Motif finder

Task #3391 - 14744521

Status Start End Updated Duration Sequences Logs Task Bundle
finished 13 days ago 13 days ago 13 days ago 53 minutes (3183sec) Positive, Negative Float, Integer, Tomtom Open

Results

Motif Occurrence(%) Expected(%) -log10(Binomial prob)
TWCYRRGA 33.872 12.5418 1211.23
TTCBYRGA 28.9644 9.60834 1185.32
RATCRATD 16.4685 4.25956 866.418
TGRMCTYD 40.9956 21.7269 744.257
GRMCTYBG 31.6344 15.4574 646.276
ATCRATRN 15.5605 5.01271 610.218
CYRRGAAN 47.9354 29.8252 571.406
CYYRGAAN 46.6652 29.3254 528.059
TRTTTRYH 38.0445 22.1006 512.911
AGKTCANN 42.6711 26.649 471.391
GKDCRDRG 45.5194 29.4594 453.102
TTKRTYTW 25.9215 13.5372 425.428
RYAAAYAH 33.0235 19.3786 409.077
TTRCDYAA 15.2038 6.23026 396.969
GGGGHGGG 6.70738 1.55642 376.863
RMCKTYGN 32.1911 19.6751 343.057
GGGWGGRG 9.60977 3.26172 333.811
CCDCCCCS 6.98843 1.91061 323.356
AWRYAAAY 23.4569 13.0414 314.261
DNCRAMGK 41.5955 29.0821 277.512
TCRATANN 18.5548 9.97645 262.19
AATRDTTA 9.05848 3.55732 243.542
TDHGYAAY 22.5165 13.9822 203.887
AAAMAAAA 8.93957 3.81533 203.397
CTTRGYWN 28.9698 19.5975 194.832
TGYMCTYD 26.716 18.0748 174.817
WGCYAAGN 21.4301 13.6943 170.625
GGHGGGGS 6.91817 2.867 163.35
TRCWYARY 24.1704 16.3349 154.173
GYMCKKBG 26.3971 18.3036 151.989
TTDDCTTW 22.9435 15.3652 150.657
AGKVCARR 35.7799 26.8821 144.798
GCYRAGBB 28.1699 20.0885 142.288
TTDCRWCA 11.1934 6.12834 138.309
TTKTTTTM 9.87461 5.23977 131.935
RANCRAMG 17.7494 11.4325 130.66
KNRCTYAG 26.3971 18.9263 126.251
AAWYATTR 11.7987 6.76799 126.088
RSTYAVTR 32.4505 24.4744 122.051
GBANRCRG 31.2777 23.4279 121.323
GRGDYRGR 33.6018 25.637 118.343
DDTGKTTG 21.7112 15.0599 117.484
RHCTMYGH 34.8395 27.0848 108.395
CRCCSMCN 11.8582 7.13512 106.606
ATVDTTAA 7.89644 4.17213 103.684
TDVGAAHK 35.4989 27.8797 102.754
WYRKTRAC 19.7438 13.7764 100.707
ATYAAYYA 6.96141 3.53799 100.691
TSRNTTCB 34.7854 27.4068 96.9574
ACBDRGAA 17.6089 12.0806 95.4594
AAAAAAAT 3.74554 1.45868 94.4092
YCWCYGHS 35.007 27.7642 92.5207
TTTCRYAA 5.43725 2.58455 91.3101
TTGYTTTK 10.1611 6.09619 89.9181
GAANYSAM 25.1865 18.9351 87.1913
AGSSDBGG 24.8027 18.6109 86.5329
GHGGGHGG 8.03156 4.52272 86.1273
AGATAARV 7.35056 4.02738 85.2287
ACBMYGNS 33.9639 27.0677 84.5695
GATTGATY 2.76186 0.981678 79.961
AWARATYA 9.33413 5.62694 79.8547
TCCNNCCC 14.5876 9.94466 78.0302
TCAAGGYC 3.89688 1.69413 78.0081
GKCCRAVG 8.90715 5.35169 76.5627
TGWMCCYD 23.1326 17.5107 73.7783
CGCBBCGS 2.17814 0.719247 69.6838
CGMNYSCG 2.78889 1.07497 69.2581
CSKSGCWB 23.2299 17.7517 69.0516
GRAGKBCR 18.3764 13.4394 69.031
TACNYRGA 9.92325 6.31601 68.2331
TTGATYSH 11.1069 7.28471 67.9224
CKTATCTN 4.40493 2.14407 67.455
WRYMTWYG 27.1322 21.3968 66.3283
ATTDCRWC 6.46417 3.65065 66.2074
YACYRTSB 22.0571 16.8495 64.4549
AGKVCAYD 29.2833 23.4827 63.6648
TRNAATYM 21.7544 16.6063 63.5957
TTRGDHAA 18.4791 13.7562 61.527
RTGMAATN 13.885 9.77384 61.2012
ARTTCYWG 13.4796 9.42887 61.1921
RSRSBGAG 27.5213 21.9469 61.1803
WSCSMSGM 24.5757 19.2448 61.1509
GGWGGWGG 5.82099 3.26194 60.1563
GGHWGGRG 14.6363 10.455 59.8246
TGHCCTRN 27.9321 22.4221 58.7134
RRCTYAGD 21.7274 16.7665 58.1912
GNGCTSSG 9.39358 6.10276 57.9586
CKWYGDAD 20.7329 15.8915 57.6126
ATGWYGHA 6.502 3.82126 57.4746
ACMCMCAC 6.01557 3.45174 57.393
DRGMDAYG 29.6995 24.1588 56.3952
TTCRKNGW 16.8414 12.5219 54.8481
GRRGHYGG 16.836 12.5979 52.3121
CBDYSTCK 27.5916 22.3663 52.2389
ATCWATYB 7.90185 5.02276 52.0404
RTWGACWY 11.0529 7.65289 50.5204
AWMTAHAA 9.48006 6.36204 49.632
WAAYBAAM 18.6196 14.2838 49.3283
GKBCRCMG 13.1391 9.49162 48.3596
TAMMYACW 12.4473 8.90468 48.0736
AABAAAAM 11.6204 8.2032 47.8904
TRYGYAWR 13.9877 10.2576 47.335
GCBHCGKG 5.4913 3.23099 46.6516
YGSMTSCB 25.3918 20.5701 46.3736
GCSRSGSC 7.46946 4.79406 46.3466
GCGHSCGB 1.9079 0.727119 45.6326
GYAYRCRC 5.86964 3.55706 44.7579
DGGKTMAR 22.1598 17.6815 44.2506
RCTCRGVN 29.9481 24.9365 43.8865
TTGGYWSN 31.856 26.7431 43.803
GATAMGVD 6.29121 3.90932 43.6264
TCDRTGBB 33.8126 28.6485 42.858
TGTWGACH 6.75062 4.31489 41.6683
WCYCYWCC 15.674 11.9414 41.2023
AGGVCADC 11.9176 8.65209 41.1106
CRKSGTKV 16.4901 12.672 41.0964
DGCGNGCG 1.60523 0.584331 40.7676
ANVTRACC 17.3062 13.4148 40.7628
TAACSTHK 5.46427 3.3175 40.6258
YRGGAMGN 22.4192 18.0753 40.478
CDGTGBKK 32.8829 27.8874 40.3375
GTTTRYWC 8.59907 5.86089 40.1947
TTAAWAWW 8.73419 6.00516 38.9468
GGKKAVAG 12.9878 9.65207 38.8628
AGADYAAA 10.8205 7.79353 38.2214
GSRWAGGG 7.02627 4.62138 37.8436
GYCVTCBG 9.55032 6.72541 37.6897
AAAMHGAA 9.56653 6.75916 36.9671
GKCKKYGB 19.5384 15.6331 35.7639
TGGGGBRG 6.53983 4.30468 34.3515
TATYGAYR 3.64285 2.0352 34.3486
WWCRAMGM 12.2473 9.18642 33.3323
TTTTGHAA 6.21014 4.06406 33.1423
WKACTWTG 7.78294 5.36844 32.8188
WAGGTWAD 8.09102 5.62978 32.6985
CGKCSSSG 1.44309 0.553071 32.0086
RCCTTGAM 5.23187 3.30278 31.9874
AWVCAASM 19.933 16.1594 31.9413
TGCKYDCY 16.4577 13.0059 31.5783
MAAKGTCB 10.6475 7.8506 31.4952
TGTVTGYG 6.89655 4.67276 31.1898
RCRKWGCN 28.7645 24.4477 31.149
GGRWRWGG 16.8793 13.4084 31.0725
WGSGKAGG 5.87504 3.84137 30.9607
CCNMGTRD 21.349 17.5271 30.5886
GWCCTHAG 5.47508 3.53074 30.402
DCRSATRS 19.1277 15.4921 30.3219
AATHCAWW 9.58815 6.9832 29.9482
ATTTCAHA 5.16701 3.29912 29.6804
CVCTGSGB 12.1176 9.24916 28.2684
GARSBGAG 9.58275 7.03746 28.0682
TGARYYAY 12.2581 9.38694 27.9012
GYGSTKRC 9.25846 6.76631 27.7854
DHCSCMGS 29.4293 25.265 27.7377
DDGAAYTG 19.7384 16.1788 27.6018
TGTMDCYN 30.04 25.8572 27.5528
TCKRWTTV 15.1227 12.0108 26.4342
GGSMGVGC 8.43152 6.10271 26.2493
KTANCTWS 15.3335 12.2141 26.1389
GRMCKRYG 11.5015 8.78854 25.9532
GRYGGMKC 6.92898 4.84788 25.5102
GTCRCRTG 2.56729 1.38469 24.8991
AWBMGWWA 21.9328 18.353 24.832
THGMTTAY 5.37239 3.57893 24.6134
GMTCKBBG 17.8954 14.6221 24.6087
AAATRNTT 11.3555 8.71062 24.5644
TTTKTAWA 5.27511 3.50202 24.5042
CCRGKGCB 9.84218 7.38307 24.4408
GTGGGGBR 4.72922 3.06228 24.3801
GRGRYGGY 7.99914 5.79258 24.2688
CWCKKCCD 19.2736 15.9237 23.986
GCYAAGAN 7.71268 5.55753 23.9376
WAAAAATM 5.62642 3.8071 23.8118
GVAKCCAG 10.6961 8.15824 23.7355
CWTGYTTR 9.8692 7.4369 23.5714
TTKATYYG 7.48568 5.37535 23.5514
AAYYRAAY 11.6258 8.992 23.4662
GRMTTCWG 10.6475 8.12714 23.4121
TWCBVYGA 14.8524 11.9058 23.1779
RRAARACR 15.7551 12.777 22.1003
WGCCADCB 19.56 16.2848 22.0939
CGVGCGRS 1.35121 0.582527 21.7714
AMATWCYA 7.36677 5.33177 21.6333
TTCAYAAY 4.22117 2.71654 21.5284
CRGCCTBG 6.89115 4.92928 21.525
RGVCACTG 9.60437 7.28408 21.3293
TTATCTSH 6.22635 4.37428 21.2663
GGKTCRHD 15.9064 12.9991 20.3279
KAAAKGTH 11.7501 9.23036 20.2607
TABGAAAM 4.52384 2.99709 19.9391
GGBWGSTG 14.6795 11.8986 19.8594
ADACRSAY 14.3282 11.5784 19.8562
TCSSHGCV 12.1392 9.59914 19.7955
GTCVMTRS 12.95 10.3341 19.7073
ATGRWTKH 14.793 12.0235 19.4075
CTGSGBWB 27.4619 23.9133 18.9438
TSSYTGKC 17.917 14.9267 18.8817
RRTRRATG 10.7826 8.42194 18.863
CDKGGATB 12.3284 9.81963 18.6295
RVCTMBGG 20.1924 17.0967 17.9742
TCGMTCBN 4.19955 2.78023 17.938
RGTGMKKR 20.3329 17.2356 17.8442
GMYCYGAG 6.79386 4.96039 17.7935
CTMAGYAK 7.01546 5.15429 17.6928
GCGSVYCG 1.15663 0.496429 17.6518
GMTTMYRD 26.4998 23.0797 17.6245
KGGGGWTG 3.3672 2.12085 17.5258
TGGTKKTK 9.31791 7.17647 17.428
AAAAAAAS 4.60491 3.12508 17.4159
GAGSRGSG 5.42104 3.81684 16.9845
ACMAAVYA 12.5284 10.0781 16.8921
RCCKGCSY 8.72879 6.68671 16.6208
AAAANTAA 5.4967 3.89112 16.6158
AKYYACCN 17.9386 15.0753 16.492
GCWRTGKK 15.9658 13.247 16.4699
RRCGVHCG 2.43757 1.42233 16.2994
CAGRGCYR 13.912 11.3716 16.2055
TWGGCAWN 14.8849 12.2723 16.0468
TTTATABW 3.70771 2.42578 16.0242
AYARACRG 7.72349 5.83577 15.7459
ATTYAYTR 7.06951 5.26816 15.6779
WMKGTHGM 18.4088 15.5882 15.1735
ATTAACYB 4.34007 2.97314 14.8062
CNCCGAGR 2.48622 1.48694 14.737
AKRAARAY 17.0198 14.3178 14.7364
THGCWWTC 6.84791 5.12068 14.3711
AGGADRGR 16.101 13.4845 14.3708
TGTSTGYY 13.6201 11.2151 13.9841
TGCRHCAC 3.59421 2.38348 13.8859
YATCYGWV 11.2691 9.07469 13.8856
RACSMTGN 16.4631 13.8493 13.8587
ATMDTTKA 7.59918 5.8007 13.7304
GWCMKTGY 11.9663 9.71581 13.7211
AGBKACAD 14.993 12.4943 13.7114
GGTCRTYG 1.76738 0.96493 13.6378
TTTGTWGW 5.08594 3.63379 13.5367
GTTRGCWN 12.9067 10.5886 13.4379
KAGCBTBG 10.6907 8.57525 13.3642
WRCRGWGH 31.6614 28.3401 13.3049
TAWAGTHC 3.74014 2.51726 13.2841
TDCCTAAB 5.76694 4.22996 13.0632
AAAGTCCK 2.67539 1.67207 12.7554
GGBCMGCS 7.23706 5.5209 12.7047
TGCKTMBR 9.69084 7.70359 12.7008
TSACYCAY 7.5073 5.75904 12.6952
GGCSABGS 7.49108 5.74531 12.6806
WTASWTAY 5.52373 4.03899 12.5089
AMCTYGGW 5.46968 3.9994 12.2983
AGACAAAC 1.65928 0.905827 12.286
ATWAAAHA 6.71279 5.08381 12.0966
TCYTAACY 2.9186 1.88768 11.7026
AGACAGVR 8.33423 6.53329 11.6668
TGATTAAC 1.14042 0.548211 11.5503
GATGGKRD 6.66955 5.07049 11.43
RTADATAG 2.54027 1.5926 11.4266
TGGGHGGR 6.51281 4.93818 11.296
AKSCKKGC 12.7284 10.542 11.1737
TCRYCTHY 11.669 9.57536 11.0765
CACTGHAB 8.9666 7.13067 10.9389
WGCSYAGB 16.1982 13.7739 10.9175
GCGGHSGG 1.21608 0.609359 10.7855
TTGCTTCW 3.56178 2.43503 10.7364
GRGTSMGY 8.65852 6.87094 10.5579
TADATARY 5.11296 3.75482 10.398
CTRAGHYK 17.1009 14.6621 10.217
TATCTWHM 5.24808 3.87734 10.2107
WKGGTYAY 11.3717 9.34845 10.1972
ACGDSGYN 6.33986 4.82947 10.1427
GAMVYGGR 15.0795 12.7814 10.0649
AWGAACDA 4.58869 3.32165 9.9087
TTKATCTC 2.3511 1.4754 9.86208
TTTRATYC 4.05362 2.87719 9.59988
GTCWACAS 3.8158 2.68393 9.36362
GTGGTWRD 6.32905 4.85246 9.2874
RKAWATGY 10.5772 8.67193 9.22645
CGVYTWCS 3.66447 2.56203 9.19001
AGCACKYG 2.62134 1.70778 9.07088
RATCTATH 2.97806 1.99807 9.0358
TTGATTAR 1.93493 1.16811 8.9609
TAAVYATA 2.29164 1.44885 8.87301
AWAAGAWA 4.82651 3.55928 8.8589
CSGVGCGK 1.1188 0.566829 8.74382
GAKRAAGV 12.8851 10.8218 8.72741
YTCSKSGS 13.458 11.3533 8.7199
AAARTCKA 2.60512 1.70447 8.64254
TAAYCYYA 4.71841 3.4763 8.55691
ACBGTGKB 11.2961 9.36902 8.49497
GATTAAHK 3.75635 2.66056 8.43808
CTMTGCKB 9.69625 7.91011 8.40813
CRCRTGSR 6.14528 4.72703 8.35036
ATCCATHY 3.24289 2.23641 8.25133
ACAKACAC 2.32407 1.48857 8.21573
GCKKGSTG 8.08021 6.45962 8.14835
GMAATBCD 12.0906 10.1207 8.13973
CRKVGWMG 12.3338 10.3516 8.03338
AWTMGCWW 5.70749 4.35455 8.03022
GAHGCAAS 3.83202 2.73663 8.02388
TKTGTMBC 9.8692 8.08811 8.00645
RAGRYGAM 8.21533 6.58904 7.98103
ATNYGWAC 6.03178 4.64241 7.9574
TGMAATMK 6.49119 5.05434 7.81152
TADCTAGD 4.17793 3.0384 7.77323
GGARAGAK 6.65333 5.20162 7.73056
TTKTMTWG 7.87482 6.29603 7.68621
AGRTGRRG 8.02075 6.42818 7.66951
GGGGYGYG 1.86466 1.13835 7.65083
TCCASSGH 7.63161 6.0842 7.53712
GTGYGCRY 2.87536 1.95175 7.52175
AGHCKCYG 7.70187 6.15356 7.40083
SSDTTCGN 5.2643 3.99667 7.22677
WYRGTATY 6.35607 4.96336 7.11248
AAATCTAT 1.02692 0.523077 7.10718
ARTKMGNT 13.0364 11.0712 6.89736
RMGGCYGM 8.41531 6.82405 6.84616
GCMSKAGG 4.77246 3.58486 6.76321
TGAAHTGW 6.9452 5.50983 6.62096
AATKARWA 6.70738 5.30015 6.55288
GAMCSTWG 3.94552 2.88567 6.34088
GGACRGMY 5.77235 4.48104 6.26286
TGGAGTTR 2.45379 1.63825 6.24651
GGAAYTNG 7.48027 6.01313 6.13129
TACATAAR 1.32959 0.758081 6.05931
TTASCAHA 4.52924 3.40021 6.01797
GTTTACCH 2.74024 1.87961 6.00415
AGCSARWG 9.55572 7.90947 5.95945
GGBAHGWG 12.3878 10.5353 5.8045
TDACSSAG 5.95071 4.65823 5.80273
TWGAMATH 9.16117 7.56064 5.72901
TASCAWAS 4.28602 3.20006 5.71377
CCKSCCTK 9.24765 7.64212 5.68545
AYCGACYD 2.00519 1.28981 5.65484
TCYTRCSW 10.8853 9.1549 5.5824
TTTTTTCY 5.12918 3.94259 5.53907
AKTTTRTW 8.62609 7.08682 5.44568
TGGYAKSS 12.2419 10.4225 5.43677
GCSTYYCS 7.64782 6.20515 5.29244
RCACARMG 8.91255 7.35812 5.26489
AATRATTK 4.5941 3.48522 5.23571
TGYKCTTD 13.1337 11.2785 5.06864
GAYGTCAY 2.21057 1.46994 5.01776
AMCCTTGR 4.46979 3.38494 5.0145
ATAGMWAM 4.38331 3.31128 4.9676
GAMGDCAG 5.45346 4.26551 4.64421
GTCRCYYR 6.92358 5.58292 4.62344
WMRGYTAC 7.5073 6.11248 4.59721
WSRCTAAG 4.30224 3.25524 4.57041
GCTGYCKS 7.82078 6.39996 4.54552
GGCTRAGG 2.56189 1.77189 4.5014
CSVCGAAK 1.38904 0.830616 4.45345
AGRGCBGG 6.51821 5.2272 4.42251
ATGTSKGT 3.94011 2.94756 4.37563
RGTRACKH 10.107 8.50743 4.36827
RACTRAGY 5.96692 4.74316 4.18908
TGCTTCVY 5.73992 4.54021 4.18879
CGKTNSCG 1.16204 0.66314 4.18588
TGAGYWWR 13.177 11.3894 4.02832
TMACTATG 1.08637 0.609713 4.00302
WACBATTR 4.58869 3.52854 3.97961
AASATTAR 3.32937 2.44505 3.67466
DAGAMRAG 10.8259 9.21752 3.65992
GDATGYTK 8.83688 7.38742 3.49313
TDCKTTGR 8.79905 7.35338 3.47976
DTACCABG 4.26981 3.26835 3.47214
GGRKGWAG 6.04259 4.84741 3.40271
DCTTAGGN 5.75613 4.59081 3.38906
YTGCTCTB 11.869 10.2092 3.37186
GVAGGSTG 8.78824 7.3516 3.33859
RGKGAAGG 5.13998 4.04626 3.25612
CCASGSAK 8.48016 7.07549 3.21304
KTRSTGAG 7.13977 5.84986 3.20784
TTATACWW 1.62685 1.04163 3.19253
AACTSAAR 5.50751 4.37751 3.18359
AGKRCAGT 4.76705 3.72137 3.10802
AKCTKBGT 10.2043 8.67757 3.06768
CYGCTRCS 4.4806 3.46996 3.06288
RGTCGATV 1.06475 0.608659 3.05835
TGAAKGTC 2.06464 1.39957 3.03899
ACTRARRT 6.24257 5.04597 3.0216
TCAGTRAR 4.64274 3.61668 2.97881
TCCDCCCK 3.97795 3.03278 2.94996
TGRKTGCK 5.28592 4.19047 2.93758
RGGMNTCG 3.21587 2.37228 2.93438
AWTRATGA 3.54556 2.65861 2.88456
GCSTTGGD 3.75095 2.83719 2.88153
TGTRTRCA 3.85364 2.92756 2.85952
ATCRTTAB 2.19976 1.51622 2.8394
RCTCAHMG 7.3992 6.10906 2.78199
GGTKGTGH 4.42655 3.43675 2.70714
TSGCACNG 5.93449 4.78829 2.60501
AHATGCAM 4.41033 3.42894 2.54878
KCKTATCR 1.97816 1.34242 2.49358
AVAKMGAA 10.5394 9.02741 2.48185
GGTGTSGB 3.60502 2.7257 2.45906
CGCCVTCK 1.1242 0.664119 2.43402
WCYGTGAM 7.59918 6.31954 2.28648
AMGWCCKT 3.44287 2.59295 2.233
WGGCSCCG 1.18366 0.713345 2.23
TCVTAKCY 4.79948 3.78898 2.20569
AWCCRAGK 4.29143 3.339 2.18173
DCCGGNCG 1.03232 0.598914 2.17395
CGTMACBV 2.3565 1.66564 2.16887
AGBCSTTG 4.53464 3.55545 2.15875
GHTGGACK 3.89147 2.98782 2.15221
SCYRTGCB 13.7769 12.0947 2.1068
ACYGAABC 3.18884 2.3781 2.08569
CRCASACB 7.90725 6.61534 2.06194
GTWCWMTG 6.88574 5.68003 2.04992
WACSACAH 4.91298 3.89913 2.00694

Parameters

Search parameters Motif filtering Positive sequences Open Contrast sequences Open Statistic parameters Add first run - exclude sequence if motif found
parameters in ini format

Motif search tool