Task #645 - 1671611b Description: Status Start End Updated Duration Sequences Logs Task Bundle finished 1 year, 10 months ago 1 year, 10 months ago 1 year, 10 months ago 7 minutes (421sec) Positive, Negative Float, Integer, Open Results Motif positions Motif Occurrence(%) Expected(%) -log10(Binomial prob) TAGANTTG 60.54 1.46624 8216.11 AANTCTAN 61.8 5.73774 4882.87 AGANTTGN 61.73 5.73774 4872.91 ANTCTANN 67.32 21.057 2148.23 GANTTGNN 67.24 21.057 2141.13 DTCTADND 49.93 32.9098 269.421 TCTAHVHN 49.63 32.9098 260.25 ABTTGNHH 48.6 32.9098 229.954 NTCTACNN 31.99 21.057 142.399 TCTANTNN 31.78 21.057 137.263 Parameters Search parameters Complementary Statistical test type(score) Use Bonferroni correction for binomial score Skip motifs shifted by 1 symbol Motif filtering Minimum motif score Maximum number of results Positive sequences Sequences set Open Maximum motif presence by chance(%) Minimum motif presence in sequences set(%) Contrast sequences Contrast sequences set set Open Maximum motif score in the contrast set of sequences Statistic parameters Using of real frequencies Markov state length Add first run - exclude sequence if motif found Minimum percentage of remaining sequences. 0 - disable run parameters in ini format 1 Complementarity. 0 - forward strand. 1 - forward + reverse strand. 8 Minimum motif score 35 Maximum presence of motif for random reasons in the positive set of sequences [0-100] 5 Minimum presence of motif in the positive set of sequences [0-100] pos.fst File with positive set of sequences 0 0 - neutral frequencies, 1 - real nucleotide frequencies in the set of sequences [0, 1] 1 Score type: 0 - chi-squared or 1 - binomial [0, 1] 10 Maximum number of result motifs. 0 - reveal all significant motifs [0, ] 0 Markov chain order (0-Bernulli, 1-dinucleotide, 2-trinucleotide), when using real nucleotide frequencies [0-3] 0 Unsupported param 0 Minimum % of remaining sequences. First run - exclude sequences if motif found. 0 - disable. [0, 100] neg.fst File with the contrast set of sequences 10 Maximum score in the contrast set of sequences 0 Unsupported param 0 Output results with Bonferroni correction [0, 1] a.txt Results file 1 Write integer results. 0 - real values, 1 - integer [0, 1] 0 Skip motifs that coincide with the previous ones with a shift [0, 1] Delete