Task #102 - 5d7da07c Description: Status Start End Updated Duration Sequences Logs Task Bundle finished 1 year, 10 months ago 1 year, 10 months ago 1 year, 10 months ago 14 minutes (861sec) Positive, Negative Float, Integer, Open Results Motif positions Motif Occurrence(%) Expected(%) Chi2 GGGCGGGG 30.0654 0.587263 2263.9 GGGGCGGG 28.7582 0.587263 2067.57 GGCGGGGC 22.2222 0.587263 1219.47 RGGGGCGG 29.4118 1.17109 1041.97 GGGDGGGG 34.6405 1.75149 944.901 GGGMGGAG 26.7974 1.17109 857.975 GGMGGRGG 34.6405 2.32849 686.034 GMGGGGMG 33.9869 2.32849 658.561 TCCCCKCC 22.8758 1.17109 615.477 GGGSWGGG 32.0261 2.32849 579.51 AGGSVGGG 39.2157 3.47238 562.93 GMGGGVGG 39.2157 3.47238 562.93 GGVGGGHG 45.7516 5.1632 488.177 GMGGMGGG 29.4118 2.32849 481.969 GGGCGGGH 24.8366 1.75149 465.531 GCGGSGSC 28.1046 2.32849 436.567 CCCBCCCR 34.6405 3.47238 428.042 GGMGGVGC 33.9869 3.47238 410.278 CKGGGMRG 38.5621 4.6029 383.331 CGCCCSCK 26.1438 2.32849 372.674 GGWGGBGG 32.0261 3.47238 359.245 GSGCGCGG 17.6471 1.17109 354.654 GGGGSWGG 24.8366 2.32849 332.886 TCCKCCCH 30.719 3.47238 327.106 AGGAGGVR 29.4118 3.47238 296.472 GDGGVGGC 35.9477 5.1632 280.826 GCGCGGSS 22.2222 2.32849 260.045 GCKCCHGS 39.8693 6.82448 244.809 GCGGAGCB 18.3007 1.75149 239.241 WGRGSAGG 31.3725 4.6029 238.202 GGCKGCGG 14.3791 1.17109 227.917 CGCCKCCS 20.915 2.32849 226.994 ACCCCVCC 17.6471 1.75149 220.717 GGCHGGGV 32.0261 5.1632 213.835 SGCGCGGS 20.2614 2.32849 211.31 GRRGSCWG 43.7908 8.99446 205.961 GMWGGRRG 42.4837 8.99446 190.777 TCCYCCTC 13.0719 1.17109 185.036 GGGSSYGC 28.1046 4.6029 183.594 GSSTGGMG 28.1046 4.6029 183.594 CWGSGGSS 41.8301 8.99446 183.403 GGAGMVGS 35.2941 6.82448 181.713 GGRGARAG 18.9542 2.32849 181.627 GGSMGAGG 18.9542 2.32849 181.627 CCWSCCDS 52.2876 13.1844 177.443 MGMGGSGS 41.1765 8.99446 176.174 GGGWGGSM 27.451 4.6029 173.524 RGAAGGRG 18.3007 2.32849 167.627 CRCCCRGV 33.3333 6.82448 157.545 TGGHGGGS 22.2222 3.47238 154.903 GGCGGSYC 17.6471 2.32849 154.189 GVSMAGGR 49.0196 13.1844 149.023 CKGGWGSS 38.5621 8.99446 148.713 AGGSVVAG 41.1765 10.0605 147.245 RAGRGGCS 25.4902 4.6029 145.019 CGSGCGCB 21.5686 3.47238 144.292 GCWGVGSC 32.0261 6.82448 142.39 CTSCYKGS 37.9085 8.99446 142.211 TCCMCMCC 16.9935 2.32849 141.312 MGGCKGGS 24.8366 4.6029 136.085 GSVGGGAM 31.3725 6.82448 135.1 RGGCKSCK 36.6013 8.99446 129.643 CCMGSRGS 36.6013 8.99446 129.643 AGCCCSGC 11.1111 1.17109 129.086 GCGSAGGC 11.1111 1.17109 129.086 GSGCCGGG 11.1111 1.17109 129.086 CCCGCCTK 11.1111 1.17109 129.086 RGTGGGMG 16.3399 2.32849 128.997 SCCCTBKS 46.4052 13.1844 128.072 TGGRGCNS 35.9477 8.99446 123.577 GGGVVAGM 38.5621 10.0605 123.541 CAGRGNAG 23.5294 4.6029 119.07 CNGGGCTS 23.5294 4.6029 119.07 WGGGSGYK 35.2941 8.99446 117.657 CCASCCCD 19.6078 3.47238 114.717 GCRCSCKC 22.8758 4.6029 110.988 GNGGCGCK 22.8758 4.6029 110.988 CSAGSGCS 22.8758 4.6029 110.988 AGMSMGGR 33.9869 8.99446 106.251 GMGMGGAG 15.0327 2.32849 106.05 RGRCCAGG 15.0327 2.32849 106.05 AGAGGSHG 18.9542 3.47238 105.612 GTGSGSGK 22.2222 4.6029 103.19 GGGASYSG 22.2222 4.6029 103.19 GVHGAGGR 35.9477 10.0605 101.917 CBCYGGGB 35.9477 10.0605 101.917 WWGGGVGG 28.1046 6.82448 101.524 CAGSGCSV 28.1046 6.82448 101.524 TGSCCNSC 33.3333 8.99446 100.767 YTCCWGCN 33.3333 8.99446 100.767 TCCCBSCD 35.2941 10.0605 96.8352 TTCTCYYY 21.5686 4.6029 95.6764 CMGCCWGK 21.5686 4.6029 95.6764 GCYSYCCK 32.6797 8.99446 95.4275 CTCYSCMR 32.6797 8.99446 95.4275 CCAATSRG 14.3791 2.32849 95.4187 SCTCCRCV 27.451 6.82448 95.3834 SSCAGGCV 27.451 6.82448 95.3834 GRGVAGCN 41.8301 13.1844 95.2252 GCCYCTTB 17.6471 3.47238 88.5301 DGGSAAGG 17.6471 3.47238 88.5301 GSCKSCTG 20.915 4.6029 88.4466 TCTCYTYC 13.7255 2.32849 85.3489 GGMGCCYC 13.7255 2.32849 85.3489 GGDRGAAR 26.1438 6.82448 83.6768 WGGGTGGG 9.15033 1.17109 83.1814 GAGAGAGR 9.15033 1.17109 83.1814 GTGGGGYG 9.15033 1.17109 83.1814 CYYTBCTS 39.8693 13.1844 82.6351 GCGCTSSS 20.2614 4.6029 81.5009 GSRGCCCK 20.2614 4.6029 81.5009 RGGHGGTG 16.9935 3.47238 80.5541 RWGSWGGG 30.719 8.99446 80.2816 GCCTKSCH 25.4902 6.82448 78.1108 DSGCCCCK 25.4902 6.82448 78.1108 TSCGCGCS 13.0719 2.32849 75.8404 CKGAGRGG 13.0719 2.32849 75.8404 GGMCAGMS 19.6078 4.6029 74.8391 TYTCYCYD 38.5621 13.1844 74.7375 ATTGGCTG 5.88235 0.587263 73.0476 RGCTCHGG 16.3399 3.47238 72.9545 GYGSSCAG 18.9542 4.6029 68.4613 MGGCGCKS 18.9542 4.6029 68.4613 SCTCWGGS 18.9542 4.6029 68.4613 WGVAGARG 24.183 6.82448 67.5534 CCWKCTTB 24.183 6.82448 67.5534 CYTGGRGV 24.183 6.82448 67.5534 TGMGGGKG 12.4183 2.32849 66.8933 TCCASCYN 28.7582 8.99446 66.4436 WGCYMSAG 28.7582 8.99446 66.4436 KMGGGSTS 28.7582 8.99446 66.4436 GGGTGHGG 10.4575 1.75149 66.2101 ABSCCCTC 15.6863 3.47238 65.7314 ABCCYTSC 23.5294 6.82448 62.5621 GGWGCKVG 23.5294 6.82448 62.5621 CRGAGCYV 23.5294 6.82448 62.5621 RCCAATSR 18.3007 4.6029 62.3675 CGSGCMRG 18.3007 4.6029 62.3675 WRGGWGSC 28.1046 8.99446 62.1217 GGAGGMHC 15.0327 3.47238 58.8848 AAAAWRAA 11.7647 2.32849 58.5076 GGGGYGWG 11.7647 2.32849 58.5076 CCGCSGGS 11.7647 2.32849 58.5076 AGCCAATS 7.84314 1.17109 58.1596 WGCAGGGC 7.84314 1.17109 58.1596 TKKCTGKS 27.451 8.99446 57.945 RBYTGGGG 22.8758 6.82448 57.7622 TCYBCYKS 54.902 24.6343 56.8993 WCWSCBCC 35.2941 13.1844 56.7284 GBGTGSSY 35.2941 13.1844 56.7284 TBCTCCAC 9.80392 1.75149 56.642 RRKCCTGG 17.6471 4.6029 56.5577 AGCCTSBB 28.7582 10.0605 53.1679 GSAVAGCH 28.7582 10.0605 53.1679 GCTTKGCH 14.3791 3.47238 52.4146 TGGHGGCB 18.3007 5.1632 51.144 GAVBCCCC 18.3007 5.1632 51.144 TKGGCTYY 16.9935 4.6029 51.0319 WGRAAGGR 16.9935 4.6029 51.0319 WGCSCAGR 16.9935 4.6029 51.0319 WYYCCAGC 16.9935 4.6029 51.0319 GGCGWGMS 16.9935 4.6029 51.0319 GGSAGCWS 16.9935 4.6029 51.0319 GRASTGGS 16.9935 4.6029 51.0319 AGMRGCCA 11.1111 2.32849 50.6833 TTTGGGRR 11.1111 2.32849 50.6833 GBBCHGAG 36.6013 14.7055 49.8811 WCAGRGDG 21.5686 6.82448 48.7372 GGGTSMHG 21.5686 6.82448 48.7372 ACCGCCSC 7.18954 1.17109 47.3231 TCCCASTC 7.18954 1.17109 47.3231 GGACCYGC 7.18954 1.17109 47.3231 GGGGGTWG 7.18954 1.17109 47.3231 GGCGGTGS 7.18954 1.17109 47.3231 GCAGCARC 7.18954 1.17109 47.3231 CCGGMGGG 7.18954 1.17109 47.3231 AGGTGGVR 13.7255 3.47238 46.3208 GGBTWGGG 13.7255 3.47238 46.3208 RSTKSCTG 25.4902 8.99446 46.2871 TKMCCCCK 16.3399 4.6029 45.7901 GSWAGGGM 16.3399 4.6029 45.7901 WCCHTCTK 20.915 6.82448 44.5121 AGARAGAS 10.4575 2.32849 43.4204 AGGMKGCC 10.4575 2.32849 43.4204 AGSMAGCA 10.4575 2.32849 43.4204 TSCCCTCW 10.4575 2.32849 43.4204 GAGRGAWG 10.4575 2.32849 43.4204 GCGGGMCK 10.4575 2.32849 43.4204 CTCCCAKK 10.4575 2.32849 43.4204 CWAGGGMG 10.4575 2.32849 43.4204 CWCGCNGS 24.8366 8.99446 42.6918 CTSCDMRG 32.0261 13.1844 41.1981 YCTGWGDS 32.0261 13.1844 41.1981 AGRGWAGM 15.6863 4.6029 40.8323 TYCCWGGS 15.6863 4.6029 40.8323 GRGGMCSG 15.6863 4.6029 40.8323 GMRGCCRC 15.6863 4.6029 40.8323 GBCGCCRG 13.0719 3.47238 40.6035 DGCTGAGS 13.0719 3.47238 40.6035 AAGVAGAG 8.49673 1.75149 39.7447 CCCGCCAB 8.49673 1.75149 39.7447 RCCCAGVH 26.1438 10.0605 39.3391 GSTGMARR 24.183 8.99446 39.2418 TGAGAGGS 6.53595 1.17109 37.6028 GTGMGCGC 6.53595 1.17109 37.6028 GWCCTGGG 6.53595 1.17109 37.6028 GGCCGSCG 6.53595 1.17109 37.6028 GCACACAY 6.53595 1.17109 37.6028 CCACCAGS 6.53595 1.17109 37.6028 GDGCTBGC 16.3399 5.1632 37.0167 AGGSCASA 9.80392 2.32849 36.7189 AGCKGCWG 9.80392 2.32849 36.7189 ACASMCAG 9.80392 2.32849 36.7189 ACWCAGAM 9.80392 2.32849 36.7189 WCCCKCGC 9.80392 2.32849 36.7189 GWGACYCC 9.80392 2.32849 36.7189 GGGCKCTY 9.80392 2.32849 36.7189 RTSAGGGG 9.80392 2.32849 36.7189 KGTGKGTG 9.80392 2.32849 36.7189 CTCCAGKR 9.80392 2.32849 36.7189 CCGSGGCK 9.80392 2.32849 36.7189 AGAGCYVS 19.6078 6.82448 36.6363 CKGGAMDG 19.6078 6.82448 36.6363 TSCAGCRS 15.0327 4.6029 36.1585 GGGWRGAM 15.0327 4.6029 36.1585 GSCWGGTS 15.0327 4.6029 36.1585 CCCWSTSG 15.0327 4.6029 36.1585 RGRWCYCM 37.2549 17.1818 35.8798 GCDGAGAS 12.4183 3.47238 35.2626 GSGGTGCD 12.4183 3.47238 35.2626 AHCTSCBC 24.8366 10.0605 33.2043 CCAGDSAB 24.8366 10.0605 33.2043 GGAHGMKG 18.9542 6.82448 32.9858 GSDGWTGG 18.9542 6.82448 32.9858 DAGMCARG 18.9542 6.82448 32.9858 CRGWGHGG 18.9542 6.82448 32.9858 AGBCCABC 15.6863 5.1632 32.8139 GGBGTGGC 7.84314 1.75149 32.4156 GGSAMRAG 14.3791 4.6029 31.7686 GSTCYCTS 14.3791 4.6029 31.7686 RRAAGCAR 14.3791 4.6029 31.7686 CGCNMGGG 14.3791 4.6029 31.7686 CCWGSAAS 14.3791 4.6029 31.7686 AGTCASSC 9.15033 2.32849 30.5787 TKCCCCTY 9.15033 2.32849 30.5787 TCAGRGCY 9.15033 2.32849 30.5787 GGCTGYMG 9.15033 2.32849 30.5787 GGYGGCMG 9.15033 2.32849 30.5787 GRCCAATS 9.15033 2.32849 30.5787 GCWAGARG 9.15033 2.32849 30.5787 Parameters Search parameters Complementary Statistical test type(score) Use Bonferroni correction for binomial score Skip motifs shifted by 1 symbol Motif filtering Minimum motif score Maximum number of results Positive sequences Sequences set Open Maximum motif presence by chance(%) Minimum motif presence in sequences set(%) Contrast sequences Contrast sequences set set Open Maximum motif score in the contrast set of sequences Statistic parameters Using of real frequencies Markov state length Add first run - exclude sequence if motif found Minimum percentage of remaining sequences. 0 - disable run parameters in ini format 1 Complementarity. 0 - forward strand. 1 - forward + reverse strand. 30 Minimum motif score 35 Maximum presence of motif for random reasons in the positive set of sequences [0-100] 5 Minimum presence of motif in the positive set of sequences [0-100] pos.fst File with positive set of sequences 0 0 - neutral frequencies, 1 - real nucleotide frequencies in the set of sequences [0, 1] 0 Score type: 0 - chi-squared or 1 - binomial [0, 1] 0 Maximum number of result motifs. 0 - reveal all significant motifs [0, ] 0 Markov chain order (0-Bernulli, 1-dinucleotide, 2-trinucleotide), when using real nucleotide frequencies [0-3] 0 Unsupported param 0 Minimum % of remaining sequences. First run - exclude sequences if motif found. 0 - disable. [0, 100] neg.fst File with the contrast set of sequences 10 Maximum score in the contrast set of sequences 0 Unsupported param 0 Output results with Bonferroni correction [0, 1] a.txt Results file 1 Write integer results. 0 - real values, 1 - integer [0, 1] 0 Skip motifs that coincide with the previous ones with a shift [0, 1] Delete