Motif finder

Task #103 - cd9cf65e

Status Start End Updated Duration Sequences Logs Task Bundle
finished 6 months ago 6 months ago 6 months ago 6 minutes (380sec) Positive, Negative Float, Integer, Open

Results

Motif Occurrence(%) Expected(%) -log10(Binomial prob)
GGGMGGDG 60.1307 3.47238 91.6861
GRGGSRGG 62.0915 4.6029 85.269
GGMGGRGM 55.5556 4.6029 70.5589
RGRGSHGG 74.5098 13.1844 66.0977
CCCHSCCB 63.3987 10.0605 56.8288
GSDGGGVG 62.7451 10.0605 55.6457
GGSBGGGN 66.0131 13.1844 50.6106
CCDCCCRS 50.3268 6.82448 47.2125
DGGGMRGR 62.0915 13.1844 44.1969
GMRGRGRV 78.4314 24.6343 43.4896
RGSKGGHG 60.7843 13.1844 42.1555
CCYCYBCN 76.4706 24.6343 40.4329
GMGGVGCB 52.9412 10.0605 39.3065
KCCHKCYB 83.6601 34.5776 35.0688
GRRGSCDS 72.549 24.6343 34.7327
GSGCSNGG 45.7516 8.99446 31.9381
CDGGGVRS 62.7451 19.1112 31.4839
GSTGSDGB 62.0915 19.1112 30.6365
DGMSMRGG 68.6275 24.6343 29.5402
GGVRRGMV 79.7386 34.5776 29.525
CYBCYKGS 67.9739 24.6343 28.7213
STGGRGSN 57.5163 17.1818 28.447
MRGRRGMR 75.1634 31.4178 27.8608
GCHKCYCY 50.3268 13.1844 27.4877
CRSGCNGG 41.8301 8.99446 26.5444
GRGMDGSK 66.0131 24.6343 26.3412
GGCKSYKG 39.8693 8.99446 24.0026
CDSMSCCD 75.1634 34.5776 23.8413
GCSCDGVS 56.2092 19.1112 23.5379
KGGMVMGM 63.3987 24.6343 23.3423
CDCCCWBK 55.5556 19.1112 22.8068
SCHGCCRS 45.098 13.1844 21.2382
GCGCSYGC 20.915 2.32849 20.4781
WGRAGSHS 60.1307 24.6343 19.8646
WSNCCCCN 67.3203 31.4178 19.0497
KCWCCYKS 49.0196 17.1818 18.799
GSCRCSCS 35.2941 8.99446 18.484
SRCCHGGS 42.4837 13.1844 18.3842
GGSWGHVS 69.9346 34.5776 18.2427
CCYNBCTK 58.1699 24.6343 17.9186
RSTKSSKG 66.0131 31.4178 17.7664
TKSKGNGS 64.7059 31.4178 16.533
KCCCYDSB 67.9739 34.5776 16.3676
SASCCCDV 49.0196 19.1112 16.1149
TKGSWGGN 45.7516 17.1818 15.5933
GSRCCGCS 23.5294 4.6029 15.3207
ASCCDSVR 66.6667 34.5776 15.1818
DGGGMGHK 47.7124 19.1112 14.9108
RGAGSCCN 32.0261 8.99446 14.9075
CYBYGCWS 54.902 24.6343 14.9044
CGCGGGCG 10.4575 0.587263 14.7463
GGSHKCTS 38.5621 13.1844 14.4474
DGRRGAAR 37.9085 13.1844 13.832
KKYCCWGM 43.7908 17.1818 13.8046
GSTSWGGV 37.2549 13.1844 13.2285
CWBCTBTB 55.5556 27.2532 12.7774
CCWBCTKB 45.098 19.1112 12.6367
YYCCAGBV 45.098 19.1112 12.6367
CNGSCGCK 29.4118 8.99446 12.2758
AKCYYTSS 41.8301 17.1818 12.1177
CYYGSDGV 62.7451 34.5776 11.9218
GCSCWCRS 28.7582 8.99446 11.6509
MGGCSMGS 28.7582 8.99446 11.6509
CYKTCCHS 35.2941 13.1844 11.4895
TSNGCBYC 50.3268 24.6343 11.1569
MMRGAGGV 34.6405 13.1844 10.934
CCAATSRG 14.3791 2.32849 10.8782
TGSARGGM 19.6078 4.6029 10.7406
GGVCNSAS 49.6732 24.6343 10.6661
CYYCWCRS 39.8693 17.1818 10.5335
GRCYHSCV 60.7843 34.5776 10.4537
RVAGMMAR 49.0196 24.6343 10.1863
KGVTTKGS 33.3333 13.1844 9.85969
WCCHKSRC 48.366 24.6343 9.71767
RCCVCCTS 22.8758 6.82448 9.69467
MSAGGCTB 22.8758 6.82448 9.69467
YCTGWGNS 38.5621 17.1818 9.53495
SGWGCGCS 18.3007 4.6029 9.34965
GGRGWYNS 55.5556 31.4178 9.22764
SAMAGRSN 55.5556 31.4178 9.22764
CCCTTBVB 34.6405 14.7055 9.16553
AGYCAVSC 22.2222 6.82448 9.08595
GRGCSCCD 22.2222 6.82448 9.08595
GBKGSYAG 32.0261 13.1844 8.8351
AGCCYRSY 25.4902 8.99446 8.73227
WGKCMCWG 25.4902 8.99446 8.73227
ACHGCSSC 21.5686 6.82448 8.4931
GAGARAGR 12.4183 2.32849 8.40411
GCGCGCWS 12.4183 2.32849 8.40411
AAAADVAA 18.3007 5.1632 8.25811
WSCRCSCG 24.8366 8.99446 8.19111
TKTGSVDG 39.2157 19.1112 8.17964
GRASTGGS 16.9935 4.6029 8.03212

Parameters

Positive sequences Open Contrast sequences Open Statistic parameters Add first run - exclude sequence if motif found
parameters in ini format

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