Task #3663 - 8c6f0a67 Description: Status Start End Updated Duration Sequences Logs Task Bundle finished 2 years ago 2 years ago 2 years ago 22 minutes (1340sec) Positive, Negative Float, Integer, Tomtom Open Results Motif positions Meme Tomtom output Motif Occurrence(%) Expected(%) -log10(Binomial prob) RMAGYRCW 6.73004 0.592398 110.975 YHSHNDGN 54.4487 33.3704 98.7739 WGYRCHDB 16.1217 4.81931 93.3827 NHWSHDKG 37.7947 19.797 90.7525 RNRSWDBY 41.1027 23.7929 75.457 CMBKKBHD 28.8593 14.2972 72.3287 WGSWDVYH 21.5209 9.91308 58.9878 DNNWBCAS 22.5475 11.2059 51.2479 DBWBCMBW 25.9316 13.8011 50.5761 BWGCANHD 12.3194 4.55851 46.9918 ACHDBCTR 5.47529 1.11597 42.7553 HWCADHCW 7.49049 2.12665 40.1534 NCHDKGDN 30.5703 18.704 38.4656 MHWDSTGH 12.4715 5.25744 35.8752 KVRGGHAS 5.89354 1.48895 35.3985 KGCWNWGH 7.3384 2.32874 32.4425 YNCCHKTY 7.22433 2.3036 31.5081 ADHDGVAA 5.77947 1.57352 30.8224 DGWNWNCM 15.8935 8.01772 30.2224 BHYYASAS 7.8327 2.83368 27.3065 RGTDGWHY 6.27376 2.02423 25.5162 KGHYBBTG 8.21293 3.20933 24.4386 MWKGYMMM 6.95817 2.45819 24.4292 YHTASAVK 5.47529 1.6674 23.6256 CANHSNAC 5.1711 1.52891 23.0516 BMWCHGMM 6.76806 2.50235 21.1889 WGGBMCNB 7.56654 2.99042 21.1342 MHARNGSA 5.13308 1.68442 18.5202 ANSDCASN 7.79468 3.30157 18.2786 CWWCMHKY 5.62738 1.98522 18.0369 DCWKDGCH 6.31179 2.40639 17.7069 STGBCHTN 5.39924 1.89295 17.1911 GKVAMSMD 6.69202 2.67293 17.0947 DAHTVCHT 5.58935 2.00879 17.0698 KBRGKCYS 5.93156 2.23047 16.6826 BHHWVMTG 13.6882 7.667 16.0562 DCCHKTYN 7.79468 3.45597 15.8782 CKGDGMHB 5.89354 2.33957 14.2128 GWSNBTGR 6.08365 2.48861 13.6817 CMSTDNYC 5.01901 1.91737 12.1459 TGKBWDAV 6.65399 2.9646 11.9741 SCTNCHWY 5.24715 2.09032 11.5311 VTGDKKYY 8.70722 4.41537 11.4977 AVRGVHAK 5.20913 2.08121 11.2757 ADSYWKKG 5.81749 2.50953 10.5712 GDVWKVCA 5.32319 2.20969 10.2998 DGTGWNTB 5.55133 2.35823 10.25 DGYMTDST 5.05703 2.06729 9.87337 NDRSTRGA 5.28517 2.21184 9.86671 BAMARHRS 5.6654 2.4852 9.42576 AWCMDRVW 5.96958 2.68973 9.36581 SRVBCTCH 5.01901 2.08025 9.2528 RNDCTSAK 5.13308 2.19867 8.51575 YYRBACWV 6.12167 2.88836 8.03212 HCTSARNH 6.19772 2.95594 7.82704 RGMAMNKR 5.28517 2.40751 6.88943 RDSCHCYW 5.70342 2.74954 6.10693 CHTBTDGH 5.01901 2.28588 6.09999 HHTGGYHM 5.51331 2.66213 5.55143 RDSNCTKT 5.47529 2.65505 5.30888 TDRMHDTC 5.51331 2.76686 4.26817 NCMSTHMM 6.38783 3.39691 4.22943 DKWTTSHT 5.36122 2.67727 4.06243 GKSMMDSM 6.42586 3.49636 3.49214 HWGDRSMA 5.51331 2.86221 3.17906 KGKWGKRD 5.47529 2.85109 3.00098 CWDSMASH 5.01901 2.53763 2.86987 VNAKGYTK 5.1711 2.65248 2.78981 Parameters Search parameters Complementary Statistical test type(score) Use Bonferroni correction for binomial score Skip motifs shifted by 1 symbol Motif filtering Minimum motif score Maximum number of results Positive sequences Sequences set Open Maximum motif presence by chance(%) Minimum motif presence in sequences set(%) Contrast sequences Contrast sequences set set Open Maximum motif score in the contrast set of sequences Statistic parameters Using of real frequencies Markov state length Add first run - exclude sequence if motif found Minimum percentage of remaining sequences. 0 - disable run parameters in ini format 0 Complementarity. 0 - forward strand. 1 - forward + reverse strand. 2 Minimum motif score 35 Maximum presence of motif for random reasons in the positive set of sequences [0-100] 5 Minimum presence of motif in the positive set of sequences [0-100] pos.fst File with positive set of sequences 1 0 - neutral frequencies, 1 - real nucleotide frequencies in the set of sequences [0, 1] 1 Score type: 0 - chi-squared or 1 - binomial [0, 1] 0 Maximum number of result motifs. 0 - reveal all significant motifs [0, ] 0 Markov chain order (0-Bernulli, 1-dinucleotide, 2-trinucleotide), when using real nucleotide frequencies [0-3] 0 Unsupported param 0 Minimum % of remaining sequences. First run - exclude sequences if motif found. 0 - disable. [0, 100] neg.fst File with the contrast set of sequences 10 Maximum score in the contrast set of sequences 0 Unsupported param 1 Output results with Bonferroni correction [0, 1] a.txt Results file 1 Write integer results. 0 - real values, 1 - integer [0, 1] 1 Skip motifs that coincide with the previous ones with a shift [0, 1] Delete