Motif finder

Task #3654 - 184a11a2

Status Start End Updated Duration Sequences Logs Task Bundle
finished 5 months ago 5 months ago 5 months ago 10 minutes (638sec) Positive, Negative Float, Integer, Tomtom Open

Results

Motif Occurrence(%) Expected(%) -log10(Binomial prob)
TRTTKAYH 56.16 22.9067 548.678
TAAMCANN 46.1 24.5868 228.502
TTRNGHAA 37.22 17.8556 219.488
GTWTAYNN 44.92 24.1785 214.267
TGNMCTYK 46.12 26.2679 189.038
GNMCTYKG 41.78 23.5477 168.068
RASKWCAD 48.22 29.479 160.215
ATYGATYN 14.96 4.80516 152.871
ATTDCNYA 26.26 13.5033 116.005
AGKTCANN 40.16 24.8555 114.72
GGDCRDNG 42.84 27.4992 109.537
TGTAGTYY 10.38 3.15949 109.491
AAAAMAAA 13.46 5.01146 105.919
GGGGHGGG 7.16 1.74981 97.0209
TDCHYAAY 32.04 19.4192 89.1929
TACAWYTC 7.82 2.26443 85.4435
RMCTTTGN 27.4 15.9747 82.7927
CBCCWCCS 12.22 4.8857 82.4643
ACTACRWY 8.06 2.48831 80.3663
GGRGGHGG 10.1 3.78629 74.8164
AAACAARH 23.52 13.3931 73.2485
TTGWTTTB 20.1 10.8073 72.0939
GGGARWTG 9.76 3.73148 69.1736
RWBCRAHG 32.46 21.1283 67.3458
ACYWTGNM 29.22 18.4354 66.4242
TTWAYYTW 19.82 10.876 66.3062
TTKCRWCA 12.96 6.04405 62.279
ARWTGTAG 7.5 2.57543 61.983
TGAMMTHM 25.84 16.4099 54.1263
ACAWYTCC 9.26 3.9582 51.0888
SGYGGGGS 6.84 2.48912 49.8609
TAWMTAWB 14.76 7.94064 48.3288
TCRATANH 15.2 8.3808 46.1661
ARCRAAYA 15.86 8.92137 45.454
GTAGTYCB 6.38 2.35652 44.4791
RAGKSCAN 35.3 25.4478 43.8091
CGMDKSCG 4.94 1.55973 43.5598
CKTGGMHB 26.36 17.7262 41.9363
AGKRCAVM 31.4 22.2396 40.5631
GTGWMCTH 14.6 8.26195 39.8104
CCKTBGVN 36.1 26.5515 39.6592
TRHGYAAS 18.72 11.7358 36.378
TDWCBYAK 38.18 28.8034 36.1405
TTGCNTCA 7.54 3.3931 34.6648
ATTKCRWC 7.2 3.21318 33.3898
TTWKCTHW 27.7 19.6402 32.948
RYBCTRRG 35.94 27.1078 32.4842
GWNCBYAG 28.96 20.8266 32.158
RTACAHAS 12.24 6.90793 31.6654
ATTWACYH 11.1 6.11061 30.4843
CGCNCCSS 4.78 1.78014 30.3649
TNCTRRGW 30.92 22.7711 30.166
RTGMAATH 12.84 7.46184 30.0299
CGGNGCGB 3.24 0.949847 29.1209
AHGCAHRC 12.96 7.68535 27.8693
KCWMKGYS 37.32 28.8966 27.7088
TKCRTCAY 7.06 3.3523 27.2202
WRCSAMGH 19.1 12.7486 26.9146
AAAWAAAT 6.98 3.31886 26.687
DDCTYAGH 35.02 26.8903 26.5644
TTTDGHAA 18.52 12.4073 25.1062
VGCGKCGB 3.84 1.37896 24.5678
CWCYGWRB 34.22 26.3791 24.5329
ACAANTCC 7.52 3.78711 24.5244
RYCWMYGM 29.46 22.1213 23.6777
TGBKTAYG 7.96 4.14651 23.5598
YSWCCCYD 35.86 28.0557 23.1932
TNGCTHWG 20.36 14.1929 22.5378
CDGYGDCS 18.24 12.3848 22.5352
GRGDYRGR 31.98 24.6047 22.009
CTVMCYCN 34.72 27.1405 21.9699
TYCKRWYY 36.14 28.5066 21.6175
WACVAAHY 26.6 19.7739 21.5488
CTTCCKGB 9.96 5.75465 21.3641
RTTCMWGG 12.04 7.38327 21.2933
ARTTCYHR 22.06 15.7883 21.2359
RATYGATH 6.34 3.13511 20.4679
TTWACYVD 24.62 18.1422 20.2674
TMACCKTK 6.74 3.42843 20.2168
TSSMTKCB 29.84 22.8774 19.998
GCSAMGNV 20.72 14.7442 19.9627
GCGCABGC 2.04 0.518623 19.7523
CSTCYRCS 8.28 4.59986 19.2877
TTSGYWDB 36.6 29.2688 18.9833
CMGGAAGB 9.54 5.57991 18.894
BTCRGTGN 16.88 11.6024 18.2785
WTRTWTGY 19.36 13.8255 17.2707
GTWGWYTY 15.5 10.5412 17.0842
TKTTTTTC 7.78 4.34948 17.0327
CAYCMCCV 8.9 5.20857 16.9003
CGYKMGSS 6.06 3.12628 16.2845
WWCSSAGV 22.84 17.0304 15.8944
GWGGGNGG 8.8 5.20186 15.762
ACBTWGNT 16.06 11.1535 15.541
CGMYGSGR 4.32 1.96558 15.2599
TGCAATNN 15.64 10.8274 15.204
THGWTCTH 12.66 8.34519 15.0528
HMTTAACB 7.76 4.4581 14.8692
AAHBATTA 8.94 5.38306 14.6325
GCGHDCGR 2.56 0.895427 14.4126
AWVTHCYA 26.24 20.272 14.3567
ATNATTAA 3.98 1.77528 14.3245
ARCCBTKG 13.34 8.9839 14.1566
GSCSCCGS 4.0 1.82739 13.2723
RCDCAMYS 26.68 20.89 12.6509
TCYWNCSW 34.2 27.9203 12.3456
WBCSTRGM 27.56 21.7402 12.3253
TGTYTTCH 13.76 9.50137 12.3032
TGBMCTHM 28.82 22.9103 12.2612
ACAYMCAC 6.94 3.99529 12.1558
TDCCWAMG 8.58 5.26973 12.1088
CASNATGB 20.34 15.2436 12.041
CYRTCYCB 15.4 10.9273 12.0075
AGRCNKDG 35.04 28.7709 11.9549
ARWCCAAA 7.34 4.32953 11.6969
TCRACADN 18.88 13.9946 11.6611
ACRGWGHD 29.96 24.06 11.5915
AHTCSCAG 7.04 4.10756 11.5602
WCCCMNCC 13.52 9.3804 11.4201
AWDAATBA 16.44 11.8905 11.3708
ACTACAAR 3.58 1.62391 11.2607
AAAMMAAG 11.1 7.37421 11.2172
WWTRKTTG 20.58 15.5562 11.1996
ATTDCWAA 8.7 5.43776 11.0729
HCACCAYS 8.3 5.12247 11.0432
TRHCCTGN 26.24 20.7856 10.4167
ANCKAWTK 13.02 9.08937 10.0185
CDGCSTKS 18.34 13.7151 9.93574
GCSGBYCG 2.52 0.994226 9.84342
YSAHTTCS 13.32 9.36269 9.83006
ANRAAAAC 14.48 10.3856 9.54335
AGATAMGV 3.5 1.63771 9.508
WNATTAAC 5.82 3.30488 9.48348
GWTCKTKS 10.02 6.6296 9.48213
GCVBMGGG 10.84 7.33238 9.19621
GTTGACAN 6.12 3.55016 9.1795
TWGACWTW 7.46 4.59246 9.13512
WRVTRACS 20.84 16.0769 8.88009
GCGHKGCG 1.56 0.470183 8.87486
WSSRTTKC 18.5 13.9846 8.86343
AACARRAA 13.08 9.29051 8.49592
AMTGAAWR 10.18 6.85332 8.40794
CTTAWCBN 9.48 6.28915 8.24611
VTMACCWB 23.0 18.165 7.91884
GRTKAAMG 5.04 2.8176 7.7815
CCAGVRTS 14.62 10.7072 7.67745
GCGCBYGC 2.84 1.27897 7.37961
AAHGTYCT 8.62 5.65788 7.36324
CTCVCBGS 11.78 8.29677 7.34656
AGKVYAKG 19.86 15.3969 7.32985
CHCKKSGD 31.3 25.9805 7.21814
AGRSGGCG 2.32 0.953195 7.1338
KCCCKMCS 7.94 5.12403 7.13104
YACNCACB 14.32 10.5101 7.10307
GGHWGGRG 12.84 9.23035 7.08623
GACMTTYM 8.78 5.81321 7.06948
CSVCGAVG 3.48 1.7308 6.95297
TGWTSTYK 21.96 17.3569 6.92039
GAWGCVAS 9.56 6.47303 6.88701
WCCMCCAC 3.96 2.08298 6.69794
TTGATTVD 8.32 5.47068 6.66123
CVCTTCCB 8.7 5.78326 6.64653
GRVCTAYG 4.72 2.65574 6.42036
CGGYHCSG 2.18 0.888985 6.39694
WBCKTATC 4.48 2.48232 6.3273
KGCGKSCG 2.0 0.781779 6.28307
RTRRCTCR 8.96 6.0568 5.97003
CCCDCCSK 6.9 4.3807 5.92276
GWCGVDCG 1.88 0.723529 5.78611
RGTRACBM 12.16 8.78735 5.75168
TRSTTYVK 32.02 26.9303 5.63604
CAGKDCAV 25.16 20.5057 5.55737
ACTSBGTW 10.86 7.6951 5.54608
TCRKWGYY 19.52 15.3385 5.51123
GCSTSGSY 9.3 6.39097 5.41177
TTWAYYWC 13.34 9.87623 5.173
TARAAWWA 9.44 6.53666 5.11211
GSCTBCKG 13.42 9.96116 5.04496
RRGCSYCG 4.8 2.79845 5.03317
AARTATWK 8.7 5.93741 4.90121
GCTYAGSN 11.4 8.23078 4.84738
ATCGATRN 1.84 0.729321 4.74944
AGCGMNCG 1.5 0.52807 4.74675
THGMAATS 9.4 6.54625 4.66395
CCMMGTGD 11.16 8.0504 4.60696
CCARCCYB 13.86 10.4014 4.59277
AGAAMRAA 8.72 5.98467 4.57105
AMGGTCKH 4.8 2.85384 4.15701
TKTAAYYH 18.44 14.5724 4.02777
CTCGSBCS 3.5 1.90138 3.72404
CVCSCTCS 5.4 3.35321 3.6943
AYTYGTAG 3.02 1.56441 3.53045
WAMYGAAW 10.04 7.20666 3.51919
ATCAATYH 4.82 2.91746 3.42879
TVTKYGTM 18.04 14.3211 3.27165
TGTGBGTG 6.44 4.22261 3.22821
TGWACCHW 9.78 7.01707 3.21182
RKCTNAGG 12.58 9.452 3.16431
AAGVVAAA 16.22 12.7056 3.06226
ASGAAWTS 6.62 4.38337 3.06066
TWTACRNA 10.5 7.65523 3.03522
GCAHDCAS 17.16 13.5594 3.0272
TAWMTASN 12.2 9.14506 2.94874
GGGAYWYG 5.74 3.68329 2.90134
GGVAKCSG 4.58 2.76818 2.87772
GGSCTSSG 5.8 3.75172 2.64637
ATKTHGMA 10.3 7.54303 2.50154
AKATGGCG 1.22 0.424122 2.4807
TGCCYCRB 9.8 7.11444 2.4773
DCGRMCGV 3.24 1.78053 2.42019
TCSRSGKC 6.36 4.2404 2.24698
WCCTCVCC 5.36 3.43283 2.20456
ACDCAKHC 13.56 10.4473 2.17565

Parameters

Search parameters Motif filtering Positive sequences Open Contrast sequences Open Statistic parameters Add first run - exclude sequence if motif found
parameters in ini format

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