Motif finder

Task #1597 - 4ca21ebb

Status Start End Updated Duration Sequences Logs Task Bundle
finished 1 year, 2 months ago 1 year, 2 months ago 1 year, 2 months ago 4 minutes (272sec) Positive, Negative Float, Integer, Open

Results

Motif Occurrence(%) Expected(%) -log10(Binomial prob)
GATRARGC 60.44 1.46624 8195.99
CYTYATCN 61.77 5.73774 4878.6
ATRARGCN 61.59 5.73774 4853.0
YTYATCNN 68.15 21.057 2222.6
TRARGCNN 67.82 21.057 2192.86
TYATCBNN 61.52 29.8653 929.59
RARGCVDD 50.86 32.9098 299.12
TYATCANN 23.4 11.1475 261.747
RARGCNCN 30.68 21.057 112.209
DYHHGATR 42.02 32.9098 80.5712
RARGCTDN 23.53 16.2481 77.9199
ARGCGDNN 38.17 29.8653 70.3891
ARGCYVVH 40.79 32.9098 61.0717
CNHNGATR 37.49 29.8653 59.8463
GHYGCYTY 12.92 8.48244 50.0561
ARGCANVN 36.64 29.8653 47.8736
DRDDGATR 39.12 32.9098 38.9562
ARGCHNTB 28.46 23.3573 32.2147
DYNGGATR 20.2 16.2481 25.4773
ATCTHVVN 37.52 32.9098 22.5376
ARGCYNVG 19.62 16.2481 19.2276
ATCRKDVB 36.78 32.9098 16.5431
YATCDCRN 19.09 16.2481 14.3261
DRCNGATR 19.05 16.2481 13.988
GYGGCYTB 5.85 4.3348 12.6485
ATCMMNDS 33.01 29.8653 12.1307
RGCGDRBY 26.22 23.3573 11.7193
ARGCGCVN 10.19 8.48244 9.5845
ATGNNTTA 7.13 5.73774 9.06394

Parameters

Search parameters Motif filtering Positive sequences Open Contrast sequences Open Statistic parameters Add first run - exclude sequence if motif found
parameters in ini format

Motif search tool