Motif finder

Task #3343 - 6268e58e

Status Start End Updated Duration Sequences Logs Task Bundle
finished 4 months ago 4 months ago 4 months ago 43 minutes (2594sec) Positive, Negative Float, Integer, Tomtom Open

Results

Motif Occurrence(%) Expected(%) -log10(Binomial prob)
TRTTKACH 46.6707 12.9314 1672.6
GTMAAYAN 47.4649 13.8824 1604.41
RTTKAYHY 55.2404 29.5329 703.06
TTTRYHTW 44.5589 24.0844 489.637
TMAAYADB 48.931 28.7039 443.301
AAYMAAYA 21.0228 9.65303 278.087
TGRMCTYD 32.289 18.4247 266.234
GVMCTYDG 36.9753 22.3831 262.844
RAGKYCAN 38.4501 24.0076 247.99
AARCAARS 22.8903 11.7095 236.377
GGGHGGGG 7.60974 2.06962 217.655
TTRHTTWK 35.6837 22.6347 209.492
GGGGHGGG 7.4352 2.06962 205.939
KACHTWGN 32.2541 20.3991 184.079
GRGGBHGG 21.4242 11.9439 169.878
AGKTCRND 29.1736 18.4823 159.491
AAAVAAAA 15.6645 7.93258 154.581
TTGACWTW 8.49987 3.31207 139.815
RGDCHRAG 36.7222 25.7071 138.662
WTGTWTGY 14.1897 7.26901 133.405
TRWTTGCW 14.085 7.49521 118.481
ACTTDGNH 32.2018 22.4019 118.291
TVRCTHWG 30.3168 20.9787 111.675
GGYVGRVG 21.5638 13.7185 105.498
GTHBACAR 19.7836 12.4101 100.335
RSGHWSGR 35.2649 25.9878 96.5224
CTWKGYWV 37.7084 28.7354 85.0227
GVASGNMG 22.4016 15.1694 82.7245
RRGAHAGR 29.1299 21.0547 82.271
RCCTYDGY 24.5309 17.0359 81.723
TTYGTTYG 6.10001 2.5964 80.285
GAGNNAGG 20.8482 14.001 78.4767
TRYGTAYN 15.4464 9.60297 76.3722
TTRDGYAA 14.8617 9.21932 73.459
WGVGRYRG 32.6294 24.6051 73.2587
CGCSBSCG 2.09442 0.442022 72.6777
RCTCRSKV 23.8764 16.8857 70.9905
ATMRAYAB 17.5583 11.5072 70.8206
TTKYTTTC 11.5193 6.66857 70.5229
TTKAYWSA 22.803 16.0029 69.7276
AGMYARGV 25.7003 18.5875 68.5639
AAYWARRM 32.6206 24.8453 68.0038
ACWRAGMH 29.4354 21.9947 67.0076
TAAYCCYA 4.67755 1.88359 66.8221
GCMCYGNS 21.2933 14.8434 66.0474
ARAMHGAA 17.3924 11.6032 64.0504
AARAAAAB 16.1707 10.601 63.6198
WYCSYABC 21.7122 15.32 63.18
GCGNGCGS 1.94607 0.435568 62.4276
CWCCDCCS 9.55581 5.37575 62.3563
TAMRYABA 20.6039 14.4708 60.4778
TSVMYTYC 37.08 29.3835 60.1293
GTDYGYAY 11.7375 7.21307 56.9739
GTYCAARG 6.10874 3.01317 55.3999
AWTCVATB 10.4023 6.22094 54.9005
YTGYCCTB 19.4083 13.703 54.0266
AGSSCMGV 20.9617 15.073 53.5289
AANHGAAA 17.2528 11.9188 52.4576
RCAWRCAS 21.3806 15.5303 51.481
MTSGRATB 14.3381 9.52236 51.009
CGBKCGSB 3.57797 1.41679 50.6676
TRTYKATM 10.4983 6.42529 50.4168
TCNGCYTC 9.5209 5.6942 49.1573
ACRCRCAC 6.34436 3.31229 48.8023
AWTVABTA 11.5891 7.36159 48.3314
VKCACYGN 25.744 19.5711 48.268
GTSSKNGG 16.8514 11.7525 48.068
ACCMCSMC 6.46653 3.43311 47.2971
GAAYKVAH 18.012 12.7917 47.0503
SGCGDCGS 1.64936 0.403763 45.9217
TTAWCTWD 9.18056 5.52097 45.8965
RRWKAAMG 22.7158 17.0278 44.804
CACSCMCV 9.50345 5.81851 44.3873
CCABCACB 9.49472 5.83859 43.4866
TGYMCTKK 21.1537 15.727 43.0074
CRGCCYBG 11.3273 7.32904 42.907
GSASGHGG 9.7827 6.08516 42.8942
TSCSTSCS 9.95724 6.23244 42.6341
ATSAAYDA 8.52605 5.11958 42.0652
SCTMASCB 16.6245 11.8412 41.3457
ATTYGYWT 7.45266 4.32794 40.7158
GGKCRYNG 14.1548 9.81212 39.394
GCMMGSCY 14.4777 10.0885 39.3359
KACRGAKN 18.876 13.8983 39.2506
GSCTGGSC 8.07226 4.85435 38.9754
AARBAHGA 17.3488 12.5829 38.8089
CRGGCHSG 9.33764 5.90601 37.3209
TAYVYAAB 15.9002 11.4057 37.0678
GGWYRGKG 11.6502 7.82857 36.3804
CSYTCCSK 7.33048 4.38547 35.1989
TTARAAAW 8.10716 4.99413 35.1782
GCSGYCGS 1.38756 0.354338 35.072
AKAGYRAR 15.1671 10.8681 34.9537
DRCTCAGV 21.2671 16.2733 34.3838
AGMCYTKG 12.3309 8.5165 33.3713
TAAAAWWA 8.25552 5.18503 32.8367
GRAGHYVG 21.7035 16.8431 31.234
TAMHYACB 18.204 13.7158 31.0826
GGAWVGAN 15.682 11.497 31.0615
TCACTGNV 13.4392 9.55908 31.0187
AWRTACAH 10.891 7.40681 30.9254
YGAVCBAN 24.496 19.4323 30.4586
CGVMGCGS 1.597 0.496047 30.3989
WMYTAACY 9.18056 6.01644 30.3359
GASNTGGV 21.5551 16.775 30.0945
DRCSAAHG 16.2667 12.0998 29.2433
GGRGGGGG 3.40344 1.63615 28.9042
ACMTWGHH 23.7543 18.8557 28.7997
AGYGAKYB 11.9993 8.43228 28.6982
GCGGVSCG 1.18684 0.30627 28.3069
TSMKTTCB 18.0557 13.7342 28.2868
AAATHRAA 9.48599 6.39749 26.8495
GAAADGWM 13.3694 9.69871 26.6842
GYAYGYGY 6.46653 3.96992 26.4111
CWTGYTYG 8.21189 5.38357 25.9471
CWCYGTRN 26.8697 21.9251 25.8732
TGYCTYWG 13.0029 9.42789 25.7187
TKYAATCC 3.92704 2.06968 25.6165
AAGAAMAA 5.42805 3.19452 25.3529
GATTDCRD 8.63077 5.75114 25.281
KVCMAAGS 24.2342 19.5255 25.2541
AWKCYARG 14.9489 11.1485 25.2285
KTRCTMWG 14.9228 11.1288 25.1653
WCSSAGCD 11.6764 8.33121 24.7751
ACCCTAAC 1.27411 0.37723 24.6642
TTGGHTTB 12.4444 9.02025 24.1551
RRYAWGCR 16.1096 12.2561 23.7053
AWSRTKAA 11.3622 8.11411 23.6449
RGCSTRSG 8.09844 5.37814 23.5653
KCCKCCCN 12.1913 8.83305 23.5033
TTBGTWRW 18.3786 14.3022 23.4257
GTACTTDG 2.7053 1.26646 23.0664
RTYBAYYG 18.8847 14.7952 22.8281
TGYRTGYG 8.7704 5.96246 22.8061
TWACCTTD 5.87311 3.6236 22.508
GGGATTAM 2.11188 0.887947 22.4749
AAARATYA 6.23964 3.92515 22.1409
AGWCCAKS 9.14565 6.35491 20.8967
AGKTCABC 6.24836 3.98384 20.5796
TSGAAYTC 2.98455 1.50853 20.3952
RCSTKCSY 14.1635 10.7189 20.3444
AWWGASAA 10.5856 7.60468 20.2947
TAMTTAAV 4.18885 2.39061 20.2274
MTTAWCYN 15.9613 12.336 20.0212
WMKGTMGH 13.8756 10.496 19.7765
TRGWATBK 14.8006 11.3222 19.6583
MGABGRMR 22.1136 17.9881 19.1769
AMCWYBGA 16.0136 12.4495 18.9159
AACCCTAA 1.50973 0.566538 18.8324
AMYGAADM 14.0501 10.7252 18.4528
RCDTRGTG 7.94136 5.45819 18.2248
ARHYAYYG 26.4421 22.1276 17.7416
KAGMCSRG 8.58714 6.02391 17.6735
TGCGCRYG 1.09957 0.347076 17.6713
ATRTRTAC 2.72275 1.38626 17.3394
CRCWCACS 5.86439 3.78883 17.2805
GASSKRMG 11.9033 8.9132 17.0034
ACCMTGYC 4.70373 2.87709 16.9771
CSGGKCGN 1.7279 0.72574 16.8777
CGAVCGBN 2.12933 0.987373 16.8524
DNGMAATG 19.068 15.3573 16.7901
CSTMCSBD 16.9212 13.4087 16.6943
CAGCTACK 2.05079 0.93836 16.6584
GGDCTACR 3.38598 1.89329 16.1732
ABGWAGMN 24.5135 20.4774 15.7683
GRASGHTG 8.79658 6.30621 15.3842
AGGGYKRG 8.37769 5.96023 15.1526
TTYGAGAC 2.24278 1.09956 14.9013
CGYCGCCN 1.1083 0.380053 14.7843
MRCTBGGS 17.2877 13.8749 14.7315
TVSVTTCD 23.0736 19.2153 14.7269
WDGGMAMG 17.6542 14.2157 14.6405
ATYKHATY 12.0342 9.17424 14.4015
AAACCAAM 4.32848 2.6718 14.1139
CGSWKNCG 2.36495 1.20105 14.0673
CHGCWCBG 12.2611 9.40305 13.9255
GCCSYWSC 9.08456 6.62957 13.8176
TTTMRAAA 8.07226 5.76521 13.762
AGTBCYWG 13.893 10.8779 13.6196
CAGSYCAG 9.31146 6.83914 13.5474
GTAGCTGG 1.64063 0.720106 13.5132
GWTCKHDG 14.5912 11.523 13.3568
TGAMWTHW 22.2969 18.6095 13.2581
WCSCRCSC 5.03534 3.26367 13.23
KCBTCCKG 10.0009 7.45539 13.2131
CMAKGTYS 12.4007 9.57272 13.1667
TAGCTGGG 1.87625 0.88579 12.9198
GGMVGAGM 11.3273 8.63677 12.9067
AKCACKYG 4.06667 2.51003 12.7227
AWATGBAW 9.91361 7.41376 12.5779
AGAAHHAA 14.1635 11.1956 12.4812
CGSMCGGB 1.44864 0.614537 12.3489
TCRKTWWC 8.35151 6.08222 12.1514
WRGCMCYG 13.1774 10.3323 12.1218
ATTWAVAA 8.16825 5.93362 11.9741
HGTRGACD 10.123 7.63507 11.8931
TCRAKRCC 4.35466 2.77345 11.6301
GCACDCRC 4.13649 2.60208 11.569
CSCMCCCR 4.5641 2.94643 11.477
DAMGCAAK 7.32176 5.24078 11.3401
TGGTGGYG 2.54822 1.39293 11.322
AACCRAHC 3.72633 2.29732 10.9974
GRVMTYCG 4.47683 2.89329 10.9948
GGGGAHGG 3.01946 1.75567 10.8777
TGAKTVAB 13.2909 10.5256 10.745
GTGBGGTG 4.10158 2.60388 10.6823
GACTCBGN 7.23449 5.19883 10.6629
TTCRAGGC 1.99843 1.01604 10.4951
TGMKTTKS 15.6995 12.7392 10.3742
GTKCCMGG 4.49428 2.93074 10.3408
TGKYTGYC 11.912 9.31495 10.3278
DGCSGCCG 1.09085 0.420982 10.2937
ATMTWTGC 3.26381 1.96119 10.2208
CKGSGHAB 15.4726 12.5496 10.1349
ATRHAATW 8.45624 6.28326 10.0239

Parameters

Search parameters Motif filtering Positive sequences Open Contrast sequences Open Statistic parameters Add first run - exclude sequence if motif found
parameters in ini format

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