Motif finder

Task #3659 - 02f7e40c

Status Start End Updated Duration Sequences Logs Task Bundle
finished 4 months ago 4 months ago 4 months ago 8 minutes (526sec) Positive, Negative Float, Integer, Tomtom Open

Results

Motif Occurrence(%) Expected(%) -log10(Binomial prob)
TTRNGHAA 68.64 22.6872 1028.08
TDCNYAAY 60.34 26.2104 550.263
TRNGMAAY 53.36 26.8118 333.478
TTDCRWCA 28.84 10.7293 261.208
TKCDWCAY 32.06 15.948 164.449
GRMCTYBG 26.66 12.6041 146.714
RYGCAAYN 32.52 17.2562 140.946
TGDMCTYK 36.06 20.5669 130.679
GWYGHAAY 24.72 12.0365 124.018
RAGKYCAN 42.08 26.3638 117.549
GCWYAAYN 31.42 17.537 115.561
GGDCRNVG 34.36 20.4878 104.737
AGKTCANN 39.24 25.527 90.062
TRTYKAYH 37.38 23.9496 89.3331
YGMAATMN 33.98 21.0837 88.5624
TTTDGHAA 25.86 14.5877 85.8225
DMCTTYGD 30.22 18.7791 74.3195
ATYGATYN 14.26 6.51822 73.6126
DHCRAAGK 30.02 19.0388 67.5143
TDCVHAAG 29.18 18.5507 64.1215
TTKRTYTW 25.34 15.3894 63.7191
GGVDGNGG 26.22 16.1671 62.8044
WTRTYKAY 25.2 15.4169 61.3805
TDKGTAAY 15.74 8.258 56.9222
GCRAYVBY 40.32 29.1272 54.07
TTGCYTCA 8.72 3.58599 51.8717
GRGGHRGR 21.18 12.8967 49.2312
AAAMARAA 14.44 7.70053 48.3626
GTTTRYWY 22.7 14.2505 47.466
CBTGGCHB 28.74 19.6958 43.0274
GWHCRARG 16.68 9.71456 42.6165
KYGWAAYB 30.26 21.3743 38.8926
DCSSYGSS 20.9 13.3844 38.4219
AMTRTYKA 16.68 10.0592 36.8892
RRVGRCRG 28.48 20.0802 35.727
TDCHAAAY 25.84 17.8017 35.4246
TRTTYGYW 20.32 13.2572 33.5417
KRDGMAMG 35.5 26.6963 32.5549
TGWMCTHM 22.56 15.3466 31.0191
DCTCNGYS 29.52 21.5354 29.9506
CBCNSCCK 19.04 12.4894 29.5829
DAKCRATS 17.44 11.1817 29.3644
KRNCTYAG 26.76 19.2453 28.239
CVGYGDBK 33.7 25.5439 27.7736
TCYGTCBY 9.66 5.2291 26.8104
RDCTCNGY 32.34 24.4274 26.5807
CDBGGTBR 26.1 18.8708 26.0589
ATTBCWAA 13.22 8.05348 25.3025
DGCCAAGN 17.98 11.9765 24.8293
AGTMYANR 21.68 15.1799 24.2022
CDGCCYBG 15.6 10.1028 23.5243
GRTGRBGM 14.1 8.91112 23.0844
GGSRNGMG 14.52 9.27198 22.8121
ATCRATAS 3.36 1.15375 22.5407
AWAMAAAK 15.3 9.95269 22.2548
TTKTTTTM 10.44 6.09789 21.7987
GYHCTYBG 25.2 18.5381 21.4156
GRRTTRDG 18.66 12.9098 20.6066
RRCNCYGR 35.6 28.1539 20.3833
ACRAABAH 17.06 11.6068 19.9697
GAADYCRN 28.06 21.2844 19.771
RBGMAMGM 26.14 19.5766 19.5558
AAAKHMAA 22.98 16.8291 18.9218
GYAMDCAS 25.3 18.913 18.7396
AGMCDKNG 31.7 24.9138 17.2963
AAWVRTTA 12.58 8.16698 16.471
GGKMRVTG 19.62 14.158 16.2085
STCVSYGB 27.2 20.9982 15.5574
WGGGSASR 17.92 12.7622 15.4049
DMATTSCR 20.72 15.2271 15.2087
AWVRTTAA 10.92 6.93956 14.8738
GWGGGHGG 5.72 2.96648 14.5234
DRRTRTYG 29.82 23.6102 13.9303
GAAGCRAY 5.08 2.54987 13.7054
WCHABGYC 20.84 15.5063 13.6302
CWMYGYTB 35.56 29.021 13.603
TYGCAATM 7.4 4.27007 13.4191
TGCCCTBK 10.96 7.13385 12.7598
RSDKGGTG 17.42 12.6077 12.655
WWTRTTYG 16.8 12.07 12.65
CVCYGKRB 30.98 24.8648 12.6192
TAKYTMRY 16.38 11.7146 12.5734
RGAADHCR 26.66 20.8825 12.5683
DAGKACAH 15.46 10.9658 12.139
ASSSMGGM 15.32 10.8538 12.0563
CCADCYCB 15.12 10.693 11.9471
AGATAARN 8.54 5.27747 11.5418
TRDCTHYG 23.14 17.8137 11.5342
GCDWCAYR 16.28 11.7791 11.11
CTRSGRWB 22.98 17.7345 11.0162
ACTMNGNW 33.08 27.0785 10.9081
RGAKGRMG 12.44 8.52335 10.8364
AACWRAAM 15.54 11.2783 9.77485
TTAAAAAW 4.22 2.12253 9.77332
YRGGTCAN 16.34 12.0044 9.50916
TTTAAAAA 3.04 1.3491 9.05891
TDRTYTTG 16.34 12.0566 9.04324
TCHYAAYY 20.62 15.872 8.93375
TYKATYGM 10.98 7.47442 8.91192
RTGGBGMR 12.98 9.16829 8.86201
RGSAWVGG 18.32 13.8658 8.52409
AATTCYAN 7.44 4.62397 8.46413
TCCHKCCC 6.98 4.27032 8.33442
TCRGYGRY 7.24 4.48447 8.20038
ACDTRGWM 12.98 9.24082 8.14277
RVCTYRGR 31.2 25.7473 8.07632
AYRCRCAC 5.78 3.36516 7.96396
YYTATCTS 7.56 4.76102 7.89002
YGTAAYYN 17.24 13.0051 7.71812
TBATCTBY 18.7 14.3328 7.50041
CBHAGCAB 17.84 13.5853 7.33842
WACCWTKR 13.64 9.91016 7.18698
GGTGRBRG 8.5 5.58135 7.10209
AWRAAAWC 11.9 8.42527 7.08415
WTCTVTCY 14.1 10.3299 7.00199
CRKCTCHG 10.02 6.86514 6.79177
GCRDAGGB 11.98 8.53872 6.64244
SCMSGARS 15.38 11.5042 6.53662
TCTGYTTV 12.12 8.6773 6.46323
TGAMCYGW 8.16 5.36223 6.39245
TKAGTHAY 10.48 7.29896 6.29068
WKCSTGSC 13.94 10.2796 6.21467
WMCVCMGH 31.2 26.0593 6.18363
AAVCAAGM 10.28 7.14474 6.14099
ADHTACYA 10.94 7.7064 6.10791
KMACTRDR 34.06 28.8076 5.98928
AGCRGHGV 11.74 8.42179 5.79294
TCVVTTCY 13.06 9.58644 5.57089
KCVTAMGH 9.82 6.84737 5.20699
CCDGCCTK 8.22 5.5177 5.14336
TWTACNHA 13.4 9.93977 5.07815
GGGTCAVD 9.38 6.49108 5.06175
GRSCBGNG 19.46 15.3484 5.0592
ARYKAWYG 15.52 11.8257 4.93794
AYYCHASG 12.58 9.26256 4.75128
AGRMCDTK 21.36 17.1294 4.7342
CGCAASVS 3.78 2.05904 4.61667
ATTWAYTY 9.02 6.23644 4.56411
AATTGATY 2.9 1.43305 4.55413
RCNKHGTG 28.28 23.5901 4.54005
ATGMGGMA 4.02 2.24804 4.40309
AGRACRAA 5.32 3.26255 4.08684
AAVABGAA 12.44 9.22544 4.02319
KAGAYGRB 10.02 7.15617 3.83383
RACATTYB 15.48 11.9411 3.78835
STAWVTAS 9.04 6.33712 3.70391
AAWKMGAA 7.82 5.32156 3.63543
ATRWTTGM 11.26 8.27583 3.36094
TTRCYACA 7.1 4.76383 3.21506
TGGKGVWR 21.36 17.3721 3.19352
AARAAYVA 16.12 12.6236 3.00614
GKCMRYMG 16.16 12.6606 2.99918
TGCTYAAG 3.14 1.68273 2.88704
TWCNTABC 9.12 6.48996 2.87079
CACVCACR 6.46 4.27785 2.76384
ACCWDGAM 11.32 8.40702 2.68844
CHYAACYD 25.12 20.9552 2.67669
GSWATVBG 16.9 13.4181 2.39543
CGSNGCGK 1.06 0.338309 2.36382
GRRCCTKG 9.54 6.90575 2.34364
TARAAWTS 8.3 5.85303 2.29952
VASTCACB 13.32 10.2261 2.2328
ASMCRMAG 15.76 12.4156 2.20312
WCAMAAYR 21.04 17.2702 2.03492

Parameters

Search parameters Motif filtering Positive sequences Open Contrast sequences Open Statistic parameters Add first run - exclude sequence if motif found
parameters in ini format

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