Task #1036 - 1261f11c Description: Status Start End Updated Duration Sequences Logs Task Bundle finished 4 years ago 4 years ago 4 years ago 2 minutes (135sec) Positive, Negative Float, Integer, Open Results Motif positions Motif Occurrence(%) Expected(%) -log10(Binomial prob) TTCCGCTG 5.36 0.368585 413.64 TCCGCTGN 6.39 1.46624 201.789 AGCGGAAN 6.24 1.46624 191.94 GCGGAANN 10.52 5.73774 76.2045 CCGCTGNN 10.4 5.73774 72.799 CGGAANNN 25.39 21.057 25.4549 CGCTGNNN 24.73 21.057 18.9716 GGAAVNRB 26.06 23.3573 10.6793 Parameters Search parameters Complementary Statistical test type(score) Use Bonferroni correction for binomial score Skip motifs shifted by 1 symbol Motif filtering Minimum motif score Maximum number of results Positive sequences Sequences set Open Maximum motif presence by chance(%) Minimum motif presence in sequences set(%) Contrast sequences Contrast sequences set set Open Maximum motif score in the contrast set of sequences Statistic parameters Using of real frequencies Markov state length Add first run - exclude sequence if motif found Minimum percentage of remaining sequences. 0 - disable run parameters in ini format 1 Complementarity. 0 - forward strand. 1 - forward + reverse strand. 8 Minimum motif score 35 Maximum presence of motif for random reasons in the positive set of sequences [0-100] 5 Minimum presence of motif in the positive set of sequences [0-100] pos.fst File with positive set of sequences 0 0 - neutral frequencies, 1 - real nucleotide frequencies in the set of sequences [0, 1] 1 Score type: 0 - chi-squared or 1 - binomial [0, 1] 0 Maximum number of result motifs. 0 - reveal all significant motifs [0, ] 0 Markov chain order (0-Bernulli, 1-dinucleotide, 2-trinucleotide), when using real nucleotide frequencies [0-3] 0 Unsupported param 0 Minimum % of remaining sequences. First run - exclude sequences if motif found. 0 - disable. [0, 100] neg.fst File with the contrast set of sequences 10 Maximum score in the contrast set of sequences 0 Unsupported param 0 Output results with Bonferroni correction [0, 1] a.txt Results file 1 Write integer results. 0 - real values, 1 - integer [0, 1] 0 Skip motifs that coincide with the previous ones with a shift [0, 1] Delete