Motif finder

Task #3339 - 0939d046

Status Start End Updated Duration Sequences Logs Task Bundle
finished 4 months ago 4 months ago 4 months ago an hour (3798sec) Positive, Negative Float, Integer, Tomtom Open

Results

Motif Occurrence(%) Expected(%) -log10(Binomial prob)
TRTTKACW 39.0697 9.80875 1500.0
GTAAAYAN 32.6206 8.38251 1177.49
GTTKACHY 27.5853 9.79918 631.416
GTCRAYAN 18.5095 6.03039 457.066
TTKAYTTW 23.475 9.95013 385.035
TMAAYAHG 19.8185 8.35903 320.415
TTTGYTTW 17.9073 7.30681 304.704
AAYMAAYA 21.0228 9.65303 287.496
TGAMCTYD 18.492 8.4679 250.314
AARCAARC 14.3555 5.79616 243.906
TRTYKAYC 16.066 7.11585 229.893
GGGHGGGG 7.60974 2.06962 227.063
RAGKTCAV 18.5793 9.00309 221.32
KNACTTWG 19.5654 9.74003 219.861
GGGGHGGG 7.4352 2.06962 215.348
ATTKAYHT 17.6892 8.61865 206.509
GRGGSHGG 18.3524 9.73508 173.392
TAMWTADY 18.4135 9.84288 170.391
ATMRAYAW 15.5249 7.79829 166.022
AAAVAAAA 15.6645 7.93258 164.26
GACHTTGN 15.106 7.71564 154.124
WTGTWTGY 14.1897 7.26901 143.092
TRWTTGCW 14.085 7.49521 128.185
TRKGTAHA 15.394 8.50192 127.071
AGKTCADR 16.7903 9.5745 126.971
GGDCRDAG 15.3853 8.56437 124.051
TTRCDTAD 12.104 6.33659 113.795
GGYGGSGS 6.71961 2.70626 110.407
AAAMAAAK 14.7919 8.52251 106.801
TTGYTTTK 13.3258 7.40326 106.651
GTYKACAR 10.5594 5.42738 103.325
AAWTMAAM 14.4341 8.38403 101.295
ACYTTGDM 15.2195 9.148 95.3568
TCRAYADY 14.8093 8.89611 93.0727
GRMCTCNG 15.2631 9.31403 91.0243
TTYGTTYG 6.10001 2.5964 89.9224
GTHCAMRG 13.2472 7.77248 89.2717
AGKTCABY 13.6487 8.10026 88.7404
AAGRHAAA 13.7097 8.18873 87.2493
GGNRGGMG 15.0188 9.28342 85.3386
GGSWDAGG 15.3678 9.58509 84.6425
GCGBKCGS 2.26896 0.506859 83.8278
CGCSBSCG 2.09442 0.442022 82.0864
ASGSWKAG 14.2421 8.81022 80.2805
TTKYTTTC 11.5193 6.66857 80.2763
RAGGVCAG 12.8196 7.68687 80.0565
GCCYBVGC 14.1025 8.71544 79.3275
GSKCASKG 14.7744 9.274 79.1145
TGSMCTTK 13.5178 8.28725 78.3836
TAAWCADY 15.3766 9.79691 78.0277
TCTGYCYY 14.9315 9.46415 77.095
GSASGMRG 14.757 9.32472 76.6324
TAAYCCYA 4.67755 1.88359 76.4455
ACTYRGNA 14.0501 8.80566 75.3259
TAVAYAKA 12.7847 7.81751 74.4956
TNRCTMAG 14.914 9.58633 72.8429
GYVCTBGG 14.3643 9.16281 71.6668
TCSVTBCS 12.2786 7.54308 69.7615
TTAWYTTD 15.1322 9.87417 69.585
ASGBASGR 12.8109 7.99273 69.3339
ARAYAAGR 13.1949 8.3196 68.7623
RTACRYAH 11.4321 6.94487 67.6585
AKSCCAGS 15.106 9.98265 65.826
GMCCTTTG 4.32848 1.82311 64.9192
AWTCVATB 10.4023 6.22094 64.6759
ASYGAGYB 14.5737 9.61478 63.7416
AACAAARM 11.4931 7.16408 61.9477
AAAMWGAA 10.9695 6.7514 61.7942
ACYCYRYC 12.8545 8.2955 60.9897
MTSGRATB 14.3381 9.52236 60.8468
CACSSMCV 11.7899 7.44397 60.6196
GCAHDCRC 11.1528 6.93492 60.1666
AAVWGAAA 14.5475 9.737 59.7367
GGGWHGGG 5.98656 3.0468 58.9719
CTTRGCWB 14.2421 9.52615 58.5445
ACRCRCAC 6.34436 3.31229 58.5158
CGCNCSGS 2.40859 0.764844 57.9938
TTGACATW 3.61288 1.48083 57.1153
WGMGRCVG 13.9628 9.38228 56.1389
TRCTWTGB 12.3746 8.09278 55.4273
CCDCCCCD 9.05838 5.44342 55.0521
TTDAYTSA 13.5788 9.10948 54.8648
AGKGMWSG 13.6836 9.20348 54.6867
ACCMCCAC 3.49943 1.45597 53.779
GRSGWHSG 12.8633 8.55767 53.6993
CRGCSTSS 11.3186 7.31744 52.8653
AAGTMCAH 7.29558 4.1483 52.7953
GAAYKSAH 13.0989 8.80582 52.288
AGAYRRAS 14.3555 9.86103 52.267
TCCBVMCC 12.872 8.69485 50.2199
TRYGTAYB 10.6641 6.88265 49.991
DGCGYKCG 1.68427 0.458461 49.8435
KYACTVTG 13.605 9.33569 49.5588
DGCCAANG 14.3381 9.95704 49.5263
CRBGCWSG 13.1949 8.97741 49.4473
GCCMGSCB 11.3273 7.45852 49.0314
GAGHYVGG 13.3869 9.17789 48.906
ATKAMCTH 8.87512 5.52009 47.6509
RAWKAAMG 13.1512 9.03208 47.5877
ATYGATYS 3.37726 1.47546 47.1398
RGCCBKGG 12.872 8.85523 46.1348
GAASSNAG 12.7149 8.75907 45.2396
AMTCRYTV 11.6415 7.86147 45.1852
TTARAAAW 8.10716 4.99413 44.9785
CWMKGTHG 13.8406 9.72589 44.9503
GSCKGGCY 10.3063 6.75686 44.7912
AKARTHAA 13.0901 9.10209 44.6118
CKCACTVN 13.6487 9.57847 44.5706
TWACCTWD 8.99729 5.73452 44.0326
AWGMAAAK 12.1477 8.33855 43.8296
GKASSKGG 10.9346 7.3393 43.4718
TGGMYTCD 13.3694 9.39485 43.3032
DACTYAGR 10.6292 7.11402 42.736
AMCKTTGN 12.3484 8.56209 42.5022
AKCWAWGY 12.8196 8.96574 42.3992
ADGAAMGR 11.3012 7.69483 42.1764
GGTTRGGG 2.5744 1.04608 41.5387
TAYSTARB 8.69186 5.58556 41.1403
AGAMHGRA 13.0552 9.22145 41.1258
ATTKACWM 9.45981 6.21277 41.069
GYCTHTGY 13.8581 9.93762 40.512
TRCCTYDG 13.0901 9.29413 40.1577
CGVMGCGS 1.597 0.496047 39.9655
TTSGHTTY 10.4808 7.10756 39.706
AACAAGVH 13.797 9.92443 39.6563
WATGMAAW 8.38642 5.39939 39.3655
ATMRAYAS 11.8509 8.29733 38.7997
GRCRGWGM 12.872 9.17181 38.7201
CRGGNCMG 12.4182 8.79439 38.477
TAARYACH 13.6487 9.86639 38.1595
AGACYWKG 9.25037 6.16076 37.8094
AAHKASAA 13.3083 9.60693 37.4274
GSRTGGWG 7.64465 4.87059 37.3323
CCWCCACS 4.17139 2.203 37.2968
GTSGGNGG 6.0651 3.62879 37.1453
TSSAWYTC 11.4582 8.03807 37.087
YGARTTCB 5.79457 3.42432 36.9883
ATSRMTBA 13.6225 9.9032 36.9134
GAAADGWM 13.3694 9.69871 36.6076
GCGRCSGN 1.78026 0.631123 36.5697
TAARAMWA 10.9521 7.65149 36.1047
CDGGGCTV 12.0866 8.62715 35.8956
TDTAATYM 9.19801 6.20074 35.635
RCARACRG 10.9695 7.68672 35.6318
GATTDCRD 8.63077 5.75114 35.1384
TGCNYGCY 11.2837 7.96922 34.7835
TYKGTADA 11.3797 8.0797 34.6385
KCCSAGCH 12.7062 9.2322 34.3788
ACCCTAAC 1.27411 0.37723 34.222
WCGHDCGC 1.43119 0.462503 33.987
GYKYGCAY 7.56611 4.93269 33.7077
CWTGTTYG 5.5764 3.3509 33.6625
AARRATBA 13.4741 9.93702 33.6233
AWSRTKAA 11.3622 8.11411 33.5581
TGAMCTRD 11.7637 8.45901 33.5476
CGKKMGSS 4.79972 2.75326 33.3912
GAKCRADS 12.6189 9.2054 33.3798
ACCRYVCC 6.23091 3.87828 33.1976
AAACSAAM 5.02662 2.94086 33.1858
TGTRTGYG 7.29558 4.75214 32.6112
ACRGWGCH 12.0691 8.78264 32.2935
GAAYNAAC 6.25709 3.93213 32.1716
GGGATTAM 2.11188 0.887947 32.1145
TACNCARY 11.5717 8.36505 32.0488
CTTTGDAD 12.3746 9.07972 31.644
TGAMCTYC 4.96553 2.93781 31.6149
RGACAKKG 9.32019 6.4742 31.4351
TTYGTTSW 9.32891 6.4638 31.3709
GGGGGGGG 1.80644 0.710732 31.1859
TVGWATKK 13.16 9.80277 30.9148
ARGAMARC 11.9644 8.76612 30.7975
RCMYAGTG 9.81761 6.9264 30.7125
GRSCGDCG 1.29156 0.418665 30.641
TASATAMR 4.67755 2.74749 30.5219
TRKCTTWG 8.31661 5.67202 30.5189
GCYAAGHB 13.3083 9.98096 30.0199
TCVGCCTC 3.28999 1.72968 29.9191
CGSKDCGS 1.91116 0.795975 29.6874
TBAMTGAR 12.2262 9.06378 29.4374
TTGDGYAA 8.56096 5.92505 29.3462
GGMWVSGG 12.5665 9.36631 29.3445
WMTTAACY 5.24479 3.22641 29.2015
WWSGMAMG 13.0552 9.80568 29.1515
GCTYRGYM 10.8299 7.8689 29.0979
RGGCBKGG 12.1564 9.03803 28.7684
AACCCTAA 1.50973 0.566538 28.4406
RKTCCARG 9.86997 7.08786 28.1819
CSTDGCKK 13.0203 9.84291 27.9243
WTMTTTGY 11.5804 8.59054 27.7175
CRCCACCR 2.99328 1.56791 27.5651
KRWCTAYR 11.9382 8.92157 27.3773
TCVBTWTC 10.6903 7.85416 26.9861
TGYCCTSK 11.8073 8.83293 26.8969
ATCBDYCT 10.3849 7.59632 26.8534
GASARAKG 12.1477 9.1504 26.559
AWTMGWAW 6.70216 4.49556 26.4871
TKACWTTY 11.3448 8.45038 26.485
RGCACTBR 10.795 7.97331 26.4414
AAAYATKR 12.7934 9.73081 26.3705
GRSSTKAG 11.5717 8.6618 26.2481
GGAHVGAM 10.699 7.90971 26.0611
GGAGMVMG 10.8735 8.08081 25.7018
AARGTACR 3.07182 1.66744 25.6787
DAGWCCAG 7.70573 5.36464 25.6738
AASAWCAA 6.59743 4.45301 25.3767
TGASATHR 9.50345 6.90962 25.3744
MYTAACCD 6.196 4.12283 25.3719
ACRCATAC 1.66681 0.708825 25.0193
CWVGRACK 12.2087 9.30944 24.7176
AACSAAHC 3.85723 2.28195 24.7162
TTYGAGAC 2.24278 1.09956 24.5948
TKCDTAKY 10.7863 8.06729 24.5427
CRCWCACS 5.76839 3.78883 24.5235
ACTTWGKK 8.5435 6.13041 24.462
TRAGCWAB 8.80531 6.36134 24.3229
ASGYABGY 9.64308 7.05645 24.3155
AGTAGCTG 1.80644 0.811952 24.2005
AGGAMGNR 12.9331 9.98603 24.1617
AHATRCAC 5.88184 3.92086 23.9263
AMSGWMGV 10.4634 7.79385 23.8268
TACRGWGN 10.507 7.86603 23.758
TBGCWMTG 11.2052 8.48229 23.6999
TTTMRAAA 8.07226 5.76521 23.6852
GCWCSGBG 3.07182 1.71811 23.5888
AKAMGRWA 9.04093 6.60413 23.5207
CGDCDBCG 1.77153 0.802105 23.3972
AGMGWWVG 12.296 9.47255 23.2836
GAGGNGSG 5.96911 4.01823 23.2719
KCBTCCKG 10.0009 7.45539 23.1786
ACSCMCCC 2.88856 1.59264 23.1713
GTWKACYR 9.01475 6.60811 23.0013
GDTSKTTG 10.5419 7.94403 22.9093
TAGCTGGG 1.87625 0.88579 22.5988
ASCYASGR 11.3535 8.67816 22.5886
GGBCRCMG 7.38284 5.23338 22.5262
CGRCCSGS 1.09085 0.392056 22.3438
WCCYBAGC 10.8212 8.22285 22.3337
ATYKWATY 8.08971 5.84667 22.3075
RACTMYGH 12.2 9.45389 22.2025
ATTDMRAA 11.6939 9.00792 22.127
CHGCWCBG 12.1738 9.40305 22.0486
ACTMAGNY 11.3797 8.73408 22.0435
TCSASSYC 9.59944 7.17061 21.9792
AGDGCRAR 10.4285 7.90662 21.8209
GCCSTNCS 5.96911 4.09342 21.432
CTTWGTTS 4.83463 3.16191 21.4043
AYARTGAH 9.71289 7.30664 21.3202
CSCMCCCR 4.5641 2.94643 21.3193
TGKCTKYC 11.9295 9.27229 21.2549
TTCYAKGW 9.19801 6.86157 21.2285
AKCCAAKH 10.2539 7.7899 21.1857
RGKGAMAG 11.1266 8.56404 21.1492
TGAMCCHR 11.5542 8.96066 20.8894
AMMTAASC 5.82075 3.99381 20.8652
WAGMWATS 10.2016 7.76529 20.8193
ARYGAWTK 8.16825 5.99793 20.6586
GTGBGGTG 4.10158 2.60388 20.513
DCSTTYCS 10.5419 8.08685 20.4735
TTCRAGGC 1.99843 1.01604 20.204
GCMCBGAS 6.16982 4.32072 20.0675
TWTMCATK 8.26425 6.11266 20.0609
WKCCTMSC 11.5368 8.9993 20.0426
ATRHAATW 8.45624 6.28326 19.99
TGNGCAYG 5.11388 3.44562 19.96
ACWGADAA 10.5507 8.12942 19.9061
TRATTYYA 7.23449 5.2345 19.8703
AARTTAAA 3.44707 2.11603 19.6136
CSTCSGSS 2.97583 1.74556 19.4475
DGCTCAGV 12.5316 9.93795 19.3694
CTTAWCTB 4.53792 3.002 19.2312
TCRKTVRC 9.69544 7.38173 19.1749
RTTCAKTD 9.5209 7.2683 19.0811
TTKAWTTG 5.49786 3.80264 19.0385
SCTTTSGN 11.4233 8.97047 18.9379
CRCRTGCN 6.79815 4.91899 18.703
GGDWMGAG 7.4352 5.46788 18.6877
RRCTACAK 6.6847 4.82487 18.6433
KGGGGWTG 4.38956 2.90697 18.5513
AGCWAWGR 8.09844 6.05862 18.4151
RGAAWTGV 11.3448 8.94059 18.3359
TSRCTCAY 6.75452 4.90302 18.2771
GYCACCRY 4.94808 3.3837 18.1264
GGWGANGG 7.62719 5.6663 18.0916
TSGGAVGV 11.3535 8.9676 18.0557
AACABTGM 8.58714 6.50828 18.035
CTGAGCHB 11.9469 9.50406 18.0304
KGWTGTTK 11.9557 9.51682 17.9615
KAACTWGR 5.35823 3.7337 17.9468
TGTCCHYA 7.2694 5.3658 17.9109
KTAWYTAR 9.1282 6.99872 17.8089
MWAGCAMK 11.6066 9.21339 17.7978
ATGTMBAC 3.44707 2.17658 17.7471
AAVGGAMR 11.7637 9.35876 17.7459
TAYMAAYA 7.75809 5.79943 17.7446
GCMATCYB 8.44751 6.4049 17.7075
CTGSGHAS 10.0358 7.82846 17.4394
CTYRGKAS 10.2365 8.0089 17.422
AAKGTCYW 7.26067 5.39347 17.2613
GCGGNGCY 2.56567 1.50437 17.2598
GSMCKTGM 8.45624 6.44518 17.1606
AATWMRGW 10.4372 8.20939 17.1125
TTHHCTTC 10.7165 8.46712 17.0094
GCCSMSGR 6.07383 4.38577 16.9712
TACRSACA 4.2063 2.82097 16.911
CCYCASCK 7.42648 5.56453 16.7822
TCKYWCTM 9.99215 7.84783 16.5644
GACMYAGR 8.02862 6.12007 16.3082
AGVSGKCG 2.24278 1.28602 16.2925
AAYMTTTG 6.52762 4.81615 16.1962
AGCKACKY 2.75766 1.68405 16.1893
AAGGVCAW 7.05123 5.27232 16.1653
TGRKYTYG 12.0604 9.74741 16.1184
TCSSMTCC 3.62161 2.37459 16.1141
GGGWGYGG 3.98813 2.67852 15.9906
TYGGGAGG 2.51331 1.50103 15.9771
TTGACASW 6.95523 5.19948 15.9742
TGCCYKKC 8.88385 6.89981 15.945
AGKTSRCA 8.24679 6.33605 15.926
WGGKTCRK 9.57326 7.52658 15.7733
ATTAMAGG 2.82747 1.75278 15.7443
AATTMKTW 4.86081 3.39712 15.6414
GGKTCAKD 9.75652 7.70727 15.5361
TTGCRWCA 3.07182 1.95324 15.5348
GGGCTABR 3.82232 2.56154 15.511
RTSGTATG 1.38756 0.683603 15.4726
ATRAMGAW 4.80845 3.38594 15.422
ARVCACYG 11.7026 9.47595 15.4145
AAAKGSAW 10.3325 8.23701 15.3763
CATVCVTK 10.2016 8.12211 15.3325
TGCDTWCN 11.6415 9.38071 15.2706
GGWAGWGR 8.16825 6.31146 15.2147
YCACCATS 3.72633 2.49548 15.1924
AWMTATAM 4.49428 3.13374 15.162
TAAMGHWA 6.97269 5.26295 15.1353
TGMAATSY 7.4003 5.63839 15.1313
TGGAHMGA 4.79972 3.39385 15.0938
TAACYAHY 5.76839 4.22539 14.9888
GHTCTKRG 11.4321 9.26284 14.9875
ACTGWAKV 9.31146 7.34647 14.9831
TACMMADG 11.4844 9.31315 14.9537
WTTGGMTY 8.4126 6.55155 14.8609
GHKCRKAG 10.9172 8.80814 14.8139
GGHAGHMG 11.1703 9.04326 14.7475
ARGACADG 7.3043 5.5829 14.6564
TGTCSTWS 4.58155 3.23081 14.6429
WYACVGAG 10.1841 8.15815 14.6249
TCWCCWSC 10.4547 8.40722 14.5689
AGGCWARS 9.18056 7.25893 14.5559
GMAGNTSG 10.219 8.1981 14.5126
TVYGTTYG 8.49987 6.6589 14.4198
TMRACAGG 5.21861 3.78376 14.404
AWARTMKA 8.55223 6.70732 14.3955
AATYCTAR 2.79256 1.78022 14.0955
GCCHSGTS 7.69701 5.97154 14.0057
GTASVTAG 2.11188 1.25064 13.9777
MGTCYATS 3.31617 2.20988 13.9208
TCRCTBGV 8.17698 6.40594 13.8999
GGAGGAKC 2.51331 1.5657 13.8872
GMTSRCTY 11.8422 9.67024 13.8824
AGAAAAVA 8.14207 6.38463 13.7554
ATTGCRWC 1.64936 0.908534 13.7504
VCTGGGCV 9.55581 7.66409 13.6336
RTCSMTGS 7.74064 6.03498 13.6327
CCKCCCKK 5.48041 4.04994 13.6277
AGSAMGSY 11.72 9.63896 13.5906
GDYGGYMG 7.58356 5.90341 13.5098
TRAKTMAS 10.2278 8.28399 13.4952
GGBAGGTR 5.47168 4.05501 13.3977
GGBCATSG 3.56925 2.44076 13.3693
TTRRGAMA 9.99215 8.0802 13.3637
KTSGTTRG 3.76996 2.60898 13.3393
GTCCWYTG 4.73863 3.42847 13.3192
RAGTBCTR 11.5281 9.48627 13.3133
AGTTAAYS 2.23405 1.36612 13.2785
GAMHGAAK 8.04608 6.33302 13.2594
TTGATYBC 4.67755 3.37995 13.2468
AGGAKSSR 11.275 9.26563 13.1785
RVAATKAG 9.73034 7.87452 12.9536
WCSGRNCG 1.81517 1.04445 12.9136
CKYGGCCB 4.91317 3.59939 12.9096
GGRMRATG 6.84178 5.28688 12.8729
WAGGTTAK 2.60058 1.66976 12.8675
GAMAADCR 9.91361 8.06383 12.6691
RTTYGWAY 6.99014 5.43352 12.643
RCKGCCCK 4.49428 3.25427 12.6385
CCRSGMAS 9.98342 8.13687 12.5526
CAAGSCWR 11.2924 9.33566 12.5466
AACYCMAR 9.85252 8.01965 12.5271
TAGKTCAV 3.96195 2.80805 12.5113
TYKAACCY 5.53277 4.1584 12.5104
YCCRAGTN 8.83149 7.09525 12.4958
AGCMTRGW 8.12462 6.46019 12.4631
TTGGMTMN 11.6328 9.65652 12.4583
GDACSTTG 2.88856 1.91808 12.4525
ATTAKSMA 5.49786 4.13154 12.4489
GGWCRGCS 3.7176 2.60654 12.418
TCRATACH 2.55694 1.65172 12.3926
GCGYSGGG 1.0123 0.485653 12.2919
ATGCDTRC 2.52204 1.62865 12.2545
YRTCACYR 8.7704 7.02694 12.0063
AGTGMGRY 4.40702 3.21563 11.9409
WCGCVBCG 1.06467 0.528829 11.9214
TCHSSTTC 8.79658 7.11118 11.8823
ACAARMYA 11.3884 9.48386 11.8721
CGADCSVG 1.78899 1.06408 11.863
CCACTGHS 6.92032 5.427 11.8209
AGSKYGGG 5.14879 3.871 11.6977
TCRAYAKA 4.18012 3.03453 11.6845
TTSGCAKN 10.6379 8.80977 11.683
MGCHATCB 6.31818 4.90283 11.6506
CTWCGKWD 3.20272 2.21063 11.6418
ACAGADHG 10.7165 8.89485 11.5384
GACVTMRY 7.34794 5.83027 11.5307
GAMSGMKG 6.09128 4.70995 11.5263
TAGMMWAG 5.69858 4.36525 11.494
CRGAHGCV 7.76682 6.21187 11.4666
CGBMWCGS 1.58827 0.914719 11.3727
ATAGWAWB 6.08256 4.71247 11.3701
GTYMGAGK 4.98298 3.74623 11.3594
GRVCTKCG 2.64421 1.76629 11.2355
WTSCTAWC 4.19757 3.07469 11.2044
GATCTCDG 2.76638 1.86997 11.152
AAAAAAWC 4.80845 3.60837 11.1159
AASCAARA 6.21346 4.84794 11.0818
ACACCMCC 2.97583 2.04757 11.051
RGCCVGWG 10.123 8.39362 11.0393
CYTAGAHB 8.30788 6.735 11.0351
RBCDTCGK 4.05795 2.93594 11.0331

Parameters

Search parameters Motif filtering Positive sequences Open Contrast sequences Open Statistic parameters Add first run - exclude sequence if motif found
parameters in ini format

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