Motif finder

Task #3630 - 7632d027

Status Start End Updated Duration Sequences Logs Task Bundle
finished a month ago a month ago a month ago 15 minutes (948sec) Positive, Negative Float, Integer, Tomtom Open

Results

Motif Occurrence(%) Expected(%) -log10(Binomial prob)
HMHNVMAS 50.5125 25.2763 171.373
DNRCAVYN 42.3825 19.9338 152.101
RGMASYDN 23.4712 7.32577 148.002
DMAVCAHD 19.4062 5.42171 137.797
CAVMNNGN 30.6469 12.554 130.74
CWRHACWN 14.4928 3.54924 116.153
RMAVKBNM 37.2216 19.4751 96.3776
AHCANDNH 31.4599 15.0922 95.7533
ANDGMASY 13.1849 3.60345 90.5912
MCHSHRRR 21.315 9.35412 71.0022
WGSWRRYH 20.0071 8.54545 69.622
WGKKCMNV 18.4164 8.2057 56.8048
KNHAACMD 13.9272 5.28156 56.7675
STSYARAV 7.63521 1.92292 53.28
CARHCTMV 5.97384 1.2522 50.0738
CWCARWMN 7.95334 2.2105 48.687
ACWDCCTN 5.12549 0.953286 47.7344
WVAVVTRG 11.8416 4.57271 44.6537
RRNAASTG 5.83245 1.3419 43.3746
ARNCYACY 5.23153 1.09826 42.594
RHYYACHR 12.69 5.46604 38.0639
MAMCAWHN 8.8017 3.10186 36.85
KKVMCADN 20.5373 11.1854 36.7296
SYAMARRV 8.8017 3.14546 35.8419
WGAADGSV 5.54966 1.43423 34.7222
ARMTSASW 5.16083 1.26626 34.1413
CMARNRYN 16.649 8.66018 31.9792
WGYARWVM 9.6854 3.89272 31.469
RRGGGMMB 5.97384 1.8416 28.6241
MCMWRGRR 6.46872 2.1892 26.635
DCARAMYV 6.71615 2.38078 25.4487
RDSAVCAM 6.36267 2.22669 24.2797
MAGNMAYV 7.8473 3.22515 22.2519
KGADVMCH 9.08448 4.06989 21.5862
CWGVTVAV 6.00919 2.16882 20.9052
ARRCBCWK 5.40827 1.83863 20.5409
WGHGGRMM 5.47897 1.92462 19.4527
SRSAVSCV 9.22587 4.31883 19.2458
RHAGTAKD 5.05479 1.77913 17.162
AARGVSMH 6.04454 2.38061 16.9283
TVCASYMN 7.98869 3.67014 16.3915
GMAHHCAB 5.12549 1.86752 16.0959
CAMKSWSV 7.49381 3.36369 16.0043
MATHCABB 5.58501 2.16124 15.7035
MBVACASV 7.21103 3.22533 15.2244
TAVARRGN 5.23153 1.99249 14.7831
RWYATCMH 5.30223 2.04385 14.6088
DMCCAKRB 6.15058 2.5861 14.3629
AKNBAGGR 5.30223 2.07612 13.9676
CWKCANCN 5.65571 2.30906 13.7084
AKVCAMRD 5.7971 2.48921 12.1239
ANAAAKBH 6.22128 2.77018 12.061
RMATBNCM 7.28172 3.59496 10.5834
GHRGARMB 6.04454 2.7649 10.3227
DRWCHGAR 5.8678 2.83886 7.53422
DBCARANG 5.65571 2.69534 7.50217
GVMVMTCM 5.30223 2.46063 7.42404
YMNAGGAN 5.30223 2.46304 7.38853
GGWNRMMC 5.05479 2.32566 6.95969
AGSRNYYC 5.23153 2.45963 6.74428
KMASMRGK 5.30223 2.52868 6.44892
STRRGMMV 6.8929 3.68254 6.12075
DSCMTVRG 5.72641 2.88912 5.58301
AYRDVMAA 5.09014 2.45126 5.50667
WGYCMMDM 6.43337 3.46366 4.81222
DACYSARH 5.09014 2.58079 3.81526
YAGSRNAV 6.36267 3.50837 3.7687
AYHVWRCA 5.09014 2.59054 3.6945
CMYASMDR 5.7971 3.13832 3.26096
GRGRSBGV 5.47897 2.93057 2.98557
RBYCCYRR 6.22128 3.56285 2.15168
RRVTRGAD 5.69106 3.16797 2.11746

Parameters

Search parameters Motif filtering Positive sequences Open Contrast sequences Open Statistic parameters Add first run - exclude sequence if motif found
parameters in ini format

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