.2809 11.0161 4.80033
TCCCCKCC 7.57831 5.21104 4.73611
GGWRCCKG 10.4917 7.70406 4.59766
ACCGYCCM 5.01852 3.13845 4.54986
CGGYYKCG 5.30482 3.36687 4.53417
ACACWSTA 2.40822 1.18756 4.40181
RSATGCTS 6.83732 4.62609 4.34466
AYHCATWC 3.94072 2.31901 4.20863
TKCTAATG 1.56618 0.638065 4.19755
TMGNCCCG 6.06265 4.00673 4.11639
CGGYTCSG 3.87336 2.27313 4.10377
GCAACHRG 5.01852 3.16712 4.09162
ATAWRRTW 3.85652 2.26241 4.06361
WCGGYCGS 3.50286 2.00427 3.87162
TSRAATTM 2.71135 1.42758 3.73778
GACMGADR 8.53823 6.10563 3.73718
TAKSGTWW 3.60391 2.09255 3.63745
GANSTMAG 12.2432 9.34051 3.61289
TRATTSGG 4.29438 2.62737 3.58343
RNCGATYG 5.4227 3.52592 3.56297
GRAKABGV 27.0293 22.9406 3.5556
TTAGGGDA 2.69451 1.42354 3.54612
AATDAATG 1.80195 0.807665 3.53096
TTAGARTR 2.20613 1.0806 3.50834
TGRGAWMS 11.8558 9.01882 3.42715
GCGCAGHS 8.43718 6.05104 3.38798
ACTGKCCA 2.82924 1.53348 3.26251
GWCAKGTG 3.77231 2.24232 3.23982
AATTACHD 2.96396 1.63534 3.19563
GTTYRMAV 10.0539 7.47769 3.05671
GRTVGATS 4.12597 2.52756 3.04319
SGYCGTYS 6.07949 4.10361 2.98941
TGGGASGG 4.74907 3.02496 2.96138
ATGYMKAT 2.15561 1.06843 2.88864
ACAACHCM 4.56383 2.88276 2.87807
RKGGAWSG 13.5231 10.5688 2.85398
TCSCTCCC 5.06905 3.29057 2.82943
AHATACAC 1.29673 0.508279 2.79042
AGRCAYRC 5.27114 3.45918 2.75617
AMMCCCAC 5.00168 3.24154 2.75184
GHAYTTSC 8.2351 5.93804 2.73802
YGGCCGWD 5.59111 3.72329 2.70964
ACMGRNAM 16.3018 13.1338 2.45475
AGACTMSR 5.54059 3.70133 2.44585
GSGAAGGG 4.71539 3.03571 2.38891
RYCGTWCK 2.81239 1.56458 2.31344
ASDGCAAV 11.0643 8.4469 2.28716
AWASKHAA 8.58875 6.29335 2.19833
TAANTACB 2.57663 1.39685 2.19207
ARGTMCTR 5.47322 3.66507 2.18999
CGADGSGS 9.14449 6.77787 2.16403
GCTGCYKR 12.4453 9.69441 2.11266
KCRCTGHG 11.3001 8.67649 2.10271
GCCTGGRN 14.4662 11.5217 2.03898
CCTRTCAV 6.68575 4.68758 2.01107

Parameters

Search parameters Motif filtering Positive sequences Open Contrast sequences Open Statistic parameters Add first run - exclude sequence if motif found
parameters in ini format

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